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Authors whose works are in public domain in at least one jurisdiction

List of works by Andreas Wilm

A benchmark of multiple sequence alignment programs upon structural RNAs

scientific article

A randomized, double-blind placebo controlled trial of balapiravir, a polymerase inhibitor, in adult dengue patients

scientific article

An enhanced RNA alignment benchmark for sequence alignment programs

scientific article

Analysis of Dengue Virus Genetic Diversity during Human and Mosquito Infection Reveals Genetic Constraints

scientific article

BAsE-Seq: a method for obtaining long viral haplotypes from short sequence reads

scientific article

BlastR--fast and accurate database searches for non-coding RNAs

scientific article

Clustal W and Clustal X version 2.0

scientific article (publication date: November 2007)

ConStruct: Improved construction of RNA consensus structures

scientific article published on 28 April 2008

Direct whole-genome deep-sequencing of human respiratory syncytial virus A and B from Vietnamese children identifies distinct patterns of inter- and intra-host evolution

scientific article published on 25 September 2015

Draft Genome Sequence of Polychlorinated Biphenyl-Dechlorinating Dehalococcoides mccartyi Strain SG1, Which Carries a Circular Putative Plasmid

scientific article

Fast and sensitive mapping of nanopore sequencing reads with GraphMap

scientific article published on 15 April 2016

Fast embedding methods for clustering tens of thousands of sequences

scientific article published on 26 March 2008

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

scientific article (publication date: 11 October 2011)

Genomic characterization of three unique Dehalococcoides that respire on persistent polychlorinated biphenyls

scientific article

High DNA melting temperature predicts transcription start site location in human and mouse

scientific article published on December 2009

INC-Seq: accurate single molecule reads using nanopore sequencing

scientific article published on 02 August 2016

In Vivo Mapping of Eukaryotic RNA Interactomes Reveals Principles of Higher-Order Organization and Regulation

scientific article published on 11 May 2016

LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets

scientific article

Making automated multiple alignments of very large numbers of protein sequences

scientific article published on 21 February 2013

Next-generation whole genome sequencing of dengue virus

scientific article published on January 2014

R-Coffee: a method for multiple alignment of non-coding RNA

scientific article

R-Coffee: a web server for accurately aligning noncoding RNA sequences

scientific article

STRAL: progressive alignment of non-coding RNA using base pairing probability vectors in quadratic time

scientific article

Sequence embedding for fast construction of guide trees for multiple sequence alignment

scientific article published on 14 May 2010

Single-virion sequencing of lamivudine-treated HBV populations reveal population evolution dynamics and demographic history

scientific article published on 27 October 2017

Species identification and profiling of complex microbial communities using shotgun Illumina sequencing of 16S rRNA amplicon sequences

scientific article

Tissue Microbiome Profiling Identifies an Enrichment of Specific Enteric Bacteria in Opisthorchis viverrini Associated Cholangiocarcinoma

scientific article

Tracking Dengue Virus Intra-host Genetic Diversity during Human-to-Mosquito Transmission

scientific article published on September 2015

Whole metagenome profiling reveals skin microbiome-dependent susceptibility to atopic dermatitis flare

scientific article published on 11 July 2016

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