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List of works by Jean-François Brugère

A catalogue of 1,167 genomes from the human gut archaeome

scientific article published on 30 December 2021

A putative new order of methanogenic Archaea inhabiting the human gut, as revealed by molecular analyses of the mcrA gene

scientific article published on 2 July 2008

ASaiM: a Galaxy-based framework to analyze microbiota data.

scientific article

Archaea and the human gut: new beginning of an old story.

scientific article

Archaea, specific genetic traits, and development of improved bacterial live biotherapeutic products: another face of next-generation probiotics

scientific article published on 12 April 2020

Archaea: Microbial Candidates in Next-generation Probiotics Development

scientific article published on 01 November 2018

Archaebiotics: proposed therapeutic use of archaea to prevent trimethylaminuria and cardiovascular disease

scientific article

Characterisation and expression of phospholipases B from the opportunistic fungus Aspergillus fumigatus.

scientific article published on October 2004

Colonic Transit Time Is a Driven Force of the Gut Microbiota Composition and Metabolism: In Vitro Evidence.

scientific article published on 16 August 2016

Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine

scientific article

Comparative genomics of microsporidian genomes reveals a minimal non-coding RNA set and new insights for transcription in minimal eukaryotic genomes.

scientific article

Corrigendum to "unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette".

scientific article published on 2 February 2015

Design and validation of a colorimetric test for the genetic diagnosis of hemochromatosis using α-phosphorothioate nucleotides

scientific article published on 15 May 2013

Encephalitozoon cuniculi (Microspora) genome: physical map and evidence for telomere-associated rDNA units on all chromosomes.

scientific article

Fecal microbiota variation across the lifespan of the healthy laboratory rat

scientific article published on 06 June 2017

Functional amplification and preservation of human gut microbiota

scientific article

Genome Sequence of "Candidatus Methanomassiliicoccus intestinalis" Issoire-Mx1, a Third Thermoplasmatales-Related Methanogenic Archaeon from Human Feces.

scientific article published on 11 July 2013

Genomics and metagenomics of trimethylamine-utilizing Archaea in the human gut microbiome.

scientific article published on 06 June 2017

In vitro maintenance of a human proximal colon microbiota using the continuous fermentation system P-ECSIM

scientific article published on 20 July 2011

In vitro susceptibility of Aspergillus spp. clinical isolates to albendazole

scientific article published on 25 April 2003

In-vitro model for studying methanogens in human gut microbiota.

scientific article published on 14 April 2015

Inter-strain variability of insertion/deletion events in the Encephalitozoon cuniculi genome: a comparative KARD-PFGE analysis

scientific article published on 01 January 2001

Methanomethylophilus alvi gen. nov., sp. nov., a Novel Hydrogenotrophic Methyl-Reducing Methanogenic Archaea of the Order Methanomassiliicoccales Isolated from the Human Gut and Proposal of the Novel Family Methanomethylophilaceae fam. nov.

scientific article published in 2023

Molecular evaluation of the human gut methanogenic archaeal microbiota reveals an age-associated increase of the diversity

scientific article published on 21 December 2009

Molecular methods for studying methanogens of the human gastrointestinal tract: current status and future directions.

scientific article published on 19 June 2015

PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification.

scientific article published on 26 April 2014

Single-tube genotyping using a solid-phase method that combines alpha-phosphorothioate-mediated primer extension and ExoIII: proof of concept with the F508del cystic fibrosis diagnosis

scientific article published on 08 July 2008

The host-associated archaeome

scientific article published on 20 July 2020

The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family level

scientific article

Three-stage continuous culture system with a self-generated anaerobia to study the regionalized metabolism of the human gut microbiota.

scientific article

Unique characteristics of the pyrrolysine system in the 7th order of methanogens: implications for the evolution of a genetic code expansion cassette

scientific article published on 27 January 2014

Whole Rye Consumption Improves Blood and Liver n-3 Fatty Acid Profile and Gut Microbiota Composition in Rats

scientific article

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