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List of works by Dean P. Jones

A Network Perspective on Metabolism and Aging ⬇️

scientific article published on July 12, 2010

A SCORE COMPRISED OF NOVEL METABOLITES RELATED TO MYOCARDIAL ENERGETICS IS ASSOCIATED WITH SEX DISPARITIES IN HEART FAILURE OUTCOMES

scholarly article

A Small Molecule Solution to the Vexing Problem of Restenosis: Predicting Restenosis

scientific article published on 01 July 2017

A Sulfur Amino Acid–Free Meal Increases Plasma Lipids in Humans ⬇️

scientific article published on June 15, 2011

A biplot correlation range for group-wise metabolite selection in mass spectrometry

scientific article published on 04 February 2019

A key role for mitochondria in endothelial signaling by plasma cysteine/cystine redox potential.

scientific article

A longitudinal analysis of the effects of age on the blood plasma metabolome in the common marmoset, Callithrix jacchus.

scientific article published on 21 January 2016

A metabolomic study of cervical dystonia

scientific article published on 26 November 2020

A precision medicine approach to defining the impact of doxorubicin on the bioenergetic-metabolite interactome in human platelets

scientific article published on 07 September 2019

A rapid LC-FTMS method for the analysis of cysteine, cystine and cysteine/cystine steady-state redox potential in human plasma

scientific article published on 27 June 2008

A scalable workflow to characterize the human exposome

scientific article published on 22 September 2021

ADAP-GC 3.2: Graphical Software Tool for Efficient Spectral Deconvolution of Gas Chromatography-High-Resolution Mass Spectrometry Metabolomics Data.

scientific article

ADAP-GC 4.0: Application of Clustering-Assisted Multivariate Curve Resolution to Spectral Deconvolution of Gas Chromatography-Mass Spectrometry Metabolomics Data

scientific article published on 05 July 2019

Abstract 656: High resolution metabolomics of aspirin treatment in colon tissue and adenoma risk: Results from a randomized clinical trial

scholarly article

Acetaminophen elimination half-life in humans is unaffected by short-term consumption of sulfur amino acid-free diet

scientific article

Actin cytoskeleton redox proteome oxidation by cadmium

scientific article published on 27 September 2013

Addressing the batch effect issue for LC/MS metabolomics data in data preprocessing

scientific article published on 17 August 2020

Advances in Comprehensive Exposure Assessment: Opportunities for the US Military

scientific article published on 01 December 2019

After cellular internalization, quercetin causes Nrf2 nuclear translocation, increases glutathione levels, and prevents neuronal death against an oxidative insult

scientific journal article

Air Pollution and Adverse Pregnancy and Birth Outcomes: Mediation Analysis Using Metabolomic Profiles

scientific article published on 08 August 2020

Alcohol induces mitochondrial redox imbalance in alveolar macrophages

scientific article published on 16 October 2013

Alterations in immune and renal biomarkers among workers occupationally exposed to low levels of trichloroethylene below current regulatory standards

scientific article published on 10 April 2019

Amino Acid Metabolism is Altered in Adolescents with Nonalcoholic Fatty Liver Disease-An Untargeted, High Resolution Metabolomics Study

scientific article published on 05 February 2016

Analysis of Postdeployment Serum Samples Identifies Potential Biomarkers of Exposure to Burn Pits and Other Environmental Hazards

scientific article published on 01 December 2019

Antioxidant micronutrients and biomarkers of oxidative stress and inflammation in colorectal adenoma patients: results from a randomized, controlled clinical trial

scientific article published on 3 March 2010

Antioxidant supplements prevent oxidation of cysteine/cystine redox in patients with age-related macular degeneration

scientific article

Application of high-resolution metabolomics to identify biological pathways perturbed by traffic-related air pollution

scientific article published on 24 November 2020

Are plasma citrulline and glutamine biomarkers of intestinal absorptive function in patients with short bowel syndrome?

scientific article published on 01 January 2007

Arginine and Carnitine Metabolites Are Altered in Diabetic Retinopathy

scientific article published on 01 July 2019

Association between novel oxidative stress markers and C-reactive protein among adults without clinical coronary heart disease

scientific article published on 01 January 2005

Association between oxidative stress and atrial fibrillation.

scientific article

Associations Between Primary Traffic Pollution And Metabolomic Response Patterns In The Dorm Room Inhalation To Vehicle Emissions (Drive) Study ⬇️

scholarly article

Associations between Exposure to Persistent Organic Pollutants and Subsequent Body Composition Response to Bariatric Surgery

scholarly article published on 17 September 2023

Associations of Benzo(ghi)perylene and Heptachlorodibenzo-p-dioxin in Serum of Service Personnel Deployed to Balad, Iraq, and Bagram, Afghanistan Correlates With Perturbed Amino Acid Metabolism in Human Lung Fibroblasts

scientific article published on 01 December 2019

Associations of plasma-soluble fas ligand with aging and age-related macular degeneration

scientific article published on 01 April 2008

Benzo[a]pyrene Perturbs Mitochondrial and Amino Acid Metabolism in Lung Epithelial Cells and Has Similar Correlations With Metabolic Changes in Human Serum

scientific article published on 01 December 2019

Cadmium stimulates myofibroblast differentiation and mouse lung fibrosis

scientific article published on 21 March 2017

Cardio-metabolic profile is a determinant of carotid artery disease quantified by Magnetic Resonance Imaging

Cardiovascular Risk and Resilience Among Black Adults: Rationale and Design of the MECA Study

scientific article published on 28 April 2020

Characterization of apical and basal thiol-disulfide redox regulation in human colonic epithelial cells

scientific article

Characterization of plasma thiol redox potential in a common marmoset model of aging.

scientific article published on 18 July 2013

Children with NAFLD are more sensitive to the adverse metabolic effects of fructose beverages than children without NAFLD.

scientific article

Children with severe asthma have unique oxidative stress-associated metabolomic profiles

scientific article published on January 2014

Chronic psychological stress and high-fat high-fructose diet disrupt metabolic and inflammatory gene networks in the brain, liver, and gut and promote behavioral deficits in mice

scientific article published in September 2016

Clustering Based on Periodicity in High-Throughput Time Course Data

scientific article

Commensal Propionibacterium strain UF1 mitigates intestinal inflammation via Th17 cell regulation.

scientific article published on 25 September 2017

Commensal bacteria modulate cullin-dependent signaling via generation of reactive oxygen species

scientific article

Comparative effects of glucagon-like peptide-2 (GLP-2), growth hormone (GH), and keratinocyte growth factor (KGF) on markers of gut adaptation after massive small bowel resection in rats.

scientific article published on November 2004

Comparative transcriptomics and metabolomics in a rhesus macaque drug administration study.

scientific article

Compartmentation of Nrf-2 redox control: regulation of cytoplasmic activation by glutathione and DNA binding by thioredoxin-1.

scientific article

Computational Metabolomics: A Framework for the Million Metabolome

scientific article published on 14 September 2016

Constitutive Activation of Nrf2 Causes Hyper-Reductive State and Heart Failure

scholarly article by Gobinath Shanmugam published in November 2017

Control of extracellular cysteine/cystine redox state by HT-29 cells is independent of cellular glutathione

scientific article published on 13 June 2007

Controlling the False Discovery Rate for Feature Selection in High-resolution NMR Spectra.

scientific article

Correction to: Air Pollution and Adverse Pregnancy and Birth Outcomes: Mediation Analysis Using Metabolomic Profiles

scientific article published on 04 December 2020

Correction: Metabolic Characterization of the Common Marmoset (Callithrix jacchus).

scientific article published on 22 January 2016

Correlation of the lung microbiota with metabolic profiles in bronchoalveolar lavage fluid in HIV infection

scientific article published on 20 January 2016

Corrigendum to "Plasma metabolomics in adults with cystic fibrosis during a pulmonary exacerbation: A pilot randomized study of high-dose vitamin D3 administration" [Metabolism vol. 70, May 2017, pages 31-41].

scientific article published on 26 April 2017

Cross-species metabolomic analysis of tau- and DDT-related toxicity

scientific article published on 01 May 2022

Cysteine redox potential determines pro-inflammatory IL-1beta levels

scientific article

Cysteine starvation activates the redox-dependent mitochondrial permeability transition in retinal pigment epithelial cells

scientific article published in November 2004

Cysteine/cystine couple is a newly recognized node in the circuitry for biologic redox signaling and control

scientific article

Cysteine/cystine redox signaling in cardiovascular disease

scientific article

Defective metabolic programming impairs early neuronal morphogenesis in neural cultures and an organoid model of Leigh syndrome

scientific article published on 26 March 2021

Depletion of plasma antioxidants in surgical intensive care unit patients requiring parenteral feeding: effects of parenteral nutrition with or without alanyl-glutamine dipeptide supplementation

scientific article published on January 2008

Deployment-Associated Exposure Surveillance With High-Resolution Metabolomics

scientific article

Depressive Symptoms and Subclinical Vascular Disease: The Role of Regular Physical Activity

scientific article published in January 2016

Detailed mitochondrial phenotyping by high resolution metabolomics

scientific article

Detectable serum flagellin and lipopolysaccharide and upregulated anti-flagellin and lipopolysaccharide immunoglobulins in human short bowel syndrome

scientific article

Determination of ebselen-sensitive reactive oxygen metabolites (ebROM) in human serum based upon N,N'-diethyl-1,4-phenylenediamine oxidation

scientific article published on 8 June 2012

Determination of thiocyanate in exhaled breath condensate

scientific article published on 22 August 2018

Development of a Plasma Screening Panel for Pediatric Nonalcoholic Fatty Liver Disease Using Metabolomics

scientific article published on 13 August 2019

Dieldrin exposure induces oxidative damage in the mouse nigrostriatal dopamine system.

scientific article published on 5 January 2007

Dietary glutamine and oral antibiotics each improve indexes of gut barrier function in rat short bowel syndrome

scientific article published on 18 December 2008

Dietary sulfur amino acid effects on fasting plasma cysteine/cystine redox potential in humans.

scientific article

Dietary sulfur amino acid supplementation reduces small bowel thiol/disulfide redox state and stimulates ileal mucosal growth after massive small bowel resection in rats

scientific article published on 14 October 2009

Dietary supplementation with orotate and uracil increases adaptive growth of jejunal mucosa after massive small bowel resection in rats

scientific article published in September 2005

Differences in plasma metabolites related to Alzheimer's disease, APOE ε4 status, and ethnicity

scientific article published on 06 May 2020

Differences in systemic oxidative stress based on race and the metabolic syndrome: the Morehouse and Emory Team up to Eliminate Health Disparities (META-Health) study

scientific article

Differential effects of nebivolol and metoprolol on arterial stiffness, circulating progenitor cells, and oxidative stress.

scientific article published on 31 December 2014

Differential oxidation of thioredoxin-1, thioredoxin-2, and glutathione by metal ions

scientific article

Differential regulation of tissue thiol-disulfide redox status in a murine model of peritonitis ⬇️

scientific article published on October 4, 2012

Discovery of metabolic alterations in the serum of patients infected with Plasmodium spp. by high-resolution metabolomics

scientific article published on 23 December 2019

Discovery of metabolite features for the modelling and analysis of high-resolution NMR spectra

scientific article published on January 2008

Distinct amino acid and lipid perturbations characterize acute versus chronic malaria

scientific article

Distribution of phytochelatins, metal-binding compounds, in plant foods: A survey of commonly consumed fruits, vegetables, grains and legumes

scientific article published on 10 September 2020

Disturbed flow enhances inflammatory signaling and atherogenesis by increasing thioredoxin-1 level in endothelial cell nuclei

scientific article

Disturbed flow induces systemic changes in metabolites in mouse plasma: a metabolomics study using ApoE⁻/⁻ mice with partial carotid ligation

scientific article

Diurnal variation in glutathione and cysteine redox states in human plasma

scientific article published in October 2007

Divergent mechanisms of paraquat, MPP+, and rotenone toxicity: oxidation of thioredoxin and caspase-3 activation

scientific article published on 3 October 2006

Dysregulated lipid and fatty acid metabolism link perfluoroalkyl substances exposure and impaired glucose metabolism in young adults

scientific article published on 03 September 2020

Early Pregnancy Serum Metabolite Profiles Associated with Hypertensive Disorders of Pregnancy in African American Women: A Pilot Study

scientific article published on 19 February 2020

Effect of Angiotensin II Type I Receptor Blockade with Valsartan on Carotid Artery Atherosclerosis: A Double Blind Randomized Clinical Trial Comparing Valsartan and Placebo (EFFERVESCENT)

scientific article published on 18 January 2016

Effect of Bone Marrow-Derived Mesenchymal Stem Cells on Endotoxin-Induced Oxidation of Plasma Cysteine and Glutathione in Mice ⬇️

scientific article published on March 8, 2010

Effects of age, sex, and genotype on high-sensitivity metabolomic profiles in the fruit fly, Drosophila melanogaster.

scientific article

Effects of long-term zinc supplementation on plasma thiol metabolites and redox status in patients with age-related macular degeneration

scientific article

Efficacy and Safety of Glutamine-supplemented Parenteral Nutrition in Surgical ICU Patients: An American Multicenter Randomized Controlled Trial.

scientific article published on 22 October 2015

Efficacy of parenteral nutrition supplemented with glutamine dipeptide to decrease hospital infections in critically ill surgical patients

scientific article

Endothelial function and aminothiol biomarkers of oxidative stress in healthy adults

scientific article published on 26 May 2008

Enhanced Keap1-Nrf2 signaling protects the myocardium from isoproterenol-induced pathological remodeling in mice

scientific article published on 04 May 2019

Environmental Cadmium Enhances Lung Injury by Respiratory Syncytial Virus Infection

scientific article published on 18 May 2019

Environmental Chemicals Altered in Association With Deployment for High Risk Areas

scientific article published on 01 December 2019

Environmental chemical burden in metabolic tissues and systemic biological pathways in adolescent bariatric surgery patients: A pilot untargeted metabolomic approach

scientific article published on 16 July 2020

Environmental chemicals and metabolic disruption in primary and secondary human parathyroid tumors

scientific article published on 05 August 2020

Exposure Memory and Lung Regeneration

scientific article published on December 2016

Exposure to Heptachlorodibenzo-p-dioxin (HpCDD) Regulates microRNA Expression in Human Lung Fibroblasts

scientific article published on 01 December 2019

Exposure to per- and polyfluoroalkyl substances and plasma proteomics in young adults: The Meta-AIR study

scholarly article published on 17 September 2023

Extracellular cysteine/cystine redox potential controls lung fibroblast proliferation and matrix expression through upregulation of transforming growth factor-beta

scientific article published on 20 July 2007

Extracellular cysteine/cystine redox regulates the p44/p42 MAPK pathway by metalloproteinase-dependent epidermal growth factor receptor signaling

scientific article published on 3 March 2005

Extracellular thiol/disulfide redox state affects proliferation rate in a human colon carcinoma (Caco2) cell line

scientific article published on December 2002

Firsthand and Secondhand Exposure Levels of Maltol-Flavored Electronic Nicotine Delivery System Vapors Disrupt Amino Acid Metabolism

scientific article published on 01 July 2021

From the Cover: Manganese Stimulates Mitochondrial H2O2 Production in SH-SY5Y Human Neuroblastoma Cells Over Physiologic as well as Toxicologic Range

scientific article

Gene and protein responses of human monocytes to extracellular cysteine redox potential

scientific article published on 11 September 2009

Genetic algorithm-based feature selection in high-resolution NMR spectra.

scientific article

Genetic or Toxicant-Induced Disruption of Vesicular Monoamine Storage and Global Metabolic Profiling in Caenorhabditis elegans

scientific article published on 01 April 2021

Glutamine Prevents Cytokine-Induced Apoptosis in Human Colonic Epithelial Cells ⬇️

scientific article published on October 1, 2003

Glutamine and KGF each regulate extracellular thiol/disulfide redox and enhance proliferation in Caco-2 cells

scientific article published on 28 August 2003

Glutamine inhibits cytokine-induced apoptosis in human colonic epithelial cells via the pyrimidine pathway

scientific article published on 5 May 2005

Glutathione and thioredoxin redox during differentiation in human colon epithelial (Caco-2) cells

scientific article published in December 2002

Glutathione depletion enforces the mitochondrial permeability transition and causes cell death in Bcl-2 overexpressing HL60 cells

scientific article

Glutathione redox control of asthma: from molecular mechanisms to therapeutic opportunities

scientific article

Gut-Resident Lactobacilli Activate Hepatic Nrf2 and Protect Against Oxidative Liver Injury

scientific article published on 18 March 2020

H2O2-dependent activation of GCLC-ARE4 reporter occurs by mitogen-activated protein kinase pathways without oxidation of cellular glutathione or thioredoxin-1.

scientific article published on 24 November 2003

HIV-1 transgene expression in rats causes oxidant stress and alveolar epithelial barrier dysfunction

scientific article published on 4 February 2009

HIV-1-induced pulmonary oxidative and nitrosative stress: exacerbated response to endotoxin administration in HIV-1 transgenic mouse model

scientific article published on 25 May 2006

Hepatic fat is a stronger correlate of key clinical and molecular abnormalities than visceral and abdominal subcutaneous fat in youth

scientific article published on 01 July 2020

Hepatic oxidative stress in fructose-induced fatty liver is not caused by sulfur amino acid insufficiency

scientific article published on 18 November 2011

High habitual dietary alpha-linolenic acid intake is associated with decreased plasma soluble interleukin-6 receptor concentrations in male twins

scientific article

High-Resolution Exposomics and Metabolomics Reveals Specific Associations in Cholestatic Liver Diseases

scientific article published on 26 November 2021

High-Resolution Metabolomics Assessment of Military Personnel: Evaluating Analytical Strategies for Chemical Detection.

scientific article published on August 2016

High-Resolution Metabolomics for Nutrition and Health Assessment of Armed Forces Personnel.

scientific article

High-Resolution Metabolomics: Review of the Field and Implications for Nursing Science and the Study of Preterm Birth

scientific article

High-performance metabolic profiling of plasma from seven mammalian species for simultaneous environmental chemical surveillance and bioeffect monitoring.

scientific article

High-performance metabolic profiling with dual chromatography-Fourier-transform mass spectrometry (DC-FTMS) for study of the exposome.

scientific article published in March 2013

High-resolution metabolomic profiling of Alzheimer's disease in plasma

scientific article published on 11 December 2019

High-resolution metabolomics of occupational exposure to trichloroethylene

scientific article published on 05 October 2016

High-resolution metabolomics to discover potential parasite-specific biomarkers in a Plasmodium falciparum erythrocytic stage culture system

scientific article

High-resolution metabolomics to identify urine biomarkers in corticosteroid-resistant asthmatic children.

scientific article published on 19 September 2016

High-resolution plasma metabolomics analysis to detect Mycobacterium tuberculosis-associated metabolites that distinguish active pulmonary tuberculosis in humans

scientific article published in PLoS ONE

Higher Mediterranean Diet Quality Scores and Lower Body Mass Index Are Associated with a Less-Oxidized Plasma Glutathione and Cysteine Redox Status in Adults

scientific article published on 01 February 2018

Honokiol blocks and reverses cardiac hypertrophy in mice by activating mitochondrial Sirt3

scientific article published on 14 April 2015

Human Suction Blister Fluid Composition Determined Using High-Resolution Metabolomics.

scientific article published on 9 February 2018

Hybrid feature detection and information accumulation using high-resolution LC-MS metabolomics data

scientific article

Identification of thioredoxin-2 as a regulator of the mitochondrial permeability transition

scientific article published on 11 June 2008

Improving peak detection in high-resolution LC/MS metabolomics data using preexisting knowledge and machine learning approach

scientific article

Increased Inflammatory Signaling and Lethality of Influenza H1N1 by Nuclear Thioredoxin-1 ⬇️

scientific article published on April 15, 2011

Increased Nuclear Thioredoxin-1 Potentiates Cadmium-Induced Cytotoxicity ⬇️

scientific article published on September 7, 2012

Increased mitochondrial thioredoxin 2 potentiates N-ethylmaleimide-induced cytotoxicity

scientific article

Increased oxidant-induced apoptosis in cultured nondividing human retinal pigment epithelial cells

scientific article

Individual variation in macronutrient regulation measured by proton magnetic resonance spectroscopy of human plasma.

scientific article published on 20 May 2009

Inflammation is related to coronary flow reserve detected by positron emission tomography in asymptomatic male twins

scientific article

Innovative Method For Examining Traffic Pollution Exposures And Acute Biological Effects In Commuter Panel Studies ⬇️

scholarly article

Integrated redox proteomics and metabolomics of mitochondria to identify mechanisms of cd toxicity

scientific article

Integration of Multi-Omics Data Reveal Dynamic Oxidative Stress Responses to Manganese in Human SH-SY5Y Neuroblastoma Cells

article

Integrative Network Analysis Linking Clinical Outcomes With Environmental Exposures and Molecular Variations in Service Personnel Deployed to Balad and Bagram

scientific article published on 01 December 2019

Integrative interactomics applied to bovine fescue toxicosis

scientific article published on 22 March 2022

Integrative metabolomics and transcriptomics signatures of clinical tolerance to Plasmodium vivax reveal activation of innate cell immunity and T cell signaling

scientific article published on 11 April 2018

Integrative omics-defined redox, metabolic and functional responses to environmental metal exposure

article

Intestinal redox status of major intracellular thiols in a rat model of chronic alcohol consumption

scientific article

Intracellular proatherogenic events and cell adhesion modulated by extracellular thiol/disulfide redox state

scientific article published on 31 May 2005

Introduction to Department of Defense Research on Burn Pits, Biomarkers, and Health Outcomes Related to Deployment in Iraq and Afghanistan.

scientific article published on August 2016

Invariance and plasticity in the Drosophila melanogaster metabolomic network in response to temperature

scientific article

Lipocalin 2 deficiency dysregulates iron homeostasis and exacerbates endotoxin-induced sepsis.

scientific article

Local false discovery rate estimation using feature reliability in LC/MS metabolomics data

scientific article

Local glutathione redox status does not regulate ileal mucosal growth after massive small bowel resection in rats

scientific article published on 01 February 2007

Long-term exposure to AZT, but not d4T, increases endothelial cell oxidative stress and mitochondrial dysfunction

scientific article published on 09 December 2008

Loss of total and visceral adipose tissue mass predicts decreases in oxidative stress after weight-loss surgery

scientific article published on 11 December 2008

Low Dose Cadmium Stimulates Myofibroblast Differentiation and Lung Fibrosis by Activation of SMAD and Nuclear Thioredoxin-1

article published in 2016

Low-Dose Cadmium Causes Metabolic and Genetic Dysregulation Associated With Fatty Liver Disease in Mice

scientific article

Low-dose cadmium disrupts mitochondrial citric acid cycle and lipid metabolism in mouse lung

scientific article published on 06 December 2018

Low-dose cadmium potentiates lung inflammatory response to 2009 pandemic H1N1 influenza virus in mice

Low-dose cadmium potentiates lung inflammatory response to 2009 pandemic H1N1 influenza virus in mice

scientific article published on 15 April 2019

Low-dose oral cadmium increases airway reactivity and lung neuronal gene expression in mice

scientific article published on July 2016

Lung Cysteine/cystine Redox Potential Increase Is Associated with Worse Inflammation and Disrupted Metabolism during H1N1 Infection and Exposure to Dietary Levels of Cadmium

MTOR-initiated metabolic switch and degeneration in the retinal pigment epithelium

scientific article published on 28 July 2020

MaHPIC malaria systems biology data from Plasmodium cynomolgi sporozoite longitudinal infections in macaques

scientific article published in 2022

Macronutrient intake and body composition changes during anti-tuberculosis therapy in adults.

scientific article

Macronutrient, Energy, and Bile Acid Metabolism Pathways Altered Following a Physiological Meal Challenge, Relative to Fasting, among Guatemalan Adults

scientific article published on 29 June 2020

Maneb and Paraquat-Mediated Neurotoxicity: Involvement of Peroxiredoxin/Thioredoxin System ⬇️

scientific article published on March 14, 2011

Manganese Inhibition and Activation of Mitochondrial Oxidative Processes in Neuronal Cells

Manganese Stimulates Putrescine Accumulation and Influences Associated Polyamine, Methionine and Neurotransmitter Metabolism in Human SH-SY5Y Neuroblastoma Cells

scholarly article by Jolyn Fernandes et al published November 2017 in Free Radical Biology and Medicine

Maternal serum metabolome and traffic-related air pollution exposure in pregnancy

scientific article published on 20 June 2019

Measuring the poise of thiol/disulfide couples in vivo

scientific article published on 26 August 2009

MetabNet: An R Package for Metabolic Association Analysis of High-Resolution Metabolomics Data.

scientific article

Metabolic Characterization of the Common Marmoset (Callithrix jacchus)

scientific article published on 18 November 2015

Metabolic Consequences of Chronic Alcohol Abuse in Non-Smokers: A Pilot Study

scientific article published on 23 June 2015

Metabolic Pathways and Networks Associated With Tobacco Use in Military Personnel.

scientific article published on August 2016

Metabolic Phenotyping in Personalized and Public Healthcare. List of Contributors

section of a book

Metabolic Profiles of Obesity in American Indians: The Strong Heart Family Study

scientific article

Metabolic effects of albumin therapy in acute lung injury measured by proton nuclear magnetic resonance spectroscopy of plasma: a pilot study

scientific article published on October 2011

Metabolic effects of enteral versus parenteral alanyl-glutamine dipeptide administration in critically ill patients receiving enteral feeding: a pilot study

scientific article published on 07 February 2008

Metabolic pathways of lung inflammation revealed by high-resolution metabolomics (HRM) of H1N1 influenza virus infection in mice.

scientific article

Metabolic profiles of biological aging in American Indians: the Strong Heart Family Study

scientific article

Metabolome Wide Association Study of Serum Poly and Perfluoroalkyl Substances (PFASs) in Pregnancy and Early Postpartum

scientific article published on 20 May 2019

Metabolome Wide Association Study of serum DDT and DDE in Pregnancy and Early Postpartum

scientific article published on 15 May 2019

Metabolome-Wide Association Study of Deployment to Balad, Iraq or Bagram, Afghanistan

scientific article published on 01 December 2019

Metabolome-Wide Association Study of Primary Open Angle Glaucoma.

scientific article published in July 2015

Metabolome-wide association study in human platelets for identification of metabolic signatures related to precision medicine

scholarly article

Metabolome-wide association study of anti-epileptic drug treatment during pregnancy

scientific article published on 04 December 2018

Metabolome-wide association study of flavorant vanillin exposure in bronchial epithelial cells reveals disease-related perturbations in metabolism

scientific article published on 21 December 2020

Metabolome-wide association study of neovascular age-related macular degeneration

scientific article

Metabolome-wide association study of occupational exposure to benzene

journal article published in 2021

Metabolome-wide association study of peripheral parasitemia in Plasmodium vivax malaria

scientific article published on 6 September 2017

Metabolome-wide association study of phenylalanine in plasma of common marmosets

scientific article

Metabolomic Associations with Serum Bone Turnover Markers

scientific article published on 16 October 2020

Metabolomic Profiling After a Meal Shows Greater Changes and Lower Metabolic Flexibility in Cardiometabolic Diseases

scientific article published on 25 August 2020

Metabolomic Responses to Manganese Dose in SH-SY5Y Human Neuroblastoma Cells

scientific article published on 01 May 2019

Metabolomic assessment of exposure to near-highway ultrafine particles.

scientific article published on 5 December 2018

Metabolomic profiles of plasma, exhaled breath condensate, and saliva are correlated with potential for air toxics detection.

scientific article published on 15 August 2017

Metabolomics Analysis of Aspirin's Effects in Human Colon Tissue and Associations with Adenoma Risk

scientific article published on 12 July 2020

Metabolomics and Mycobacterial Disease: Don't Forget the Bioinformatics

scientific article published on January 2016

Metabolomics in the fight against malaria.

scientific article

Metabolomics of ADSOL (AS-1) red blood cell storage

scientific article

Metabolomics of Aerobic Exercise in Chronic Stroke Survivors: A Pilot Study

scientific article published on 25 October 2019

Metabolomics of bronchoalveolar lavage differentiate healthy HIV-1-infected subjects from controls.

scientific article

Metabolomics of childhood exposure to perfluoroalkyl substances: a cross-sectional study

scientific article published on 21 June 2019

Metabolomics of fescue toxicosis in grazing beef steers.

scientific article published on 18 April 2017

Metabolomics profile comparisons of irradiated and nonirradiated stored donor red blood cells.

scientific article

Microbial metabolite delta-valerobetaine is a diet-dependent obesogen

scientific article published on 20 December 2021

Mitochondria in precision medicine; linking bioenergetics and metabolomics in platelets

Mitochondrial metabolomics using high-resolution Fourier-transform mass spectrometry

scientific article

Mitochondrial network responses in oxidative physiology and disease

scientific article

Mitochondrial thioredoxin in regulation of oxidant-induced cell death

scientific article published on 14 November 2006

Mitochondrial thioredoxin-2 has a key role in determining tumor necrosis factor-alpha-induced reactive oxygen species generation, NF-kappaB activation, and apoptosis

scientific article published on 30 March 2006

Mitochondrial thioredoxin-2/peroxiredoxin-3 system functions in parallel with mitochondrial GSH system in protection against oxidative stress

scientific article

Multifractal analysis for nutritional assessment

scientific article

Multigenerational metabolic profiling in the Michigan PBB registry

scientific article published on 13 February 2019

Myeloperoxidase oxidation of methionine associates with early cystic fibrosis lung disease

scientific article published on 10 October 2018

N8-Acetylspermidine: A Polyamine Biomarker in Ischemic Cardiomyopathy With Reduced Ejection Fraction

scientific article published on 27 May 2020

Networks at the nexus of systems biology and the exposome

scholarly article

Nonequilibrium thermodynamics of thiol/disulfide redox systems: a perspective on redox systems biology

scientific article published on 28 November 2007

Novel Biomarker of Oxidative Stress Is Associated With Risk of Death in Patients With Coronary Artery Disease

scientific article

Novel metabolic markers for the risk of diabetes development in American Indians.

scientific article

Nuclear Thioredoxin-1 Overexpression Attenuates Alcohol-Mediated Nrf2 Signaling and Lung Fibrosis

scientific article published on 20 July 2016

Nuclear and cytoplasmic peroxiredoxin-1 differentially regulate NF-kappaB activities

scientific article

Nuclear and mitochondrial compartmentation of oxidative stress and redox signaling

scientific article

Nutritional metabolomics: progress in addressing complexity in diet and health.

scientific article

Omics Integration for Mitochondria Systems Biology

scientific article published on 03 February 2020

Overexpression of heat shock factor 1 inhibits butyrate-induced differentiation in colon cancer cells

scientific article published on January 2006

Oxidant-induced apoptosis in human retinal pigment epithelial cells: dependence on extracellular redox state

scientific article

Oxidation of extracellular cysteine/cystine redox state in bleomycin-induced lung fibrosis

scientific article published on 17 October 2008

Oxidation of glutathione and cysteine in human plasma associated with smoking

scientific article published in December 2003

Oxidation of plasma cysteine/cystine and GSH/GSSG redox potentials by acetaminophen and sulfur amino acid insufficiency in humans

scientific article

Oxidation of plasma cysteine/cystine redox state in endotoxin-induced lung injury

scientific article published on 29 July 2008

Oxidation of the glutathione/glutathione disulfide redox state is induced by cysteine deficiency in human colon carcinoma HT29 cells

scientific article published on 01 August 2002

Oxidative Stress Is Associated With Diastolic Dysfunction in Women With Ischemia With No Obstructive Coronary Artery Disease

scientific article published on 07 May 2020

Oxidative stress and inflammatory markers are determinants of carotid artery disease quantified by magnetic resonance imaging

Oxidative stress is associated with impaired arterial elasticity ⬇️

scientific article published on May 6, 2011

Oxidative stress is associated with increased pulmonary artery systolic pressure in humans.

scientific article

Oxidative stress modulates PPAR gamma in vascular endothelial cells

scientific article

Oxidative stress predicts cognitive decline with aging in healthy adults: an observational study.

scientific article published on 16 January 2018

Particulate metal exposures induce plasma metabolome changes in a commuter panel study

scientific article published in PLoS ONE

Perfluoroalkyl Substances and Metabolic Dysregulations over the Life-course: A Longitudinal Metabolome Investigation using Causal Inference Framework

scientific article published in 2023

Perfluoroalkyl substances and severity of nonalcoholic fatty liver in Children: An untargeted metabolomics approach

scientific article published on 16 November 2019

Perfluoroalkyl substances, metabolomic profiling, and alterations in glucose homeostasis among overweight and obese Hispanic children: A proof-of-concept analysis.

scientific article published on 4 March 2019

Periconception air pollution, metabolomic biomarkers, and fertility among women undergoing assisted reproduction

scientific article published on 08 June 2021

Peroxynitrite mediates calcium-dependent mitochondrial dysfunction and cell death via activation of calpains

scientific article published in July 2004

Perturbations of the arginine metabolome following exposures to traffic-related air pollution in a panel of commuters with and without asthma

scientific article published on 10 April 2019

Physical Fitness but Not Diet Quality Distinguishes Lean and Normal Weight Obese Adults

scientific article published on 30 September 2020

Phytochelatin database: a resource for phytochelatin complexes of nutritional and environmental metals

scientific article published on 01 January 2019

Pilot Metabolome-Wide Association Study of Benzo(a)pyrene in Serum From Military Personnel.

scientific article

Pilot randomized controlled trial of a Mediterranean diet or diet supplemented with fish oil, walnuts, and grape juice in overweight or obese US adults

scientific article published on 31 May 2018

Plasma High-Resolution Metabolomics Differentiates Adults with Normal Weight Obesity from Lean Individuals

scientific article published on 01 November 2019

Plasma Metabolomics of Common Marmosets (Callithrix jacchus) to Evaluate Diet and Feeding Husbandry

scientific article published on January 2016

Plasma acylcarnitine levels increase with healthy aging

scientific article published on 16 June 2020

Plasma high-resolution metabolomics identifies linoleic acid and linked metabolic pathways associated with bone mineral density

scientific article published on 04 June 2020

Plasma metabolomics in adults with cystic fibrosis during a pulmonary exacerbation: A pilot randomized study of high-dose vitamin D3 administration.

scientific article published on 11 February 2017

Plasma metabolomics in human pulmonary tuberculosis disease: a pilot study

scientific article

Plasma metabolomics reveals membrane lipids, aspartate/asparagine and nucleotide metabolism pathway differences associated with chloroquine resistance in Plasmodium vivax malaria

scientific article published on 16 August 2017

Postprandial cysteine/cystine redox potential in human plasma varies with meal content of sulfur amino acids

scientific article

Predicting network activity from high throughput metabolomics

scientific article

Prohibitin is a novel regulator of antioxidant response that attenuates colonic inflammation in mice

scientific article published on 25 March 2009

Prohibitin protects against oxidative stress in intestinal epithelial cells.

scientific article published on 29 November 2006

Proposing a Potential Mechanistic Link Between Early Life Air Pollution Exposure and Childhood Obesity Risk in Latinos

scholarly article published on 17 September 2023

Protection against oxidant-induced apoptosis by mitochondrial thioredoxin in SH-SY5Y neuroblastoma cells.

scientific article published on 20 May 2006

Protection of retinal pigment epithelial cells from oxidative damage by oltipraz, a cancer chemopreventive agent

scientific article published in November 2002

Protein Cysteines Map to Functional Networks According to Steady-state Level of Oxidation

scientific article

Proteomic analysis of microbial induced redox-dependent intestinal signaling

Putrescine as indicator of manganese neurotoxicity: Dose-response study in human SH-SY5Y cells

scientific article published on 20 April 2018

Quantification of redox conditions in the nucleus

scientific article

Reactive aldehyde modification of thioredoxin-1 activates early steps of inflammation and cell adhesion

scientific article

Reactive species and mitochondrial dysfunction: mechanistic significance of 4-hydroxynonenal

scientific article published on June 2010

Redox Equivalents and Mitochondrial Bioenergetics

scientific article published on 01 January 2018

Redox Systems Biology of Nutrition and Oxidative Stress

scientific article published on 01 April 2019

Redox biology: interface of the exposome with the proteome, epigenome and genome

scientific article published on 10 January 2014

Redox control systems in the nucleus: mechanisms and functions

scientific article

Redox dynamics of manganese as a mitochondrial life-death switch.

scientific article published on January 2017

Redox equivalents and mitochondrial bioenergetics

scientific article

Reductive Stress Causes Pathological Cardiac Remodeling and Diastolic Dysfunction

scientific article published on 16 February 2020

Reference Standardization for Mass Spectrometry and High-resolution Metabolomics Applications to Exposome Research

scientific article

Reference Standardization for Quantification and Harmonization of Large-Scale Metabolomics

scientific article published on 03 June 2020

Regulation of prostate cancer cell invasion by modulation of extra- and intracellular redox balance

scientific article published on 9 November 2011

Relation of Changes in Body Fat Distribution to Oxidative Stress

scientific article published on 20 September 2017

Reply: To PMID 24369802

scientific article published on 29 March 2014

Reprint of "Metabolome Wide Association Study of Serum Poly and Perfluoroalkyl Substances (PFASs) in Pregnancy and Early Postpartum"

scientific article published on 08 January 2020

Response of Beef Cattle Fecal Microbiota to Grazing on Toxic Tall Fescue

scientific article published on 18 July 2019

Response to Letter Regarding Article "Novel Biomarker of Oxidative Stress Is Associated With Risk of Death in Patients With Coronary Artery Disease".

scientific article published on May 2016

Role of caspase activation in butyrate-induced terminal differentiation of HT29 colon carcinoma cells

scientific article published on April 2004

Role of heat shock protein and cytokine expression as markers of clinical outcomes with glutamine-supplemented parenteral nutrition in surgical ICU patients

scientific article published on 13 March 2019

Sampling interstitial fluid from human skin using a microneedle patch

scientific article published on 01 November 2020

Selective protection of nuclear thioredoxin-1 and glutathione redox systems against oxidation during glucose and glutamine deficiency in human colonic epithelial cells

scientific article published on 10 November 2006

Selective targeting of the cysteine proteome by thioredoxin and glutathione redox systems.

scientific article published on 14 August 2013

Selenium Supplementation Alters Hepatic Energy and Fatty Acid Metabolism in Mice

scientific article published on 01 May 2018

Selenium at the redox interface of the genome, metabolome and exposome

article published in 2018

Selenium supplementation prevents metabolic and transcriptomic responses to cadmium in mouse lung

scientific article published on 12 April 2018

Self-similarity in NMR Spectra: An Application in Assessing the Level of Cysteine ⬇️

scientific article published on January 1, 2010

Serum metabolomics of slow vs. rapid motor progression Parkinson's disease: a pilot study

scientific article

Short-term oral atrazine exposure alters the plasma metabolome of male C57BL/6 mice and disrupts α-linolenate, tryptophan, tyrosine and other major metabolic pathways.

scientific article published on 4 November 2014

Stimulation of colonic mucosal growth associated with oxidized redox status in rats

scientific article published on 09 November 2006

Substitution of standard soybean oil with olive oil-based lipid emulsion in parenteral nutrition: comparison of vascular, metabolic, and inflammatory effects

scientific article

Sulfur amino acid-free diet results in increased glutamate in human midbrain: a pilot magnetic resonance spectroscopic study

scientific article published on 14 September 2011

Symptom Science Research in the Era of Big Data: Leveraging Interdisciplinary Resources and Partners to Make It Happen

scientific article published on 19 November 2018

Targeting cell signalling pathways to fight the flu: towards a paradigm change in anti-influenza therapy

scientific article published on 06 May 2009

Targeting soluble tumor necrosis factor as a potential intervention to lower risk for late-onset Alzheimer's disease associated with obesity, metabolic syndrome, and type 2 diabetes

scientific article published on 31 December 2019

The Carnitine Shuttle Pathway is Altered in Patients With Neovascular Age-Related Macular Degeneration

scientific article published on 01 October 2018

The Coenzyme Q10 analog decylubiquinone inhibits the redox-activated mitochondrial permeability transition: role of mitcohondrial [correction mitochondrial] complex III.

scientific article published on 29 August 2003

The Effects of Graded Levels of Calorie Restriction: XIII. Global Metabolomics Screen Reveals Graded Changes in Circulating Amino Acids, Vitamins, and Bile Acids in the Plasma of C57BL/6 Mice.

scientific article published on 30 April 2018

The Exposome: Molecules to Populations

scientific article published on 10 August 2018

The Redox Theory of Development

scientific article published on 01 April 2020

The cysteine proteome

scientific article

The differential effect of statins on oxidative stress and endothelial function: atorvastatin versus pravastatin

scientific article published on 13 September 2011

The effects of age and dietary restriction on the tissue-specific metabolome of Drosophila.

scientific article

The impact of heat exposures on biomarkers of AKI and plasma metabolome among agricultural and non-agricultural workers

journal article published in 2023

The metabolome: A key measure for exposome research in epidemiology

scientific article published on 26 April 2019

The nature of nurture: refining the definition of the exposome

scientific article

The redox regulation of intermediary metabolism by a superoxide-aconitase rheostat

scientific article

The relationship between plasma levels of oxidized and reduced thiols and early atherosclerosis in healthy adults

scientific article published on 9 February 2006

The role of plasma aminothiols in the prediction of coronary microvascular dysfunction and plaque vulnerability

scientific article published on 27 May 2011

Thiol redox disturbances in children with severe asthma are associated with posttranslational modification of the transcription factor nuclear factor (erythroid-derived 2)-like 2.

scientific article

Thiol-reactivity of the fungicide maneb

scientific article published on 18 April 2014

Thiol/disulfide redox status is oxidized in plasma and small intestinal and colonic mucosa of rats with inadequate sulfur amino acid intake

scientific article published on 01 May 2006

Time-course metabolomic analysis of manganese toxicity reveals biomarkers of oxidative stress and amino acid metabolism as early cellular targets

scholarly article

Total equivalent of reactive chemicals in 142 human food items is highly variable within and between major food groups

scientific article published on 01 May 2004

Toxic tall fescue grazing increases susceptibility of the Angus steer fecal microbiota and plasma/urine metabolome to environmental effects

scientific article published on 12 February 2020

Transcriptome Analysis Reveals Distinct Responses to Physiologic versus Toxic Manganese Exposure in Human Neuroblastoma Cells

scientific article published on 24 July 2019

Transcriptome-metabolome wide association study (TMWAS) of maneb and paraquat neurotoxicity reveals network level interactions in toxicologic mechanism

scientific article published on 24 July 2014

Trefoil peptide expression and goblet cell number in rat intestine: effects of KGF and fasting-refeeding

scientific journal article

Trophic and cytoprotective nutrition for intestinal adaptation, mucosal repair, and barrier function

scientific article

Tryptophan catabolism reflects disease activity in human tuberculosis

scientific article published on 05 May 2020

Tumor necrosis factor-alpha antagonism with etanercept improves endothelial progenitor cell counts in patients with psoriasis: etanercept, vascular function and endothelial progenitor cells in psoriasis

scientific article published on 27 December 2014

Understanding mixed environmental exposures using metabolomics via a hierarchical community network model in a cohort of California women in 1960's

scientific article published on 09 July 2019

Unsupervised dimensionality reduction for exposome research

scientific article published on 19 May 2020

Untargeted Metabolomics Screen of Mid-pregnancy Maternal Serum and Autism in Offspring

scientific article published on 04 June 2020

Untargeted high-resolution plasma metabolomic profiling predicts outcomes in patients with coronary artery disease

scientific article published on 18 August 2020

Untargeted metabolomics reveal dysregulations in sugar, methionine, and tyrosine pathways in the prodromal state of AD

scientific article published on 11 August 2020

Untargeted metabolomics reveals multiple metabolites influencing smoking-related DNA methylation.

scientific article

Use of Biomarkers to Assess Environmental Exposures and Health Outcomes in Deployed Troops

scientific article published on 01 December 2019

Use of high-resolution metabolomics for the identification of metabolic signals associated with traffic-related air pollution

scientific article published on 07 August 2018

Vaccine activation of the nutrient sensor GCN2 in dendritic cells enhances antigen presentation

scientific article

Vascular oxidative stress and nitric oxide depletion in HIV-1 transgenic rats are reversed by glutathione restoration

scientific article published on 02 May 2008

Vitamin D status is independently associated with plasma glutathione and cysteine thiol/disulphide redox status in adults

scientific article

Western diet induces colonic nitrergic myenteric neuropathy and dysmotility in mice via saturated fatty acid- and lipopolysaccharide-induced TLR4 signalling.

scientific article published on 20 December 2016

apLCMS--adaptive processing of high-resolution LC/MS data

scientific article

xMSanalyzer: automated pipeline for improved feature detection and downstream analysis of large-scale, non-targeted metabolomics data

scientific article

xMSannotator: An R Package for Network-Based Annotation of High-Resolution Metabolomics Data.

scientific article

xMWAS: a data-driven integration and differential network analysis tool.

scientific article published on 23 October 2017

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