List of works by Casey W. Dunn

A phylogenetic backbone for Bivalvia: an RNA-seq approach

scientific article

Adaptive evolution of HoxA-11 and HoxA-13 at the origin of the uterus in mammals.

scientific article published in November 2004

Agalma: an automated phylogenomics workflow

scientific article

An Integrated Perspective on Phylogenetic Workflows

scientific article

Animal Evolution: Are Phyla Real?

scientific article published in May 2016

Assessing the root of bilaterian animals with scalable phylogenomic methods

scientific article

Automation and Evaluation of the SOWH Test with SOWHAT.

scientific article

Bayesian genome assembly and assessment by markov chain monte carlo sampling.

scientific article

Bioluminescent and red-fluorescent lures in a deep-sea siphonophore

scientific article

Broad taxon and gene sampling indicate that chaetognaths are protostomes.

scientific article published in August 2006

Characterization of differential transcript abundance through time during Nematostella vectensis development.

scientific article

Comparative muscle development of scyphozoan jellyfish with simple and complex life cycles

scientific article

Complex colony-level organization of the deep-sea siphonophore Bargmannia elongata (Cnidaria, Hydrozoa) is directionally asymmetric and arises by the subdivision of pro-buds

Conservative evolution in duplicated genes of the primate Class I ADH cluster

scientific article published on 23 November 2006

Ctenophore trees

scientific article published on 01 November 2017

Differential gene expression in the siphonophore Nanomia bijuga (Cnidaria) assessed with multiple next-generation sequencing workflows

scientific article

Evolution: out of the ocean

scientific article published in March 2013

Fluorescent proteins function as a prey attractant: experimental evidence from the hydromedusa Olindias formosus and other marine organisms

scientific article

Genomics: Acorn worms in a nutshell

scientific article published on 18 November 2015

Indoles induce metamorphosis in a broad diversity of jellyfish, but not in a crown jelly (Coronatae).

scientific article published on 27 December 2017

Insights into the Biodiversity, Behavior, and Bioluminescence of Deep-Sea Organisms Using Molecular and Maritime Technology

scientific article published in 2017

Integrating siphonophores into marine food‐web ecology

scientific article published in 2022

Molecular evidence for deep evolutionary roots of bilaterality in animal development

scholarly article

Molecular phylogenetics of the siphonophora (Cnidaria), with implications for the evolution of functional specialization

scientific article

Pairwise comparisons across species are problematic when analyzing functional genomic data

scientific article published on 4 January 2018

Par system components are asymmetrically localized in ectodermal epithelia, but not during early development in the sea anemone Nematostella vectensis

scientific article published on 9 May 2015

Phylogenetic analysis of gene expression

scientific article published on 7 June 2013

Phylogenomic Analyses Support Traditional Relationships within Cnidaria

scientific article

Phylogenomic analyses of Echinodermata support the sister groups of Asterozoa and Echinozoa

scientific article

Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda

scientific article

Phylogenomic analyses support traditional relationships within Cnidaria

article

Phyutility: a phyloinformatics tool for trees, alignments and molecular data

scientific article

Reconsidering the phylogenetic utility of miRNA in animals

scientific article

Resolving the evolutionary relationships of molluscs with phylogenomic tools

scientific article

Siphonophores.

scientific article published in March 2009

Spiralian phylogeny informs the evolution of microscopic lineages

scientific article

Stem cells in Nanomia bijuga (Siphonophora), a colonial animal with localized growth zones

scientific article published on 27 May 2015

The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes

scientific article

The Histology ofNanomia bijuga(Hydrozoa: Siphonophora)

The evolution of animal genomes

scientific article published on 9 September 2015

The evolution of colony-level development in the Siphonophora (Cnidaria:Hydrozoa).

scientific article

The evolution of siphonophore tentilla for specialized prey capture in the open ocean

scientific article published in 2021

The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution

scientific article

The hidden biology of sponges and ctenophores

scientific article published on 31 March 2015

The histology of Nanomia bijuga (Hydrozoa: Siphonophora)

scientific article

Toward a statistically explicit understanding of de novo sequence assembly

scientific article

We are not so special.

scientific article

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