List of works by Sandya Liyanarachchi

A Truncating Germline Mutation of TINF2 in Individuals with Thyroid Cancer or Melanoma Results in Longer Telomeres

scientific article published on 01 February 2020

A genome-wide association study yields five novel thyroid cancer risk loci

scientific article published on 14 February 2017

A germline mutation in SRRM2, a splicing factor gene, is implicated in papillary thyroid carcinoma predisposition

scientific article published on 2 July 2015

A high performance test of differential gene expression for oligonucleotide arrays ⬇️

scientific article published on September 10, 2003

A susceptibility locus for papillary thyroid carcinoma on chromosome 8q24.

scientific article published on January 2009

Aberrant DNA methylation of OLIG1, a novel prognostic factor in non-small cell lung cancer

scientific article published on 27 March 2007

Acute myeloid leukemia with complex karyotypes and abnormal chromosome 21: Amplification discloses overexpression of APP, ETS2, and ERG genes

scholarly article

Allele-specific expression of TGFBR1 in colon cancer patients

scientific article

Allelic variation in gene expression in thyroid tissue

scientific article

Amnionless, essential for mouse gastrulation, is mutated in recessive hereditary megaloblastic anemia

scientific article

An American founder mutation in MLH1.

scientific article published on 30 August 2011

An NF-κB--EphrinA5-Dependent Communication between NG2(+) Interstitial Cells and Myoblasts Promotes Muscle Growth in Neonates.

scientific article published on 13 January 2016

An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules

scientific article

Ancient founder mutation is responsible for Imerslund-Gräsbeck Syndrome among diverse ethnicities

scientific article published on 13 November 2011

Assessing thyroid cancer risk using polygenic risk scores

scientific article published on 04 March 2020

BAALC, a novel marker of human hematopoietic progenitor cells*1 ⬇️

scientific article published on November 1, 2003

Breast cancer-associated fibroblasts confer AKT1-mediated epigenetic silencing of Cystatin M in epithelial cells

scientific article

Changes in gene expression associated with loss of function of the NSDHL sterol dehydrogenase in mouse embryonic fibroblasts

scientific article (publication date: June 2005)

Characterizing the function of EPB41L4A in the predisposition to papillary thyroid carcinoma

scientific article published on 17 November 2020

Clinical characteristics of patients with colorectal cancer with double somatic mismatch repair mutations compared with Lynch syndrome

scientific article published on 15 March 2019

Combinatorial analysis of transcription factor partners reveals recruitment of c-MYC to estrogen receptor-alpha responsive promoters.

scientific article published on February 2006

Correction: Ultra-Rare Mutation in Long-Range Enhancer Predisposes to Thyroid Carcinoma with High Penetrance.

scientific article published on 10 September 2013

CpG island methylation in a mouse model of lymphoma is driven by the genetic configuration of tumor cells

scientific article

Cumulative risk impact of five genetic variants associated with papillary thyroid carcinoma

scientific article published on 29 August 2013

DNA hypermethylation and epigenetic silencing of the tumor suppressor gene, SLC5A8, in acute myeloid leukemia with the MLL partial tandem duplication

scientific article published on 19 June 2008

Dissection of the Major Hematopoietic Quantitative Trait Locus in Chromosome 6q23.3 Identifies miR-3662 as a Player in Hematopoiesis and Acute Myeloid Leukemia

scientific article published on 27 June 2016

Epigenetic changes during disease progression in a murine model of human chronic lymphocytic leukemia

scientific article

Epigenetic influences of low-dose bisphenol A in primary human breast epithelial cells

scientific article

Epigenetic profiling in chronic lymphocytic leukemia reveals novel methylation targets

scientific article published in April 2004

Epigenetic silencing mediated through activated PI3K/AKT signaling in breast cancer

scientific article

Fine mapping of 14q13 reveals novel variants associated with different histological subtypes of papillary thyroid carcinoma

article

GWAS of thyroid stimulating hormone highlights pleiotropic effects and inverse association with thyroid cancer

scientific article published on 07 August 2020

Gene expression and functional evidence of epithelial-to-mesenchymal transition in papillary thyroid carcinoma invasion

scholarly article

Gene expression profiling identifies MMP-12 and ADAMDEC1 as potential pathogenic mediators of pulmonary sarcoidosis

scientific article

Gene expression profiling of isogenic cells with different TP53 gene dosage reveals numerous genes that are affected by TP53 dosage and identifies CSPG2 as a direct target of p53

scientific article

Gene expression profiling of the human natural killer cell response to Fc receptor activation: unique enhancement in the presence of interleukin-12.

scientific article published on 15 October 2015

Genetic Characterization and Prognostic Relevance of Acquired Uniparental Disomies in Cytogenetically Normal Acute Myeloid Leukemia

scientific article published on 02 August 2019

Genetic predisposition to papillary thyroid carcinoma: involvement of FOXE1, TSHR, and a novel lincRNA gene, PTCSC2

scientific article

Genome-Wide Expression Screening Discloses Long Noncoding RNAs Involved in Thyroid Carcinogenesis

scientific article published on 26 July 2016

Genome-wide analysis of core promoter elements from conserved human and mouse orthologous pairs

scientific article

Genome-wide association study identifies an acute myeloid leukemia susceptibility locus near BICRA

scientific article published on 05 October 2018

Germline allele-specific expression of TGFBR1 confers an increased risk of colorectal cancer

scientific article published on 14 August 2008

Glioma cell migration on three-dimensional nanofiber scaffolds is regulated by substrate topography and abolished by inhibition of STAT3 signaling.

scientific article

HABP2 G534E Variant in Papillary Thyroid Carcinoma

scientific article published on 8 January 2016

Heritable polymorphism predisposes to high BAALC expression in acute myeloid leukemia

scientific article published on 9 April 2012

Human pheochromocytomas show reduced p27Kip1 expression that is not associated with somatic gene mutations and rarely with deletions

scientific article published on 07 June 2007

Hypermethylation of 18S and 28S ribosomal DNAs predicts progression-free survival in patients with ovarian cancer.

scientific article published on October 2005

IKKα and alternative NF-κB regulate PGC-1β to promote oxidative muscle metabolism

scientific article published on February 2012

Identification of Rare Variants Predisposing to Thyroid Cancer

scientific article published on 13 May 2019

Identification of candidate epigenetic biomarkers for ovarian cancer detection

scientific article

Identification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease

scientific article

Identifying estrogen receptor alpha target genes using integrated computational genomics and chromatin immunoprecipitation microarray

scientific article

Inherited cobalamin malabsorption. Mutations in three genes reveal functional and ethnic patterns

scientific article

MicroRNA signature in thyroid fine needle aspiration cytology applied to "atypia of undetermined significance" cases

scientific article published on 2 December 2011

MicroRNA-3151 inactivates TP53 in BRAF-mutated human malignancies

scientific article

Multiple functional variants in long-range enhancer elements contribute to the risk of SNP rs965513 in thyroid cancer

scientific article published on 27 April 2015

Mutations in U4atac snRNA, a component of the minor spliceosome, in the developmental disorder MOPD I

scientific article

NF-κB inhibition rescues cardiac function by remodeling calcium genes in a Duchenne muscular dystrophy model

scientific article published in Nature Communications

NRAS isoforms differentially affect downstream pathways, cell growth, and cell transformation

scientific article published on 28 February 2014

Origins and prevalence of the American Founder Mutation of MSH2.

scientific article

PTCSC3 Is Involved in Papillary Thyroid Carcinoma Development by Modulating S100A4 Gene Expression

scientific article

Papillary Thyroid Carcinoma: Association Between Germline DNA Variant Markers and Clinical Parameters

scientific article published on 24 June 2016

Papillary and follicular thyroid carcinomas show distinctly different microarray expression profiles and can be distinguished by a minimum of five genes

scientific article

Penetrance of a rare familial mutation predisposing to papillary thyroid cancer

scientific article

Pheochromocytoma in rats with multiple endocrine neoplasia (MENX) shares gene expression patterns with human pheochromocytoma

scientific article

Polymorphic mature microRNAs from passenger strand of pre-miR-146a contribute to thyroid cancer

scholarly article

Prevalence and Spectrum of Germline Cancer Susceptibility Gene Mutations Among Patients With Early-Onset Colorectal Cancer

scientific article

Prognostic DNA methylation biomarkers in ovarian cancer.

scientific article

RelA/p65 functions to maintain cellular senescence by regulating genomic stability and DNA repair

scientific article published on 25 September 2009

Risk Haplotypes Uniquely Associated with Radioiodine-Refractory Thyroid Cancer Patients of High African Ancestry

scientific article published on 13 February 2019

Role of cancer-associated stromal fibroblasts in metastatic colon cancer to the liver and their expression profiles

scientific article published on September 2004

SRGAP1 is a candidate gene for papillary thyroid carcinoma susceptibility

scientific article published on 28 March 2013

Suppression of peroxiredoxin 4 in glioblastoma cells increases apoptosis and reduces tumor growth

scientific article

TWIST2 demonstrates differential methylation in immunoglobulin variable heavy chain mutated and unmutated chronic lymphocytic leukemia

scientific article (publication date: 10 June 2005)

Telomere length and telomerase reverse transcriptase gene copy number in patients with papillary thyroid carcinoma

scientific article

The polymorphism rs944289 predisposes to papillary thyroid carcinoma through a large intergenic noncoding RNA gene of tumor suppressor type

scientific article

The role of NRG1 in the predisposition to papillary thyroid carcinoma

scientific article

The role of SMAD3 in the genetic predisposition to papillary thyroid carcinoma

scientific article published on 4 January 2018

The role of microRNA genes in papillary thyroid carcinoma

scientific article

Thyroid Hormone Receptor β (THRB) Is a Major Target Gene for Micro-RNAs Deregulated in Papillary Thyroid Carcinoma (PTC).

scientific article published in February 2011

Thyroid hormone receptor beta (THRB) is a major target gene for microRNAs deregulated in papillary thyroid carcinoma (PTC)

scientific article

Ultra-rare mutation in long-range enhancer predisposes to thyroid carcinoma with high penetrance

scientific article

Variants in LRRC34 reveal distinct mechanisms for predisposition to papillary thyroid carcinoma

scientific article published on 12 February 2020

Variants in microRNA genes in familial papillary thyroid carcinoma

scientific article published on 23 December 2016

Variants in the netrin-1 receptor UNC5C prevent apoptosis and increase risk of familial colorectal cancer

scientific article published on 3 September 2011

Xenoestrogen-induced epigenetic repression of microRNA-9-3 in breast epithelial cells

scientific article

beta-2-adrenergic receptor gene polymorphism confers susceptibility to Graves disease.

scientific article published on January 2007

miR-3151 Interplays With its Host Gene BAALC and Independently Impacts on Outcome of Older Patients With Cytogenetically Normal Acute Myeloid Leukemia by Direct Deregulation of TP53

article

miR-3151 interplays with its host gene BAALC and independently affects outcome of patients with cytogenetically normal acute myeloid leukemia

scientific article

p53 Codon 72 and MDM2 SNP309 Polymorphisms and Age of Colorectal Cancer Onset in Lynch Syndrome

scientific article published on 01 October 2005

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