List of works by Jianjiong Gao

A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer

scientific article published on 03 April 2020

A phase II study of frontline paclitaxel/carboplatin/bevacizumab, paclitaxel/carboplatin/temsirolimus, or ixabepilone/carboplatin/bevacizumab in advanced/recurrent endometrial cancer

scientific article published on 24 May 2018

An integrative somatic mutation analysis to identify pathways linked with survival outcomes across 19 cancer types.

scientific article published on 03 December 2015

BioJava-ModFinder: identification of protein modifications in 3D structures from the Protein Data Bank.

scientific article

BioJava: an open-source framework for bioinformatics in 2012

scientific article

BridgeDb app: unifying identifier mapping services for Cytoscape

scientific article published on July 2014

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

article

Comprehensive Characterization of Cancer Driver Genes and Mutations.

scientific article published in April 2018

Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma

article

Deletions linked to TP53 loss drive cancer through p53-independent mechanisms.

scientific article published on 16 March 2016

Effector prediction in host-pathogen interaction based on a Markov model of a ubiquitous EPIYA motif

scientific article

Genetic Predictors of Response to Systemic Therapy in Esophagogastric Cancer.

scientific article published on 9 November 2017

Genome Nexus: A Comprehensive Resource for the Annotation and Interpretation of Genomic Variants in Cancer

scientific article published in 2022

Integrated Genomics for Pinpointing Survival Loci within Arm-Level Somatic Copy Number Alterations.

scientific article published on May 2016

Integration and Analysis of CPTAC Proteomics Data in the Context of Cancer Genomics in the cBioPortal

scientific article published on 15 July 2019

Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal

scientific article

Integrative clinical genomics of advanced prostate cancer

scientific article

Multiomic Integration of Public Oncology Databases in Bioconductor

scientific article published on 01 October 2020

Musite, a tool for global prediction of general and kinase-specific phosphorylation sites.

scientific article

Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.

scientific article published on 8 May 2017

Overcome tumor heterogeneity-imposed therapeutic barriers through convergent genomic biomarker discovery: A braided cancer river model of kidney cancer.

scientific article published on 8 September 2016

Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean

scientific article published on 22 March 2012

Publisher Correction: The long tail of oncogenic drivers in prostate cancer

scientific article published on 01 July 2019

The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services

scientific article (publication date: 4 January 2010)

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

article

The Musite open-source framework for phosphorylation-site prediction

scientific article

The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data

scientific article

The expanding landscape of 'oncohistone' mutations in human cancers

scientific article published on 20 March 2019

The long tail of oncogenic drivers in prostate cancer.

scientific article published on 2 April 2018

Translational Bioinformatics and Clinical Research (Biomedical) Informatics.

scientific article published on 31 March 2015

Translational Bioinformatics and Clinical Research (Biomedical) Informatics.

scientific article published on March 2016

rcellminer: exploring molecular profiles and drug response of the NCI-60 cell lines in R

scientific article published on 03 December 2015

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