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List of works by Zhike Zi

A quantitative study of the Hog1 MAPK response to fluctuating osmotic stress in Saccharomyces cerevisiae

scientific article

A tutorial on mathematical modeling of biological signaling pathways.

scientific article published on January 2012

Cell-type-specific role of CHK2 in mediating DNA damage-induced G2 cell cycle arrest

scientific article published on 13 March 2020

Cellular signaling is potentially regulated by cell density in receptor trafficking networks

scientific article published on 31 August 2007

Characterization of early autophagy signaling by quantitative phosphoproteomics

scientific article published on 21 November 2013

Constraint-based modeling and kinetic analysis of the Smad dependent TGF-beta signaling pathway

scientific article

Dynamics of TGF‐β/Smad signaling ⬇️

scientific article published on April 9, 2012

In silico identification of the key components and steps in IFN-gamma induced JAK-STAT signaling pathway

scientific article published in February 2005

Inferring causal molecular networks: empirical assessment through a community-based effort

scientific article

Inferring cellular regulatory networks with Bayesian model averaging for linear regression (BMALR).

scientific article published in August 2014

Measuring TGF-β Ligand Dynamics in Culture Medium

scientific article published on January 2016

Molecular Engineering of the TGF-β Signaling Pathway

scientific article published on 21 May 2019

Quantitative analysis of transient and sustained transforming growth factor-β signaling dynamics.

scientific article

SBML-PET-MPI: a parallel parameter estimation tool for Systems Biology Markup Language based models ⬇️

scientific article published on February 8, 2011

SBML-PET: a Systems Biology Markup Language-based parameter estimation tool

scientific article published on 22 August 2006

SBML-SAT: a systems biology markup language (SBML) based sensitivity analysis tool

scientific article

Sensitivity analysis approaches applied to systems biology models.

scientific article

Spatiotemporal Control of TGF-β Signaling with Light

scientific article

Steady state analysis of signal response in receptor trafficking networks

scientific article published in January 2007

Time-dependent quantitative multicomponent control of the G₁-S network by the stress-activated protein kinase Hog1 upon osmostress

scientific article published in September 2011

Tissue-Specific Chk1 Activation Determines Apoptosis by Regulating the Balance of p53 and p21

scientific article published on 05 January 2019

eDetect: A Fast Error Detection and Correction Tool for Live Cell Imaging Data Analysis

scientific article published on 08 February 2019

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