Search filters

List of works by Richard Finkers

A Stringent and Broad Screen of Solanum spp. tolerance Against Erwinia Bacteria Using a Petiole Test

Assessing the genetic variation of Ty-1 and Ty-3 alleles conferring resistance to tomato yellow leaf curl virus in a broad tomato germplasm.

scientific article published on 26 May 2015

Biosynthesis of antinutritional alkaloids in solanaceous crops is mediated by clustered genes

scientific article published on 20 June 2013

BrAPI-an application programming interface for plant breeding applications

scientific article published on 01 October 2019

Breeding Has Increased the Diversity of Cultivated Tomato in The Netherlands

scientific article published on 20 December 2019

Combined biotic and abiotic stress resistance in tomato

Combining an in vitro reporter gene assay with metabolomics to identify tomato phytochemicals responsible for inducing electrophile-responsive element (EpRE)-mediated gene transcription

article

Comparison of Regularized Regression Methods for ~Omics Data

Detection of an inversion in the Ty-2 region between S. lycopersicum and S. habrochaites by a combination of de novo genome assembly and BAC cloning

scientific article

ELIXIR Plant sciences 2020-2023 Roadmap

Efficient algorithms for polyploid haplotype phasing.

scientific article published on 9 May 2018

Enabling reusability of plant phenomic datasets with MIAPPE 1.1.

scientific article published on 14 March 2020

Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study.

scientific article

Exploration of a Resequenced Tomato Core Collection for Phenotypic and Genotypic Variation in Plant Growth and Fruit Quality Traits

scientific article published on 29 October 2020

Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole-genome sequencing

scientific article published on 3 September 2014

Exploring natural genetic variation in tomato sucrose synthases on the basis of increased kinetic properties

scientific article published in PLoS ONE

Extracting knowledge networks from plant scientific literature: potato tuber flesh color as an exemplary trait

scientific article published on 24 April 2021

Family-Based Haplotype Estimation and Allele Dosage Correction for Polyploids Using Short Sequence Reads

scientific article published on 16 April 2019

Genebanks and genomics: how to interconnect data from both communities?

Genetic analysis of metabolites in apple fruits indicates an mQTL hotspot for phenolic compounds on linkage group 16

scientific article

Global range expansion history of pepper (Capsicum spp.) revealed by over 10,000 genebank accessions

scientific article

Haplotype assembly of autotetraploid potato using integer linear programing

scientific article published on 01 September 2019

High-Density Linkage Map Constructed from a Skim Sequenced Diploid Potato Population Reveals Transmission Distortion and QTLs for Tuber Yield and Pollen Shed

scientific article published in 2023

Identification and mapping of quantitative resistance to late blight (Phytophthora infestans) in Solanum habrochaites LA1777

Improved utilization of crop diversity for rationalized breeding using data interoperability

Inheritance of taste components in tomato

article published in 2000

Linked Data Platform for Solanaceae Species

scientific article published in 2020

MQ2: visualizing multi-trait mapped QTL results

scholarly article by Pierre-Yves Chibon et al published 14 July 2013 in Molecular Breeding

Managing Variant Calling Files the Big Data Way

Mapping and characterization of novel parthenocarpy QTLs in tomato

scientific article published on 30 January 2008

Mapping in the era of sequencing: high density genotyping and its application for mapping TYLCV resistance in Solanum pimpinellifolium

scientific article published on 20 December 2014

Marker2sequence, mine your QTL regions for candidate genes

scientific article published on 23 May 2012

PEDIGREE GENOTYPING: A NEW PEDIGREE-BASED APPROACH OF QTL IDENTIFICATION AND ALLELE MINING

article

PEDIGREE GENOTYPING: A NEW PEDIGREE-BASED APPROACH OF QTL IDENTIFICATION AND ALLELE MINING BY EXPLOITING BREEDING MATERIAL

article published in 2006

Possibilities and Challenges of the Potato Genome Sequence

article by R. G. F. Visser et al published December 2014 in Potato Research

QTL mapping of anthracnose ( Colletotrichum spp.) resistance in a cross between Capsicum annuum and C. chinense

scientific article published on 12 August 2004

QTLTableMiner++: semantic mining of QTL tables in scientific articles.

scientific article published on 25 May 2018

Quantitative resistance to Botrytis cinerea from Solanum neorickii

Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR

scientific article published in 2022

Seedling salt tolerance in tomato

SolRgene: an online database to explore disease resistance genes in tuber-bearing Solanum species

scientific article

The FAIR Guiding Principles for scientific data management and stewardship

scientific article (publication date: 15 March 2016)

The construction of a Solanum habrochaites LYC4 introgression line population and the identification of QTLs for resistance to Botrytis cinerea.

scientific article published on 2 February 2007

Three QTLs for Botrytis cinerea resistance in tomato

scientific article published on 30 November 2006

Tomato breeding in the genomics era: insights from a SNP array

scientific article

TriPoly: a haplotype estimation approach for polyploids using sequencing data of related individuals

TriPoly: haplotype estimation for polyploids using sequencing data of related individuals

scholarly article by Ehsan Motazedi published in June 2018

UAV based soil salinity assessment of cropland

scholarly article by Konstantin Ivushkin et al published September 2018 in Geoderma

Using phenomics and genomics to unlock landrace and wild relative diversity for crop improvement

Paulina is supported by:

About Paulina

Help