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List of works by Miguel Reboiro-Jato

A comprehensive analysis about the influence of low-level preprocessing techniques on mass spectrometry data for sample classification.

scientific article

A mesofluidic platform integrating on-chip probe ultrasonication for multiple sample pretreatment involving denaturation, reduction, and digestion in protein identification assays by mass spectrometry

scientific article published on 20 January 2014

A methodological approach based on gold-nanoparticles followed by matrix assisted laser desorption ionization time of flight mass spectrometry for the analysis of urine profiling of knee osteoarthritis

scientific article published on 29 June 2015

A new approach to bacterial colony morphotyping by matrix-assisted laser desorption ionization time of flight-based mass spectrometry

scientific article

A novel (18)O inverse labeling-based workflow for accurate bottom-up mass spectrometry quantification of proteins separated by gel electrophoresis

scientific article

A novel ensemble approach for multicategory classification of DNA microarray data using biological relevant gene sets.

scientific article

AIBench: a rapid application development framework for translational research in biomedicine

scientific article published on 4 January 2010

ALTER: program-oriented conversion of DNA and protein alignments

scientific article published on 3 May 2010

An assessment of the ultrasonic probe‐based enhancement of protein cleavage with immobilized trypsin

scientific article published on September 7, 2011

Auto-phylo v2 and auto-phylo-pipeliner: building advanced, flexible, and reusable pipelines for phylogenetic inferences, estimation of variability levels and identification of positively selected amino acid sites

scientific article published in 2024

BDBM 1.0: A Desktop Application for Efficient Retrieval and Processing of High-Quality Sequence Data and Application to the Identification of the Putative Coffea S-Locus

scientific article published on 02 February 2019

BioAnnote: a software platform for annotating biomedical documents with application in medical learning environments.

scientific article published on 4 April 2013

Bioinformatics Protocols for Quickly Obtaining Large-Scale Data Sets for Phylogenetic Inferences

scientific article published on 03 December 2018

Classifying patients in peritoneal dialysis by mass spectrometry-based profiling

scientific article

Decision peptide-driven: a free software tool for accurate protein quantification using gel electrophoresis and matrix assisted laser desorption ionization time of flight mass spectrometry.

scientific article

Direct matrix assisted laser desorption ionization mass spectrometry-based analysis of wine as a powerful tool for classification purposes

scientific article

EvoPPI 1.0: a Web Platform for Within- and Between-Species Multiple Interactome Comparisons and Application to Nine PolyQ Proteins Determining Neurodegenerative Diseases

scientific article published on 01 February 2019

Fast human serum profiling through chemical depletion coupled to gold-nanoparticle-assisted protein separation

scientific article

GC4S: A bioinformatics-oriented Java software library of reusable graphical user interface components

scientific article published in PLoS ONE

Indirect ultrasonication for protein quantification and peptide mass mapping through mass spectrometry-based techniques

LA-iMageS: a software for elemental distribution bioimaging using LA-ICP-MS data

scientific article (publication date: 2016)

Large Scale Analyses and Visualization of Adaptive Amino Acid Changes Projects.

scientific article published on 30 January 2018

Mass spectrometry-based fingerprinting of proteins & peptides in wine quality control: a critical overview.

scientific article

Mass-Up: an all-in-one open software application for MALDI-TOF mass spectrometry knowledge discovery.

scientific article

Multiple independent L-gulonolactone oxidase (GULO) gene losses and vitamin C synthesis reacquisition events in non-Deuterostomian animal species.

scientific article

On the Development of a Pipeline for the Automatic Detection of Positively Selected Sites

article

PanDrugs: a novel method to prioritize anticancer drug treatments according to individual genomic data.

scientific article

Patterns of evolution at the gametophytic self-incompatibility Sorbus aucuparia (Pyrinae) S pollen genes support the non-self recognition by multiple factors model

scientific article (publication date: May 2013)

PileLine: a toolbox to handle genome position information in next-generation sequencing studies

scientific article published on January 24, 2011

PileLineGUI: a desktop environment for handling genome position files in next-generation sequencing studies

scientific article published on June 6, 2011

S2P: A software tool to quickly carry out reproducible biomedical research projects involving 2D-gel and MALDI-TOF MS protein data.

scientific article

Sequential depletion coupled to C18 sequential extraction as a rapid tool for human serum multiple profiling.

scientific article

Speeding up the screening of steroids in urine: development of a user-friendly library.

scientific article

The Drosophila melanogaster methuselah gene: a novel gene with ancient functions

scientific article

Web scraping technologies in an API world

scientific article published on 30 April 2013

geneCommittee: a web-based tool for extensively testing the discriminatory power of biologically relevant gene sets in microarray data classification

scientific article