List of works - Sophie Sacquin-Mora

Assessing the effect of dynamics on the closed-loop protein-folding hypothesis

scientific article

Bridging Enzymatic Structure Function via Mechanics: A Coarse-Grain Approach

scientific article published on 9 June 2016

Charge recombination kinetics and protein dynamics in wild type and carotenoid-less bacterial reaction centers: studies in trehalose glasses

scientific article

Coarse-grain simulations on NMR conformational ensembles highlight functional residues in proteins

scientific article published on 10 July 2019

Conformational Stability Adaptation of a Double-Stranded RNA-Binding Domain to Transfer RNA Ligand

scientific article published on 10 May 2019

Determinants of neuroglobin plasticity highlighted by joint coarse-grained simulations and high pressure crystallography

scientific article published on 12 May 2017

Docking Peptides on Proteins: How to Open a Lock, in the Dark, with a Flexible Key.

scientific article published in August 2015

Enzyme closure and nucleotide binding structurally lock guanylate kinase.

scientific article

Fold and flexibility: what can proteins' mechanical properties tell us about their folding nucleus?

scientific article

Frontier Residues Lining Globin Internal Cavities Present Specific Mechanical Properties

scientific article published on 17 May 2011

Functional modes and residue flexibility control the anisotropic response of guanylate kinase to mechanical stress

scientific article published on November 2010

Great interactions: How binding incorrect partners can teach us about protein recognition and function

scientific article published on 10 June 2016

Heme orientation modulates histidine dissociation and ligand binding kinetics in the hexacoordinated human neuroglobin.

scientific article published on 8 November 2012

Hidden partners: Using cross-docking calculations to predict binding sites for proteins with multiple interactions

scientific article published on 24 April 2018

Identification of protein interaction partners and protein-protein interaction sites

scientific article published on 7 August 2008

Investigating the Structural Variability and Binding Modes of the Glioma Targeting NFL-TBS.40-63 Peptide on Tubulin.

scientific article

Investigating the local flexibility of functional residues in hemoproteins.

scientific article published on 20 January 2006

Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling

scientific article

Locating the active sites of enzymes using mechanical properties

scientific article published on 01 May 2007

Mechanical variations in proteins with large-scale motions highlight the formation of structural locks

scientific article published on 28 May 2018

Meet-U: Educating through research immersion.

scientific article published on 15 March 2018

Mobility and Core-Protein Binding Patterns of Disordered C-Terminal Tails in β-Tubulin Isotypes.

scientific article

Modeling the mechanical response of proteins to anisotropic deformation.

scientific article published in January 2009

Multiscale Simulations Give Insight into the Hydrogen In and Out Pathways of [NiFe]-Hydrogenases from Aquifex aeolicus and Desulfovibrio fructosovorans

scientific article published on 21 November 2014

Nanoscopic liquid bridges exposed to a torsional strain

scientific article published on 15 December 2003

Probing the Flexibility of the Bacterial Reaction Center: The Wild-Type Protein Is More Rigid Than Two Site-Specific Mutants

scientific article published on 04 December 2007

Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information

scientific article (publication date: 2013)

Relating the diffusion of small ligands in human neuroglobin to its structural and mechanical properties

scientific article published in December 2009

The weak, fluctuating, dipole moment of membrane-bound hydrogenase from Aquifex aeolicus accounts for its adaptability to charged electrodes

scientific article published on 01 June 2014

Torsion-induced phase transitions in fluids confined between chemically decorated substrates

scientific article published on 01 November 2004

List of works by Sophie Sacquin-Mora

Assessing the effect of dynamics on the closed-loop protein-folding hypothesis

Bridging Enzymatic Structure Function via Mechanics: A Coarse-Grain Approach

Charge recombination kinetics and protein dynamics in wild type and carotenoid-less bacterial reaction centers: studies in trehalose glasses

Coarse-grain simulations on NMR conformational ensembles highlight functional residues in proteins

Conformational Stability Adaptation of a Double-Stranded RNA-Binding Domain to Transfer RNA Ligand

Determinants of neuroglobin plasticity highlighted by joint coarse-grained simulations and high pressure crystallography

Docking Peptides on Proteins: How to Open a Lock, in the Dark, with a Flexible Key.

Enzyme closure and nucleotide binding structurally lock guanylate kinase.

Fold and flexibility: what can proteins' mechanical properties tell us about their folding nucleus?

Frontier Residues Lining Globin Internal Cavities Present Specific Mechanical Properties

Functional modes and residue flexibility control the anisotropic response of guanylate kinase to mechanical stress

Great interactions: How binding incorrect partners can teach us about protein recognition and function

Heme orientation modulates histidine dissociation and ligand binding kinetics in the hexacoordinated human neuroglobin.

Hidden partners: Using cross-docking calculations to predict binding sites for proteins with multiple interactions

Identification of protein interaction partners and protein-protein interaction sites

Investigating the Structural Variability and Binding Modes of the Glioma Targeting NFL-TBS.40-63 Peptide on Tubulin.

Investigating the local flexibility of functional residues in hemoproteins.

Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling

Locating the active sites of enzymes using mechanical properties

Mechanical variations in proteins with large-scale motions highlight the formation of structural locks

Meet-U: Educating through research immersion.

Mobility and Core-Protein Binding Patterns of Disordered C-Terminal Tails in β-Tubulin Isotypes.

Modeling the mechanical response of proteins to anisotropic deformation.

Multiscale Simulations Give Insight into the Hydrogen In and Out Pathways of [NiFe]-Hydrogenases from Aquifex aeolicus and Desulfovibrio fructosovorans

Nanoscopic liquid bridges exposed to a torsional strain

Probing the Flexibility of the Bacterial Reaction Center: The Wild-Type Protein Is More Rigid Than Two Site-Specific Mutants

Protein-protein interactions in a crowded environment: an analysis via cross-docking simulations and evolutionary information

Relating the diffusion of small ligands in human neuroglobin to its structural and mechanical properties

The weak, fluctuating, dipole moment of membrane-bound hydrogenase from Aquifex aeolicus accounts for its adaptability to charged electrodes

Torsion-induced phase transitions in fluids confined between chemically decorated substrates