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List of works by Helena Paula Brentani

A Set of miRNAs, Their Gene and Protein Targets and Stromal Genes Distinguish Early from Late Onset ER Positive Breast Cancer

scientific article

A feature selection approach for identification of signature genes from SAGE data.

scientific article

A prion-linked psychiatric disorder

scientific article published in November 1997

Abstract 186: RHOA, RAC1 and PAK1 evaluation in paired stromal fibroblasts of breast cancer primary and of lymph node metastasis: Importance of these biomarkers in lymph node invasion

Abstract 3038: Determination of microRNA expression profile in tumors from young women with breast cancer

Abstract 3427: Temporal analysis of kidney differentiation and Wilms tumor revealed conserved transcriptional mechanisms and pointed genes putatively determinant for tumor onset

article

Abstract 3984: An integrated approach to study large-scale expression analysis, copy number alterations and epigenetic profiles in cancer

Abstract 532: A transcriptional sketch of breast cancer fibroblasts: The validation of cDNA libraries for expression profile study using a high-throughput sequencing technology

African ancestry protects against Alzheimer's disease-related neuropathology

scientific article

Altered oxygen metabolism associated to neurogenesis of induced pluripotent stem cells derived from a schizophrenic patient

scientific article published in January 2012

Amygdala and Hypothalamus: Historical Overview With Focus on Aggression.

scientific article

Amyloid-β oligomers induce differential gene expression in adult human brain slices

scientific article published on 10 January 2012

An assessment of hair cortisol among postpartum Brazilian mothers and infants from a high-risk community in São Paulo: Intra-individual stability and association in mother-infant dyads.

scientific article published on 23 August 2017

An inherited small microdeletion at 15q13.3 in a patient with early-onset obsessive-compulsive disorder

scientific article

An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in Attention-Deficit/Hyperactivity Disorder

scientific article published on 7 March 2016

Analysis of shared heritability in common disorders of the brain

scientific article published on 21 June 2018

Assessment of complementarity of WGCNA and NERI results for identification of modules associated to schizophrenia spectrum disorders

scientific article published in PLoS ONE

Association study between functional polymorphisms in the TNF-alpha gene and obsessive-compulsive disorder

scientific article published on February 2012

Attention-based classification pattern, a research domain criteria framework, in youths with bipolar disorder and attention-deficit/hyperactivity disorder

scientific article published on 12 November 2014

Autism spectrum disorders: an overview on diagnosis and treatment

scientific article published on January 2013

Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE).

scientific article

Brain areas involved with obsessive-compulsive disorder present different DNA methylation modulation

scientific article published on 30 October 2021

Brazil and Autism

article

Breast cancer tissue slices as a model for evaluation of response to rapamycin ⬇️

scientific article published on May 1, 2013

Can loss-of-function prion-related diseases exist?

scientific article published in May 1998

Caregiver depression is associated with hair cortisol in a low-income sample of preschool-aged children

scientific article published on 22 April 2020

Caucasians and Africans have different susceptibility to neuritic plaques: A population-based clinicopathological study using genetic ancestry-informative markers

Co-expression network of neural-differentiation genes shows specific pattern in schizophrenia

scientific article published on 16 May 2015

Cohort profile: São Paulo Western Region Birth Cohort (ROC)

scientific article published on 13 October 2020

Comprehensive analysis of BRCA1, BRCA2 and TP53 germline mutation and tumor characterization: a portrait of early-onset breast cancer in Brazil

scientific article

Copy number variation in obsessive-compulsive disorder and tourette syndrome: a cross-disorder study

scientific article

Correction: Poly (A)+Transcriptome Assessment of ERBB2-Induced Alterations in Breast Cell Lines

scientific article published in PLoS ONE

Corrigendum: An integrative approach to investigate the respective roles of single-nucleotide variants and copy-number variants in Attention-Deficit/Hyperactivity Disorder

scientific article published on 24 May 2016

Cross-disorder genome-wide analyses suggest a complex genetic relationship between Tourette's syndrome and OCD.

scientific article

DNA methylation landscape of hepatoblastomas reveals arrest at early stages of liver differentiation and cancer-related alterations.

scientific article published on 25 December 2016

Decrease of PTEN expression levels among normal, symptomatic and asymptomatic Alzheimer's disease (Ad) subjects, measured in hippocampus, temporal and entorhinal cortices

scholarly article by Ana Cecília Feio dos Santos et al published July 2011 in Alzheimer's and Dementia

Decreased AIRE expression and global thymic hypofunction in Down syndrome.

scientific article

Detecting dissonance in clinical and research workflow for translational psychiatric registries

scientific article

Differences in transcriptional effects of 1α,25 dihydroxyvitamin D3 on fibroblasts associated to breast carcinomas and from paired normal breast tissues ⬇️

scientific article published on August 23, 2012

Differential DNA Methylation of MicroRNA Genes in Temporal Cortex from Alzheimer's Disease Individuals.

scientific article published on 26 April 2016

Differential gene expression between the biotrophic-like and saprotrophic mycelia of the witches' broom pathogen Moniliophthora perniciosa

scientific article

Differential levels of inflammatory and neuroendocrine markers in the hippocampus and anterior cingulate cortex of bipolar disorder subjects: a post-mortem study

scientific article published on 16 September 2020

Disequilibrium Coefficient: A Bayesian Perspective

Drug repositioning for psychiatric and neurological disorders through a network medicine approach

scientific article published on 12 May 2020

Editorial: Polygenic Risk as a Biomarker for Attention-Deficit/Hyperactivity Disorder

scientific article published on 06 February 2020

Effects of Maternal Psychopathology and Education Level on Neurocognitive Development in Infants of Adolescent Mothers Living in Poverty in Brazil

scientific article published on 22 May 2019

Epigenetic evidence for involvement of the oxytocin receptor gene in obsessive-compulsive disorder

scientific article

Epigenetic silencing of CRABP2 and MX1 in head and neck tumors

scientific article published on December 2009

Epigenetics insights into chronic pain

article

Epithelial cells captured from ductal carcinoma in situ reveal a gene expression signature associated with progression to invasive breast cancer

scientific article

Estrogen-responsive genes overlap with triiodothyronine-responsive genes in a breast carcinoma cell line

article

Evaluation of quantitative rt-PCR using nonamplified and amplified RNA.

scientific article

Evaluation of retinoblastoma protein expression in asymptomatic and symptomatic Alzheimer's disease and normal elderly subjects

Evidence that molecular changes in cells occur before morphological alterations during the progression of breast ductal carcinoma

scientific article

Expression Profile of Malignant and Nonmalignant Lesions of Esophagus and Stomach: Differential Activity of Functional Modules Related to Inflammation and Lipid Metabolism

scientific article published on 01 August 2005

Expression of human papillomavirus type 16 E7 oncoprotein alters keratinocytes expression profile in response to tumor necrosis factor-alpha

scientific article published on 30 December 2009

Expression profile of malignant and non-malignant diseases of the thyroid gland reveals altered expression of a common set of genes in goiter and papillary carcinomas.

scientific article

Expression profile of rat hippocampal neurons treated with the neuroprotective compound 2,4-dinitrophenol: up-regulation of cAMP signaling genes.

scientific article published in December 2009

From Tissue Samples to Tumor Markers

Gene Expression Profile in Response to Doxorubicin–Rapamycin Combined Treatment of HER-2–Overexpressing Human Mammary Epithelial Cell Lines ⬇️

scientific article published on November 14, 2011

Gene expression alterations in the postmortem hippocampus from older patients with bipolar disorder – A hypothesis generating study

scientific article published in 2023

Gene expression analysis of blastemal component reveals genes associated with relapse mechanism in Wilms tumour

scientific article published on 22 June 2011

Gene expression arrays in cancer research: methods and applications

scientific article

Gene expression in blood of children and adolescents: Mediation between childhood maltreatment and major depressive disorder

scientific article published on 22 March 2017

Gene expression of peripheral blood lymphocytes may discriminate patients with schizophrenia from controls

article

Gene expression profile associated with response to doxorubicin-based therapy in breast cancer

scientific article published in October 2005

Gene expression profile of residual breast cancer after doxorubicin and cyclophosphamide neoadjuvant chemotherapy

article

Gene expression profiling of clinical stages II and III breast cancer

article

Gene stage-specific expression in the microenvironment of pediatric myelodysplastic syndromes.

scientific article

Gene trio signatures as molecular markers to predict response to doxorubicin cyclophosphamide neoadjuvant chemotherapy in breast cancer patients

scientific article

Generation of iPS cell lines from schizophrenia patients using a non-integrative method

scientific article published on 25 May 2016

Genome-wide DNA methylation profile in the peripheral blood of cocaine and crack dependents

scientific article published on 01 November 2019

Genome-wide DNA methylation profile of leukocytes from melanoma patients with and without CDKN2A mutations

scientific article published on 16 September 2014

Germline DNA copy number variation in familial and early-onset breast cancer

scientific article

HOXB7 mRNA is overexpressed in pancreatic ductal adenocarcinomas and its knockdown induces cell cycle arrest and apoptosis

scientific article

High Heritability of Telomere Length In Families With Bipolar Disorder

High risk cohort study for psychiatric disorders in childhood: rationale, design, methods and preliminary results.

scientific article published on 3 December 2014

Hippocampal CA3 transcriptome signature correlates with initial precipitating injury in refractory mesial temporal lobe epilepsy

scientific article published in 2011

Identification of FAM46D as a novel cancer/testis antigen using EST data and serological analysis.

scientific article published on 18 June 2009

Identification of protein expression signatures in gastric carcinomas using clustering analysis

scientific article

Influence of the interaction between nodal fibroblast and breast cancer cells on gene expression

scientific article

Initial findings of striatum tripartite model in OCD brain samples based on transcriptome analysis

scientific article published on 28 February 2019

Innate immune response is differentially dysregulated between bipolar disease and schizophrenia

scientific article published on 6 December 2014

Integrative Variation Analysis Reveals that a Complex Genotype May Specify Phenotype in Siblings with Syndromic Autism Spectrum Disorder

scientific article

Intermittent theta-burst transcranial magnetic stimulation for autism spectrum disorder: an open-label pilot study

scientific article published on 11 December 2017

Layer-specific reduced neuronal density in the orbitofrontal cortex of older adults with obsessive-compulsive disorder

article

Linear mRNA amplification approach for RNAseq from limited amount of RNA.

scientific article published on 28 March 2015

Longitudinal Changes After Amygdala Surgery for Intractable Aggressive Behavior: Clinical, Imaging Genetics, and Deformation-Based Morphometry Study-A Case Series

scientific article published on 07 October 2020

Low brain-derived neurotrophic factor levels in post-mortem brains of older adults with depression and dementia in a large clinicopathological sample

scientific article published on 09 August 2018

Maternal Parenting Electronic Diary in the Context of a Home Visit Intervention for Adolescent Mothers in an Urban Deprived Area of São Paulo, Brazil: Randomized Controlled Trial

scientific article published on 28 July 2020

MicroRNAs discriminate familial from sporadic non-BRCA1/2 breast carcinoma arising in patients ≤35 years.

scientific article

Mining Novel Candidate Imprinted Genes Using Genome-Wide Methylation Screening and Literature Review

article

Mining ORESTES no-match database: can we still contribute to cancer transcriptome?

scientific article published on 31 March 2006

Molecular profiling of isolated histological components of wilms tumor implicates a common role for the Wnt signaling pathway in kidney and tumor development

scientific article

Multidimensional integrative analysis uncovers driver candidates and biomarkers in penile carcinoma

scientific article

Multiview Clustering on PPI Network for Gene Selection and Enrichment from Microarray Data

article

NDRG4 promoter hypermethylation is a mechanistic biomarker associated with metastatic progression in breast cancer patients

scientific article published on 05 April 2019

NERI: network-medicine based integrative approach for disease gene prioritization by relative importance

scientific article published on 16 December 2015

Network-Based Disease Gene Prioritization by Hitting Time Analysis

article

Neuronal-Glial Interaction in a Triple-Transgenic Mouse Model of Alzheimer's Disease: Gene Ontology and Lithium Pathways

scientific article published on 01 December 2020

No-match ORESTES explored as tumor markers

scientific article published on 6 March 2009

ORESTES are enriched in rare exon usage variants affecting the encoded proteins

scientific article published in October 2003

Odorant receptor genes are expressed in olfactory neuroblastoma.

scientific article published on 10 September 2013

Overall and Sex-Specific Associations Between Fetal Adversity and Child Development at Age 1 Year: Evidence From Brazil

Oxytocin and Gynecomastia: Correlation or Causality?

scientific article published on 21 May 2018

P5-06-03: Gene Expression Associated with Breast Cancer Primary and Secondary Resistance to Neoadjuvant Chemotherapy

article

Poly (A)+ transcriptome assessment of ERBB2-induced alterations in breast cell lines

scientific article

Pregabalin for the Prevention of Oxaliplatin-Induced Painful Neuropathy: A Randomized, Double-Blind Trial

scientific article

Procedures and compliance of a video modeling applied behavior analysis intervention for Brazilian parents of children with autism spectrum disorders.

scientific article published in March 2017

Putative contributions of the sex chromosome proteins SOX3 and SRY to neurodevelopmental disorders

scientific article published on 09 December 2018

Reciprocal changes in gene expression profiles of cocultured breast epithelial cells and primary fibroblasts.

scientific article published on December 2009

Redução dos níveis séricos de ácido fólico em pacientes com a doença de Alzheimer

Refractoriness of aggressive behaviour to pharmacological treatment: cortical thickness analysis in autism spectrum disorder

scientific article published on 07 August 2020

Refractoriness of aggressive behaviour to pharmacological treatment: cortical thickness analysis in autism spectrum disorder - ERRATUM

scientific article published on 27 August 2020

Repair of oxidative DNA damage, cell-cycle regulation and neuronal death may influence the clinical manifestation of Alzheimer's disease

scientific article

Schedule for Affective Disorders and Schizophrenia for School-Age Children - Present and Lifetime Version (K-SADS-PL), DSM-5 update: translation into Brazilian Portuguese

scientific article published in October 2017

Sex differences in DNA methylation of the cord blood are related to sex-bias psychiatric diseases

scientific article published on 17 March 2017

Shortest paths ranking methodology to identify alterations in PPI networks of complex diseases

Simcluster: clustering enumeration gene expression data on the simplex space

scientific article

Specific upregulation of RHOA and RAC1 in cancer-associated fibroblasts found at primary tumor and lymph node metastatic sites in breast cancer

scientific article

Statistical Methods in Serial Analysis of Gene Expression (Sage)

article

Synchronous down-modulation of miR-17 family members is an early causative event in the retinal angiogenic switch

scientific article

TNF-alpha and melphalan modulate a specific group of early expressed genes in a murine melanoma model

scientific article published on 25 March 2013

TRANSLATION, CULTURAL ADAPTATION, AND EVIDENCE OF INSTRUMENT VALIDITY FOR A MORPHOLOGICAL EXAMINATION PERFORMED IN CHILDREN WITH AUTISM SPECTRUM DISORDER

scientific article published on 13 January 2020

TWIST1 is a molecular marker for a poor prognosis in oral cancer and represents a potential therapeutic target

scientific article published on 21 October 2013

Temporal blastemal cell gene expression analysis in the kidney reveals new Wnt and related signaling pathway genes to be essential for Wilms' tumor onset

scientific article

The FAPESP/LICR Human Cancer Genome Project: Perspectives on Integration

The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags

scientific article published on 30 October 2003

The value of a tumor bank in the development of cancer research in Brazil: 13 years of experience at the a C camargo hospital

scientific article

Transcriptional alterations related to neuropathology and clinical manifestation of Alzheimer's disease.

scientific article

Transcriptional profile of fibroblasts obtained from the primary site, lymph node and bone marrow of breast cancer patients

scientific article

Transcriptome signature of the adult mouse choroid plexus

scientific article published on 18 January 2011

Tumor slices as a model to evaluate doxorubicin in vitro treatment and expression of trios of genes PRSS11, MTSS1, CLPTM1 and PRSS11, MTSS1, SMYD2 in canine mammary gland cancer.

scientific article published on 4 July 2008

Using credibility intervals instead of hypothesis tests in SAGE analysis

scientific article published in December 2003

Whole-exome sequencing in obsessive-compulsive disorder identifies rare mutations in immunological and neurodevelopmental pathways

scientific article published on 29 March 2016

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