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List of works by Kimberlee A Musser

491. Working Together: A Tale of Carbapenemase-Producing Organism Investigations in Three New York City Nursing Homes

A Bioinformatic Pipeline for Improved Genome Analysis and Clustering of Isolates during Outbreaks of Legionnaires' Disease

scientific article published on 25 November 2020

A Large Community Outbreak of Legionnaires' Disease Associated With a Cooling Tower in New York City, 2015.

scientific article published on January 2017

A Model of Shared Mycobacteriology Testing Services: Lessons Learned

scientific article

A multiplexed real-time PCR assay for rapid detection of Chlamydia trachomatis and identification of serovar L-2, the major cause of Lymphogranuloma venereum in New York.

scientific article published on 06 March 2006

A novel vehicle for transmission of Escherichia coli O157:H7 to humans: multistate outbreak of E. coli O157:H7 infections associated with consumption of ready-to-bake commercial prepackaged cookie dough--United States, 2009.

scientific article published on 8 December 2011

A real-time multiplexed PCR assay for rapid detection and differentiation of Campylobacter jejuni and Campylobacter coli

scientific article

A whole-genome single nucleotide polymorphism-based approach to trace and identify outbreaks linked to a common Salmonella enterica subsp. enterica serovar Montevideo pulsed-field gel electrophoresis type

scientific article published on 14 October 2011

Analysis of Escherichia coli O157 clinical isolates by multilocus sequence typing

scientific article

Assessing Nanopore sequencing for clinical diagnostics: A comparison of NGS methods for Mycobacterium tuberculosis

scientific article published on 14 October 2020

Clinical and laboratory characteristics of Clostridium difficile infection in patients with discordant diagnostic test results

scientific article published on 11 January 2012

Combined real-time PCR and rpoB gene pyrosequencing for rapid identification of Mycobacterium tuberculosis and determination of rifampin resistance directly in clinical specimens

scientific article

Community-associated methicillin-resistant Staphylococcus aureus skin infections in a religious community

scientific article

Comparison of premier CAMPY enzyme immunoassay (EIA), ProSpecT Campylobacter EIA, and ImmunoCard STAT! CAMPY tests with culture for laboratory diagnosis of Campylobacter enteric infections

scientific article published on September 2010

Complete Genome Sequences of Three Outbreak-Associated Legionella pneumophila Isolates.

scientific article published on 21 July 2016

Comprehensive Whole-Genome Sequencing and Reporting of Drug Resistance Profiles on Clinical Cases of Mycobacterium tuberculosis in New York State

scientific article

Correction for Shewmaker et al., Evaluation of Methods for Identification and Determination of the Taxonomic Status of Strains Belonging to the Streptococcus porcinus-Streptococcus pseudoporcinus Complex Isolated from Animal, Human, and Dairy Source

scientific article published on 28 December 2016

Design and implementation of a protocol for the detection of Legionella in clinical and environmental samples

scientific article published on 14 July 2008

Detection of Borrelia miyamotoi and other tick-borne pathogens in human clinical specimens and Ixodes scapularis ticks in New York State, 2012-2015.

scientific article published on 16 January 2017

Detection of Mycobacterium avium complex DNA directly in clinical respiratory specimens: opportunities for improved turn-around time and cost savings

scientific article published on 30 January 2014

Detection, isolation, and molecular subtyping of Escherichia coli O157:H7 and Campylobacter jejuni associated with a large waterborne outbreak

scientific article

Development and evaluation of a 4-target multiplex real-time polymerase chain reaction assay for the detection and characterization of Yersinia pestis

scientific article published on September 2006

Direct molecular testing to assess the incidence of meningococcal and other bacterial causes of meningitis among persons reported with unspecified bacterial meningitis

scientific article published on 16 June 2015

Donor-derived transmission through lung transplantation of carbapenem-resistant Acinetobacter baumannii producing the OXA-23 carbapenemase during an ongoing healthcare facility outbreak

scientific article published on 08 February 2020

Draft Genome Sequence of Branchiibius sp. NY16-3462-2, Isolated from a Mixed Clinical Sample

scientific article published on 12 May 2016

Enhanced identification and characterization of non-O157 Shiga toxin-producing Escherichia coli: a six-year study

scientific article published on 25 September 2012

Evaluation of a single-tube multiplex real-time PCR for differentiation of members of the Mycobacterium tuberculosis complex in clinical specimens.

scientific article published on 18 May 2011

Evaluation of methods for identification and determination of the taxonomic status of strains belonging to the Streptococcus porcinus-Streptococcus pseudoporcinus complex isolated from animal, human, and dairy sources

scientific article

Evaluation of the RIDAQuick norovirus immunochromatographic test kit.

scientific article published on 09 January 2012

Genomic Epidemiology of Historical Clostridium perfringens Outbreaks in New York State Using Two Web-based Platforms: National Center for Biotechnology Information-Pathogen Detection and FDA-GalaxyTrakr

scientific article published on 11 November 2020

Genomic Resolution of Outbreak-Associated Legionella pneumophila Serogroup 1 Isolates from New York State.

scientific article published on 8 April 2016

Ground beef recall associated with non-O157 Shiga toxin-producing Escherichia coli, United States.

scientific article

Hazenella coriacea gen. nov., sp. nov., isolated from clinical specimens

scientific article

High-level vancomycin-resistant Staphylococcus aureus isolates associated with a polymicrobial biofilm

scientific article

Implementation of Salmonella serotype determination using pulsed-field gel electrophoresis in a state public health laboratory

scientific article published on 5 May 2016

Implementing the Bruker MALDI Biotyper in the Public Health Laboratory for C. botulinum Neurotoxin Detection

scientific article

Insights into the long-term persistence of Legionella in facilities from whole-genome sequencing

scientific article published on 31 July 2018

Investigation of a Cluster of Sphingomonas koreensis Infections

scientific article published on 01 December 2018

Laboratory confirmation of generalized vaccinia following smallpox vaccination

scientific article published on March 2004

Legionnaires' Disease Outbreak Caused by Endemic Strain of Legionella pneumophila, New York, New York, USA, 2015

scientific article

Low-level rifampin resistance and rpoB mutations in Mycobacterium tuberculosis: An analysis of whole-genome sequencing and drug susceptibility test data in New York

scientific article published on 30 September 2020

Multiplex diagnostic platforms for detection of biothreat agents.

scientific article

Nanopore MinION Sequencing Reveals Possible Transfer of bla KPC-2 Plasmid Across Bacterial Species in Two Healthcare Facilities

scientific article published on 19 August 2020

Neisseria dumasiana sp. nov. from human sputum and a dog's mouth

scientific article published on 21 September 2017

Neisseria oralis sp. nov., isolated from healthy gingival plaque and clinical samples.

scientific article

Neisseria wadsworthii sp. nov. and Neisseria shayeganii sp. nov., isolated from clinical specimens

scientific article

Neonatal Conjunctivitis Caused by Neisseria meningitidis US Urethritis Clade, New York, USA, August 2017

scholarly article by Cecilia B Kretz et al published May 2019 in Emerging Infectious Diseases

Notes from the Field: Nontuberculous Mycobacteria Infections in U.S. Medical Tourists Associated with Plastic Surgery - Dominican Republic, 2017.

scientific article

Novel Assays/Applications for Patients Suspected of Mycobacterial Diseases

scientific article published on 06 October 2020

Paracoccus sanguinis sp. nov., isolated from clinical specimens of New York State patients.

scientific article

Performance of the G4 Xpert® MTB/RIF assay for the detection of Mycobacterium tuberculosis and rifampin resistance: a retrospective case-control study of analytical and clinical samples from high- and low-tuberculosis prevalence settings

scientific article

Pertactin-negative variants of Bordetella pertussis in New York State: a retrospective analysis, 2004-2013.

scientific article

Postmortem diagnosis of invasive meningococcal disease

scientific article published on March 2014

Premarket evaluations of the IMDx C. difficile for Abbott m2000 Assay and the BD Max Cdiff Assay

scientific article

Psychrobacter sanguinis sp. nov., recovered from four clinical specimens over a 4-year period

scientific article

Public health approach to detection of non-O157 Shiga toxin-producing Escherichia coli: summary of two outbreaks and laboratory procedures.

scientific article published on 5 May 2011

Rapid molecular characterization of Clostridium difficile and assessment of populations of C. difficile in stool specimens.

scientific article published on 29 April 2009

Rapid prediction of inducible clarithromycin resistance in Mycobacterium abscessus.

scientific article published on 31 August 2015

Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis

scientific article

Real-time PCR and pyrosequencing for differentiation of medically relevant Bartonella species

scientific article published in September 2012

Revised Interpretation of the Hain Lifescience GenoType MTBC To Differentiate Mycobacterium canettii and Members of the Mycobacterium tuberculosis Complex

scientific article published on 24 May 2019

Sporosarcina newyorkensis sp. nov. from clinical specimens and raw cow's milk.

scientific article

Two cases of adult botulism caused by botulinum neurotoxin producing Clostridium baratii.

scientific article published on 18 October 2014

Use of a multiplex molecular beacon platform for rapid detection of methicillin and vancomycin resistance in Staphylococcus aureus

scientific article published on September 2005

Use of multiple-locus variable number tandem repeat analysis and phage typing for subtyping of Salmonella Enteritidis from sporadic human cases in the United States

scientific article published on 20 July 2009

Utilization of a real-time PCR approach for Haemophilus influenzae serotype determination as an alternative to the slide agglutination test

scientific article

Whole-Genome Single-Nucleotide Polymorphism (SNP) Analysis Applied Directly to Stool for Genotyping Shiga Toxin-Producing Escherichia coli: an Advanced Molecular Detection Method for Foodborne Disease Surveillance and Outbreak Tracking

scientific article published on 25 June 2019

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