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List of works by Jan Huisken

3Dscript: animating 3D/4D microscopy data using a natural-language-based syntax

scientific article published on 01 April 2019

A conserved regulatory program drives emergence of the lateral plate mesoderm

A conserved regulatory program initiates lateral plate mesoderm emergence across chordates

scientific article published on 26 August 2019

A dual role for ErbB2 signaling in cardiac trabeculation

scientific article

A guide to light-sheet fluorescence microscopy for multiscale imaging

scientific article published on March 2017

Adaptable, illumination patterning light sheet microscopy.

scientific article

Basal extrusion drives cell invasion and mechanical stripping of E-cadherin

Cell-Accurate Optical Mapping Across The Entire Developing Heart

Cell-accurate optical mapping across the entire developing heart.

scientific article published on 29 December 2017

Continuous addition of progenitors forms the cardiac ventricle in zebrafish.

scientific article published on 21 May 2018

Continuous high-resolution in vivo imaging reveals tumor-specific dissemination in an embryonic zebrafish xenograft model

Cse1l is a negative regulator of CFTR-dependent fluid secretion

scientific article published on 7 October 2010

Dynamic and non-contact 3D sample rotation for microscopy

scientific article published in Nature Communications

Dynamic, non-contact 3D sample rotation for microscopy

Endothelial cell self-fusion during vascular pruning

scientific article (publication date: April 2015)

Endothelial cells form transient Notch-dependent NO-containing cystic structures during zebrafish cerebrovascular development

Even fluorescence excitation by multidirectional selective plane illumination microscopy (mSPIM).

scientific article

Fast Fluorescence Microscopy with Light Sheets

scientific article published on August 2016

Fibrillin-2b regulates endocardial morphogenesis in zebrafish

scientific article

Genetic and physiologic dissection of the vertebrate cardiac conduction system

scientific article

Genetic evidence for a noncanonical function of seryl-tRNA synthetase in vascular development

scientific article published on 7 May 2009

Genome-wide RNA Tomography in the zebrafish embryo

scientific article published in October 2014

Guide to light-sheet microscopy for adventurous biologists

scientific article published in January 2015

High-resolution reconstruction of the beating zebrafish heart

scientific article

High-speed imaging of developing heart valves reveals interplay of morphogenesis and function.

scientific article

High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics

scientific article

Hyperspectral light sheet microscopy

scientific article

Image quality guided smart rotation improves coverage in microscopy

scientific article published on 09 January 2020

In vivo imaging of cardiac development and function in zebrafish using light sheet microscopy

scientific article published on 23 December 2015

Label-free redox imaging of patient-derived organoids using selective plane illumination microscopy

scientific article published on 16 April 2020

Light sheet microscopy

scientific article published in January 2014

Light sheet microscopy for real-time developmental biology

scientific article published on 30 September 2011

Long-term in vivo imaging reveals tumor-specific dissemination and captures host tumor interaction in zebrafish xenografts

scientific article published on 06 August 2020

Loss of the Polycomb group protein Rnf2 results in derepression of tbx-transcription factors and defects in embryonic and cardiac development

scientific article published on 13 March 2019

Mechanical Coupling between Endoderm Invagination and Axis Extension in Drosophila

scientific article

Meeting in the Middle: Towards Successful Multidisciplinary Bioimage Analysis Collaboration

scientific article published on 14 April 2022

Multi-sample SPIM image acquisition, processing and analysis of vascular growth in zebrafish

Multi-sample SPIM image acquisition, processing and analysis of vascular growth in zebrafish

scientific article published on 21 March 2019

Multi-scale imaging and analysis identify pan-embryo cell dynamics of germlayer formation in zebrafish

scientific article published on 17 December 2019

Multi-view image fusion improves resolution in three-dimensional microscopy

scientific article published in June 2007

Multilayer mounting enables long-term imaging of zebrafish development in a light sheet microscope

scientific article

Multilayer mounting for long-term light sheet microscopy of zebrafish

scientific article

Multiple imaging axis microscopy improves resolution for thick-sample applications.

scientific article

Multiple roles for Med12 in vertebrate endoderm development.

scientific article published on 4 March 2008

Omnidirectional microscopy ⬇️

scientific article published on June 28, 2012

OpenSPIM: an open-access light-sheet microscopy platform

scientific article published on 9 June 2013

Optical levitation of absorbing particles with a nominally Gaussian laser beam

scientific article

Optical scanning holography as a technique for high-resolution three-dimensional biological microscopy

scientific article published in September 2002

Optical sectioning deep inside live embryos by selective plane illumination microscopy

scientific article (publication date: 13 August 2004)

Optogenetic control of cardiac function

scientific article

Rapid 3D light-sheet microscopy with a tunable lens

scientific article

Real-time multi-view deconvolution

scientific article published on 25 June 2015

Regulation of neurocoel morphogenesis by Pard6 gamma b.

scientific article published on 9 September 2008

Selective plane illumination microscopy techniques in developmental biology

scientific article

Single continuous lumen formation in the zebrafish gut is mediated by smoothened-dependent tissue remodeling

scientific article

Slicing embryos gently with laser light sheets ⬇️

scientific article published on March 6, 2012

Spatial transcriptomics reveals antiparasitic targets associated with essential behaviors in the human parasite Brugia malayi

scientific article published on 07 April 2022

Standard metadata for 3D microscopy

scientific article published in 2022

Systematic analysis of vascular patterning in zebrafish

The Popeye domain containing 2 (popdc2) gene in zebrafish is required for heart and skeletal muscle development

scientific article

The extracellular domain of Smoothened regulates ciliary localization and is required for high-level Hh signaling

scientific article published on 21 May 2009

The smart and gentle microscope

scientific article published on August 2015

Transgenic zebrafish illuminate the dynamics of thyroid morphogenesis and its relationship to cardiovascular development

scientific article published on 26 September 2012

Zebrafish model for human long QT syndrome

scientific article

eduSPIM: Light Sheet Microscopy in the Museum

scientific article

linus: Conveniently explore, share, and present large-scale biological trajectory data in a web browser

scientific article published on 01 November 2021

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