List of works - Sarah E. Boyd

A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard

scientific article

Analysis of the minimal specificity of caspase-2 and identification of Ac-VDTTD-AFC as a caspase-2-selective peptide substrate

scientific article published on April 2014

Bioinformatic approaches for predicting substrates of proteases

scientific article published on February 2011

CARFMAP: A Curated Pathway Map of Cardiac Fibroblasts

scientific article published on 16 December 2015

Cascleave: towards more accurate prediction of caspase substrate cleavage sites

scientific article published on 3 February 2010

Characterization of a serine protease homologous to house dust mite group 3 allergens from the scabies mite Sarcoptes scabiei

scientific article published on 7 October 2009

Combinatorial Ranking of Gene Sets to Predict Disease Relapse: The Retinoic Acid Pathway in Early Prostate Cancer.

scientific article published on 15 March 2017

Computational characterization of 3' splice variants in the GFAP isoform family

scientific article

Cooperative effects in the substrate specificity of the complement protease C1s.

scientific article

Discovery of amino acid motifs for thrombin cleavage and validation using a model substrate

scientific article

Elucidation of the substrate specificity of the C1s protease of the classical complement pathway

scientific article published on 16 September 2005

Elucidation of the substrate specificity of the MASP-2 protease of the lectin complement pathway and identification of the enzyme as a major physiological target of the serpin, C1-inhibitor

scientific article

Erratum: The Systems Biology Graphical Notation

scholarly article published in Nature Biotechnology

Microarray profiling to analyse adult cardiac fibroblast identity

scientific article

PMAP: databases for analyzing proteolytic events and pathways

scientific article

PoPS: a computational tool for modeling and predicting protease specificity

scientific article published in June 2005

Software support for SBGN maps: SBGN-ML and LibSBGN.

scientific article

Subsite cooperativity in protease specificity

scientific article published on May 2009

Systems approaches in integrative cardiac biology: illustrations from cardiac heterocellular signalling studies.

scientific article

The protease allergen Der p 1 cleaves cell surface DC-SIGN and DC-SIGNR: experimental analysis of in silico substrate identification and implications in allergic responses

scientific article published in February 2007

VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery.

scientific article published on May 2015

View from the heart: cardiac fibroblasts in development, scarring and regeneration

scientific article

List of works by Sarah E. Boyd

A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard

Analysis of the minimal specificity of caspase-2 and identification of Ac-VDTTD-AFC as a caspase-2-selective peptide substrate

Bioinformatic approaches for predicting substrates of proteases

CARFMAP: A Curated Pathway Map of Cardiac Fibroblasts

Cascleave: towards more accurate prediction of caspase substrate cleavage sites

Characterization of a serine protease homologous to house dust mite group 3 allergens from the scabies mite Sarcoptes scabiei

Combinatorial Ranking of Gene Sets to Predict Disease Relapse: The Retinoic Acid Pathway in Early Prostate Cancer.

Computational characterization of 3' splice variants in the GFAP isoform family

Cooperative effects in the substrate specificity of the complement protease C1s.

Discovery of amino acid motifs for thrombin cleavage and validation using a model substrate

Elucidation of the substrate specificity of the C1s protease of the classical complement pathway

Elucidation of the substrate specificity of the MASP-2 protease of the lectin complement pathway and identification of the enzyme as a major physiological target of the serpin, C1-inhibitor

Erratum: The Systems Biology Graphical Notation

Microarray profiling to analyse adult cardiac fibroblast identity

PMAP: databases for analyzing proteolytic events and pathways

PoPS: a computational tool for modeling and predicting protease specificity

Software support for SBGN maps: SBGN-ML and LibSBGN.

Subsite cooperativity in protease specificity

Systems approaches in integrative cardiac biology: illustrations from cardiac heterocellular signalling studies.

The protease allergen Der p 1 cleaves cell surface DC-SIGN and DC-SIGNR: experimental analysis of in silico substrate identification and implications in allergic responses

VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery.

View from the heart: cardiac fibroblasts in development, scarring and regeneration