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List of works by Fredrik Westerlund

A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop

scientific article published on 10 September 2012

A nano flow cytometer for single lipid vesicle analysis.

scientific article

A nanofluidic device for parallel single nanoparticle catalysis in solution

scientific article published on 27 September 2019

A nanofluidic device for real-time visualization of DNA-protein interactions on the single DNA molecule level

scientific article published on 01 January 2019

A ruthenium dimer complex with a flexible linker slowly threads between DNA bases in two distinct steps.

scientific article

A simple cut and stretch assay to detect antimicrobial resistance genes on bacterial plasmids by single-molecule fluorescence microscopy

scientific article published on 03 June 2022

A single-step competitive binding assay for mapping of single DNA molecules

scientific article published on 7 December 2011

A versatile self-assembly strategy for the synthesis of shape-selected colloidal noble metal nanoparticle heterodimers.

scientific article

AT-dependent luminescence of DNA-threading ruthenium complexes

scientific article published on 3 May 2007

Annealing of ssDNA and compaction of dsDNA by the HIV-1 nucleocapsid and Gag proteins visualized using nanofluidic channels

scientific article published on 01 January 2019

Bacteriophage strain typing by rapid single molecule analysis.

scientific article

Base Pair Sensitivity and Enhanced ON/OFF Ratios of DNA-Binding: Donor–Acceptor–Donor Fluorophores

scientific article published on 30 September 2013

Binding geometry and photophysical properties of DNA-threading binuclear ruthenium complexes

scientific article published in January 2007

Binding of Thioflavin-T to Amyloid Fibrils Leads to Fluorescence Self-Quenching and Fibril Compaction.

scientific article published on 12 April 2017

Click and Cut: a click chemistry approach to developing oxidative DNA damaging agents

scientific article published on 01 October 2021

Columnar self-assembly and alignment of planar carbenium ions in Langmuir-Blodgett films.

scientific article published on 14 December 2010

Comparing mono- and divalent DNA groove binding cyanine dyes -- binding geometries, dissociation rates, and fluorescence properties

scientific article published on 24 March 2006

Competitive binding-based optical DNA mapping for fast identification of bacteria--multi-ligand transfer matrix theory and experimental applications on Escherichia coli

scientific article

Complex DNA binding kinetics resolved by combined circular dichroism and luminescence analysis

scientific article published on 2 May 2008

DNA compaction by the bacteriophage protein Cox studied on the single DNA molecule level using nanofluidic channels

scientific article

DNA intercalation optimized by two-step molecular lock mechanism

scientific article

DNA polymorphism as an origin of adenine-thymine tract length-dependent threading intercalation rate

scientific article

DNA strand exchange catalyzed by molecular crowding in PEG solutions

scientific article published on 29 September 2010

DNA-binding of semirigid binuclear ruthenium complex delta,delta-[mu-(11,11'-bidppz)(phen)(4)ru(2)](4+): extremely slow intercalation kinetics

scientific article published in October 2002

Direct identification of antibiotic resistance genes on single plasmid molecules using CRISPR/Cas9 in combination with optical DNA mapping.

scientific article published on December 2016

Direct probing of ion pair formation using a symmetric triangulenium dye

scientific article published on 02 November 2011

Dissecting the Dynamic Pathways of Stereoselective DNA Threading Intercalation

scientific article

Enantioselective luminescence quenching of DNA light-switch [Ru(phen)2dppz]2+ by electron transfer to structural homologue [Ru(phendione)2dppz]2+

scientific article published on 01 September 2005

Enhanced DNA strand exchange on positively charged liposomes

Enzyme-free optical DNA mapping of the human genome using competitive binding

scientific article published on 01 September 2019

Evidence for hydrophobic catalysis of DNA strand exchange

scientific article published on 01 April 2015

Exploring DNA-protein interactions on the single DNA molecule level using nanofluidic tools

scientific article

Extension of nanoconfined DNA: Quantitative comparison between experiment and theory ⬇️

scientific article published on 2 December 2015

Fast size-determination of intact bacterial plasmids using nanofluidic channels

scientific article published on 21 May 2015

Fluorescence Microscopy of Nanochannel-Confined DNA ⬇️

scientific article published on January 1, 2011

Fluorescence enhancement of single DNA molecules confined in Si/SiO2 nanochannels

scientific article published on 14 June 2010

Heterogeneous staining: a tool for studies of how fluorescent dyes affect the physical properties of DNA.

scientific article published on 23 August 2013

Hydride formation thermodynamics and hysteresis in individual Pd nanocrystals with different size and shape.

scientific article published on 7 September 2015

Identification of pathogenic bacteria in complex samples using a smartphone based fluorescence microscope

scholarly article in RSC Advances, vol. 8 no. 64, 2018

Interactions between a luminescent conjugated polyelectrolyte and amyloid fibrils investigated with flow linear dichroism spectroscopy

scientific article published on 2 April 2011

Kinetic characterization of an extremely slow DNA binding equilibrium

scientific article published on 3 July 2007

Kinetic recognition of AT-rich DNA by ruthenium complexes

scientific article published in January 2007

Large area, soft crystalline thin films of N,N′,N′′-trialkyltriazatriangulenium salts with homeotropic alignment of the discotic cores in a lamellar lattice

Lipid vesicle composition influences the incorporation and fluorescence properties of the lipophilic sulphonated carbocyanine dye SP-DiO

scientific article published on 14 April 2020

Lipid-based passivation in nanofluidics

scientific article

Local conformation of confined DNA studied using emission polarization anisotropy

scientific article

MEG3 long noncoding RNA regulates the TGF-β pathway genes through formation of RNA-DNA triplex structures.

scientific article published on 24 July 2015

Mechanically manipulating the DNA threading intercalation rate

scientific article published in March 2008

Mechanism of DNA strand exchange at liposome surfaces investigated using mismatched DNA

scientific article published on 01 February 2009

Micelle-sequestered dissociation of cationic DNA-intercalated drugs: unexpected surfactant-induced rate enhancement

scientific article published in April 2003

Monitoring the DNA binding kinetics of a binuclear ruthenium complex by energy transfer: evidence for slow shuffling

scientific article published on 01 November 2005

Nanoconfined Circular and Linear DNA: Equilibrium Conformations and Unfolding Kinetics

Optical DNA Mapping Combined with Cas9-Targeted Resistance Gene Identification for Rapid Tracking of Resistance Plasmids in a Neonatal Intensive Care Unit Outbreak

scientific article published on 09 July 2019

Optical DNA mapping in nanofluidic devices: principles and applications.

scientific article

Orientational correlations in confined DNA.

scientific article published on 11 October 2012

Phosphorylated CtIP bridges DNA to promote annealing of broken ends

scientific article published on 19 August 2020

Polyclonal spread of blaCTX-M-15 through high-risk clones of Escherichia coli at a tertiary hospital in Ethiopia

scientific article published in 2022

Polymer-templated self-assembly of a 2-dimensional gold nanoparticle network

scientific article published on 04 March 2008

PrgB Promotes Aggregation, Biofilm Formation, and Conjugation through DNA Binding and Compaction.

scientific article published on 3 May 2018

Probing physical properties of a DNA-protein complex using nanofluidic channels

scientific article

Rapid Tracing of Resistance Plasmids in a Nosocomial Outbreak Using Optical DNA Mapping

scientific article published on 29 March 2016

Rapid identification of intact bacterial resistance plasmids via optical mapping of single DNA molecules

scientific article published on 27 July 2016

Reshaping the Energy Landscape Transforms the Mechanism and Binding Kinetics of DNA Threading Intercalation

scientific article

Self-Assembly and Near Perfect Macroscopic Alignment of Fluorescent Triangulenium Salt in Spin-Cast Thin Films on PTFE ⬇️

scientific article published on May 17, 2013

Self-assembled nanogaps via seed-mediated growth of end-to-end linked gold nanorods

scientific article published on 01 April 2009

Sensing conformational changes in DNA upon ligand binding using QCM-D. Polyamine condensation and Rad51 extension of DNA layers

scientific article published on 08 October 2014

Single Particle Nanoplasmonic Sensing in Individual Nanofluidic Channels.

scientific article

Single-molecule electronics: from chemical design to functional devices.

scientific article published on 07 August 2014

Solution-based fabrication of single-crystalline arrays of organic nanowires.

scientific article published on January 2010

Steady-state and time-resolved Thioflavin-T fluorescence can report on morphological differences in amyloid fibrils formed by Aβ(1-40) and Aβ(1-42).

scientific article published on 7 February 2015

Strong DNA deformation required for extremely slow DNA threading intercalation by a binuclear ruthenium complex

scientific article

Super-Resolution Genome Mapping in Silicon Nanochannels

scientific article published on 19 September 2016

The conquest of middle-earth: combining top-down and bottom-up nanofabrication for constructing nanoparticle based devices

scientific article published on 11 September 2014

Trihydroxytrioxatriangulene--an extended fluorescein and a ratiometric pH sensor

scientific article published in March 2010

Turn-on, fluorescent nuclear stains with live cell compatibility

scientific article

Visualizing the Nonhomogeneous Structure of RAD51 Filaments Using Nanofluidic Channels.

scientific article published in August 2016

Vitamin C Pretreatment Enhances the Antibacterial Effect of Cold Atmospheric Plasma.

scientific article published on 22 February 2017

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