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List of works by Vivek Mutalik

A Phage Foundry Framework to Systematically Develop Viral Countermeasures to Combat Antibiotic-Resistant Bacterial Pathogens

scientific article published in 2022

A steady state analysis indicates that negative feedback regulation of PTP1B by Akt elicits bistability in insulin-stimulated GLUT4 translocation

scientific article

A theoretical steady state analysis indicates that induction of Escherichia coli glnALG operon can display all-or-none behavior

scientific article published on 23 June 2006

Allosteric interactions and bifunctionality make the response of glutamine synthetase cascade system of Escherichia coli robust and ultrasensitive.

scientific article published on 3 April 2003

An adaptor from translational to transcriptional control enables predictable assembly of complex regulation

scientific article published on 30 September 2012

Composability of regulatory sequences controlling transcription and translation in Escherichia coli

scientific article

Dual-barcoded shotgun expression library sequencing for high-throughput characterization of functional traits in bacteria

scientific article published in Nature Communications

Effect of the MAPK cascade structure, nuclear translocation and regulation of transcription factors on gene expression

scientific article published on 17 February 2006

Engineering naturally occurring trans-acting non-coding RNAs to sense molecular signals

scientific article

Equilibrium analysis of allosteric interactions shows zero-order effects.

scientific article published in January 2004

Genome-Wide Tuning of Protein Expression Levels to Rapidly Engineer Microbial Traits

scientific article published on 19 October 2015

High-throughput mapping of the phage resistance landscape in E. coli

scientific article published on 13 October 2020

Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNA

scholarly article

Investigation of Proposed Ladderane Biosynthetic Genes from Anammox Bacteria by Heterologous Expression in E. coli

scientific article

Measurement and modeling of intrinsic transcription terminators

scientific article published on 19 March 2013

PR-PR: cross-platform laboratory automation system

scientific article published on 14 January 2014

Precise and reliable gene expression via standard transcription and translation initiation elements

scientific article published on 10 March 2013

Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, sigmaE.

scientific article

Predicting the strength of UP-elements and full-length E. coli σE promoters

scientific article published on 8 December 2011

Promoter strength properties of the complete sigma E regulon of Escherichia coli and Salmonella enterica

scientific article published on 25 September 2009

Quantification of the glycogen cascade system: the ultrasensitive responses of liver glycogen synthase and muscle phosphorylase are due to distinctive regulatory designs

scientific article

Quantitative estimation of activity and quality for collections of functional genetic elements

scientific article

Rapid and Efficient One-Step Metabolic Pathway Integration in E. coli.

scientific article

Rationally designed families of orthogonal RNA regulators of translation

scientific article published on 25 March 2012

Robust global sensitivity in multiple enzyme cascade system explains how the downstream cascade structure may remain unaffected by cross-talk

scientific article published in January 2004

Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins

scientific article published on 01 March 2021

Toward rational design of bacterial genomes

scientific article

Tuning promoter strengths for improved synthesis and function of electron conduits in Escherichia coli.

scientific article

Versatile RNA-sensing transcriptional regulators for engineering genetic networks

scientific article

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