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List of works by Amelie Stein

3did Update: domain-domain and peptide-mediated interactions of known 3D structure

scientific article published on 25 October 2008

3did: a catalog of domain-based interactions of known three-dimensional structure

scientific article

3did: identification and classification of domain-based interactions of known three-dimensional structure ⬇️

scientific article published on October 21, 2010

3did: interacting protein domains of known three-dimensional structure

scientific article

<scp>MutationExplorer</scp>: a webserver for mutation of proteins and 3D visualization of energetic impacts

scientific article published in 2024

A Systematic Study of the Energetics Involved in Structural Changes upon Association and Connectivity in Protein Interaction Networks

A molecular interpretation of genetic interactions in yeast

scientific article published on 20 February 2008

A structural biology community assessment of AlphaFold 2 applications

A structural biology community assessment of AlphaFold2 applications

scientific article published in 2022

Approved drug mimics of short peptide ligands from protein interaction motifs

scientific article

Biophysical and Mechanistic Models for Disease-Causing Protein Variants

scientific article published on 31 January 2019

Blocking protein quality control to counter hereditary cancers

scientific article published on 4 August 2017

Co-Chaperones in Targeting and Delivery of Misfolded Proteins to the 26S Proteasome

scientific article published on 04 August 2020

Combined covalent-electrostatic model of hydrogen bonding improves structure prediction with Rosetta

scientific article (publication date: 10 February 2015)

Computational and cellular studies reveal structural destabilization and degradation of MLH1 variants in Lynch syndrome

scientific article published on 07 November 2019

Contextual specificity in peptide-mediated protein interactions

scientific article

Control of protein signaling using a computationally designed GTPase/GEF orthogonal pair

scientific article

Deep mutational scanning by FACS-sorting of encapsulated E. coli micro-colonies

scholarly article published 2 March 2018

Dynamic interactions of proteins in complex networks: a more structured view.

scientific article published on 27 August 2009

Ensuring scientific reproducibility in bio-macromolecular modeling via extensive, automated benchmarks

scientific article published on 29 November 2021

Folliculin variants linked to Birt-Hogg-Dubé syndrome are targeted for proteasomal degradation

scientific article published on 02 November 2020

Improvements to Robotics-Inspired Conformational Sampling in Rosetta ⬇️

scientific article (publication date: 2013)

Macromolecular modeling and design in Rosetta: recent methods and frameworks

scientific article published on 01 June 2020

Mapping the degradation pathway of a disease-linked aspartoacylase variant

scientific article published on 29 April 2021

Novel HARS2 missense variants identified in individuals with sensorineural hearing impairment and Perrault syndrome

scientific article published on 23 August 2019

Novel peptide-mediated interactions derived from high-resolution 3-dimensional structures

scientific article

Predicting the impact of Lynch syndrome-causing missense mutations from structural calculations

scientific article

Random Mutagenesis Analysis of the Influenza A M2 Proton Channel Reveals Novel Resistance Mutants

scientific article published on 03 October 2018

Structure of the FoxM1 DNA-recognition domain bound to a promoter sequence

scientific article

Three-dimensional modeling of protein interactions and complexes is going ‘omics ⬇️

scientific article published on February 12, 2011

Toward mechanistic models for genotype-phenotype correlations in phenylketonuria using protein stability calculations

scientific article published on 25 January 2019

Uncovering new substrates for Aurora A kinase

scientific article published on 12 November 2010

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