List of works - Edward R. B. Moore

A multifaceted 'omics' approach for addressing the challenge of antimicrobial resistance

scientific article published on January 2015

A treatment plant receiving waste water from multiple bulk drug manufacturers is a reservoir for highly multi-drug resistant integron-bearing bacteria

scientific article (publication date: 2013)

Achromobacter animicus sp. nov., Achromobacter mucicolens sp. nov., Achromobacter pulmonis sp. nov. and Achromobacter spiritinus sp. nov., from human clinical samples

scientific article

Achromobacter marplatensis sp. nov., isolated from a pentachlorophenol-contaminated soil

scientific article

Acquired genetic mechanisms of a multiresistant bacterium isolated from a treatment plant receiving wastewater from antibiotic production.

scientific article published on 13 September 2013

Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium. ⬇️

scientific article

Analyses of black fungi by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS): species-level identification of clinical isolates of Exophiala dermatitidis

scientific article published on 4 December 2014

Approach to analyze interactions of microorganisms, hydrophobic substrates, and soil colloids leading to formation of composite biofilms, and to study initial events in microbiogeological processes

scientific article published on 01 January 2001

Bacterial community dynamics during in-situ bioremediation of petroleum waste sludge in landfarming sites.

scientific article published in March 2005

Beware of False "Type Strain" Genome Sequences

scientific article published on 30 May 2019

Bordetella bronchialis sp. nov., Bordetella flabilis sp. nov. and Bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as Verticia sediminum gen. nov., comb. nov.

scientific article

Characterization and identification of an iron-oxidizing, Leptospirillum-like bacterium, present in the high sulfate leaching solution of a commercial bioleaching plant

scientific article published in June 2003

Chryseobacterium oncorhynchi sp. nov., isolated from rainbow trout (Oncorhynchus mykiss).

scientific article

Chryseobacterium tructae sp. nov., isolated from rainbow trout (Oncorhynchus mykiss).

scientific article

Chryseobacterium viscerum sp. nov., isolated from diseased fish

scientific article

Classification of Achromobacter genogroups 2, 5, 7 and 14 as Achromobacter insuavis sp. nov., Achromobacter aegrifaciens sp. nov., Achromobacter anxifer sp. nov. and Achromobacter dolens sp. nov., respectively

scientific article

Comparative Genomics of Pathogenic Clavibacter michiganensis subsp. michiganensis Strains from Chile Reveals Potential Virulence Features for Tomato Plants

scientific article published on 29 October 2020

Competitive binding-based optical DNA mapping for fast identification of bacteria--multi-ligand transfer matrix theory and experimental applications on Escherichia coli

scientific article

Complete Genome Sequence of Hydrocarbon-Degrading Halotolerant Acinetobacter radioresistens DD78, Isolated from the Aconcagua River Mouth in Central Chile

scientific article published on 15 August 2019

Complete Genome Sequence of Pseudomonas balearica DSM 6083T

scientific article

Complete Genome Sequence of the Hydrocarbon-Degrading Strain Achromobacter sp. B7, Isolated during Petroleum Hydrocarbon Bioremediation in the Valparaiso Region, Chile

article

Complete Genome Sequence of the Marine Hydrocarbon Degrader Alcaligenes aquatilis QD168, Isolated from Crude Oil-Polluted Sediment of Quintero Bay, Central Chile

article

Complete Genome Sequence of the Mycobacterium immunogenum Type Strain CCUG 47286

scientific article

Corynebacterium genitalium sp. nov., nom. rev. and Corynebacterium pseudogenitalium sp. nov., nom. rev., two old species of the genus Corynebacterium described from clinical and environmental samples

scientific article published in 2023

Cupriavidus pampae sp. nov., a novel herbicide-degrading bacterium isolated from agricultural soil

scientific article

Description of Pelomonas aquatica sp. nov. and Pelomonas puraquae sp. nov., isolated from industrial and haemodialysis water

scientific article

Detection of "Xisco" gene for identification of Streptococcus pneumoniae isolates

scientific article published on 15 December 2017

Development of a rapid MALDI-TOF MS based epidemiological screening method using MRSA as a model organism

scientific article published on 18 September 2017

Differentiation of species of the Streptococcus bovis/equinus-complex by MALDI-TOF Mass Spectrometry in comparison to sodA sequence analyses

scientific article

Diversity and antibiotic resistance of Acinetobacter spp. in water from the source to the tap.

scientific article

Diversity and expression of nitrogenase genes (nifH) from ectomycorrhizas of Corsican pine (Pinus nigra).

scientific article published in December 2006

Diversity of predominant endophytic bacteria in European deciduous and coniferous trees

scientific article

Draft Genome Sequence of Extended-Spectrum-β-Lactamase-Producing Escherichia coli Strain CCUG 62462, Isolated from a Urine Sample

scientific article

Draft Genome Sequence of Moraxella catarrhalis Type Strain CCUG 353T

scientific article

Draft Genome Sequence of Streptococcus gordonii Type Strain CCUG 33482T

scientific article

Draft Genome Sequences of Six Strains of Streptococcus pneumoniae from Serotypes 5, 6A, 6B, 18C, 19A, and 23F.

scientific article published on 6 April 2017

Dysgonomonas hofstadii sp. nov., isolated from a human clinical source

scientific article

Evaluation of MLVA for epidemiological typing and outbreak detection of ESBL-producing Escherichia coli in Sweden

scientific article

Evaluation of matrix-assisted laser desorption ionization-time of flight whole cell profiles for assessing the cultivable diversity of aerobic and moderately halophilic prokaryotes thriving in solar saltern sediments.

scientific article

Flavobacterium oncorhynchi sp. nov., a new species isolated from rainbow trout (Oncorhynchus mykiss).

scientific article

Flavobacterium plurextorum sp. nov. Isolated from Farmed Rainbow Trout (Oncorhynchus mykiss)

scientific article (publication date: 2013)

Flavobacterium tructae sp. nov. and Flavobacterium piscis sp. nov., isolated from farmed rainbow trout (Oncorhynchus mykiss).

scientific article

Fontimonas thermophila gen. nov., sp. nov., a moderately thermophilic bacterium isolated from a freshwater hot spring, and proposal of Solimonadaceae fam. nov. to replace Sinobacteraceae Zhou et al. 2008.

scientific article

Genome Sequences of Two Naphthalene-Degrading Strains of Pseudomonas balearica, Isolated from Polluted Marine Sediment and from an Oil Refinery Site

scientific article published on 6 April 2017

Genomic and Proteomic Characterization of the Extended-Spectrum β-Lactamase (ESBL)-Producing Escherichia coli Strain CCUG 73778: A Virulent, Nosocomial Outbreak Strain

scientific article published on 13 June 2020

Genotypic and phenotypic applications for the differentiation and species-level identification of achromobacter for clinical diagnoses.

scientific article

High rate of Exophiala dermatitidis recovery in the airways of patients with cystic fibrosis is associated with pancreatic insufficiency

scientific article

Hoeflea anabaenae sp. nov., an epiphytic symbiont that attaches to the heterocysts of a strain of Anabaena.

scientific article

ICSP response to ‘Regulating access can restrict participation in reporting new species and taxa’

scientific article published in 2022

Identification and capsular serotype sequetyping of Streptococcus pneumoniae strains

scientific article published on 03 July 2019

Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440.

scientific article published in December 2004

Lachnoanaerobaculum gen. nov., a new genus in the Lachnospiraceae: characterization of Lachnoanaerobaculum umeaense gen. nov., sp. nov., isolated from the human small intestine, and Lachnoanaerobaculum orale sp. nov., isolated from saliva, and recla

scientific article

Legionella maioricensis sp. nov., a new species isolated from the hot water distribution systems of a hospital and a shopping center during routine sampling ⬇️

scientific article published on 18 January 2023

MALDI-TOF MS: A return to phenotyping in microbial identification?

scientific article published on 01 February 2011

Microbial systematics and taxonomy: relevance for a microbial commons

scientific article published on June 2010

Multilocus Sequence Analysis of Clinical "Candidatus Neoehrlichia mikurensis" Strains from Europe

scientific article

Mycobacterium iranicum sp. nov., a rapidly growing scotochromogenic species isolated from clinical specimens on three different continents

scientific article

Peptostreptococcus canis sp. nov., isolated from subgingival plaque from canine oral cavity

scientific article

Peptostreptococcus russellii sp. nov., isolated from a swine-manure storage pit.

scientific article

Phylogeny of Maricaulis Abraham et al. 1999 and proposal of Maricaulis virginensis sp. nov., M. parjimensis sp. nov., M. washingtonensis sp. nov. and M. salignorans sp. nov.

scientific article

Prevotella jejuni sp. nov., isolated from the small intestine of a child with coeliac disease

scientific article

Proteotyping: Proteomic characterization, classification and identification of microorganisms--A prospectus.

scientific article published on 11 April 2015

Reclassification of Achromobacter spiritinus Vandamme et al. 2013 as a later heterotypic synonym of Achromobacter marplatensis Gomila et al. 2011.

scientific article published on 5 January 2016

Resolving taxonomic confusion: establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae

scientific article published in 2022

Savagea faecisuis gen. nov., sp. nov., a tylosin- and tetracycline-resistant bacterium isolated from a swine-manure storage pit.

scientific article published on 17 May 2015

Shewanella septentrionalis sp. nov. and Shewanella holmiensis sp. nov., isolated from Baltic Sea water and sediments ⬇️

scientific article published on 21 April 2023

Shift of CTX-M genotypes has determined the increased prevalence of extended-spectrum β-lactamase-producing Escherichia coli in south-western Sweden ⬇️

scientific article published on November 27, 2012

Shinella fusca sp. nov., isolated from domestic waste compost

scientific article published on 31 July 2009

Sphingobium vermicomposti sp. nov., isolated from vermicompost

scientific article published on 30 July 2009

Stenotrophomonas interspecies differentiation and identification by gyrB sequence analysis

scientific article

Strain-Level Typing and Identification of Bacteria Using Mass Spectrometry-Based Proteomics

scientific article published on 11 April 2012

Sub-typing of extended-spectrum-β-lactamase-producing isolates from a nosocomial outbreak: application of a 10-loci generic Escherichia coli multi-locus variable number tandem repeat analysis.

scientific article

Taxonomic characterisation of ceftazidime-resistant Brevundimonas isolates and description of Brevundimonas faecalis sp. nov.

scientific article

Taxonomic dissection of Achromobacter denitrificans Coenye et al. 2003 and proposal of Achromobacter agilis sp. nov., nom. rev., Achromobacter pestifer sp. nov., nom. rev., Achromobacter kerstersii sp. nov. and Achromobacter deleyi sp. nov.

scientific article

Two novel species Enterococcus lemanii sp. nov. and Enterococcus eurekensis sp. nov., isolated from a swine-manure storage pit.

scientific article

Typing and Characterization of Bacteria Using Bottom-up Tandem Mass Spectrometry Proteomics.

scientific article published on 18 April 2017

Uncommonly isolated clinical Pseudomonas: identification and phylogenetic assignation.

scientific article

List of works by Edward R. B. Moore

A multifaceted 'omics' approach for addressing the challenge of antimicrobial resistance

A treatment plant receiving waste water from multiple bulk drug manufacturers is a reservoir for highly multi-drug resistant integron-bearing bacteria

Achromobacter animicus sp. nov., Achromobacter mucicolens sp. nov., Achromobacter pulmonis sp. nov. and Achromobacter spiritinus sp. nov., from human clinical samples

Achromobacter marplatensis sp. nov., isolated from a pentachlorophenol-contaminated soil

Acquired genetic mechanisms of a multiresistant bacterium isolated from a treatment plant receiving wastewater from antibiotic production.

Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium. ⬇️

Analyses of black fungi by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS): species-level identification of clinical isolates of Exophiala dermatitidis

Approach to analyze interactions of microorganisms, hydrophobic substrates, and soil colloids leading to formation of composite biofilms, and to study initial events in microbiogeological processes

Bacterial community dynamics during in-situ bioremediation of petroleum waste sludge in landfarming sites.

Beware of False "Type Strain" Genome Sequences

Bordetella bronchialis sp. nov., Bordetella flabilis sp. nov. and Bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as Verticia sediminum gen. nov., comb. nov.

Characterization and identification of an iron-oxidizing, Leptospirillum-like bacterium, present in the high sulfate leaching solution of a commercial bioleaching plant

Chryseobacterium oncorhynchi sp. nov., isolated from rainbow trout (Oncorhynchus mykiss).

Chryseobacterium tructae sp. nov., isolated from rainbow trout (Oncorhynchus mykiss).

Chryseobacterium viscerum sp. nov., isolated from diseased fish

Classification of Achromobacter genogroups 2, 5, 7 and 14 as Achromobacter insuavis sp. nov., Achromobacter aegrifaciens sp. nov., Achromobacter anxifer sp. nov. and Achromobacter dolens sp. nov., respectively

Comparative Genomics of Pathogenic Clavibacter michiganensis subsp. michiganensis Strains from Chile Reveals Potential Virulence Features for Tomato Plants

Competitive binding-based optical DNA mapping for fast identification of bacteria--multi-ligand transfer matrix theory and experimental applications on Escherichia coli

Complete Genome Sequence of Hydrocarbon-Degrading Halotolerant Acinetobacter radioresistens DD78, Isolated from the Aconcagua River Mouth in Central Chile

Complete Genome Sequence of Pseudomonas balearica DSM 6083T

Complete Genome Sequence of the Hydrocarbon-Degrading Strain Achromobacter sp. B7, Isolated during Petroleum Hydrocarbon Bioremediation in the Valparaiso Region, Chile

Complete Genome Sequence of the Marine Hydrocarbon Degrader Alcaligenes aquatilis QD168, Isolated from Crude Oil-Polluted Sediment of Quintero Bay, Central Chile

Complete Genome Sequence of the Mycobacterium immunogenum Type Strain CCUG 47286

Corynebacterium genitalium sp. nov., nom. rev. and Corynebacterium pseudogenitalium sp. nov., nom. rev., two old species of the genus Corynebacterium described from clinical and environmental samples

Cupriavidus pampae sp. nov., a novel herbicide-degrading bacterium isolated from agricultural soil

Description of Pelomonas aquatica sp. nov. and Pelomonas puraquae sp. nov., isolated from industrial and haemodialysis water

Detection of "Xisco" gene for identification of Streptococcus pneumoniae isolates

Development of a rapid MALDI-TOF MS based epidemiological screening method using MRSA as a model organism

Differentiation of species of the Streptococcus bovis/equinus-complex by MALDI-TOF Mass Spectrometry in comparison to sodA sequence analyses

Diversity and antibiotic resistance of Acinetobacter spp. in water from the source to the tap.

Diversity and expression of nitrogenase genes (nifH) from ectomycorrhizas of Corsican pine (Pinus nigra).

Diversity of predominant endophytic bacteria in European deciduous and coniferous trees

Draft Genome Sequence of Extended-Spectrum-β-Lactamase-Producing Escherichia coli Strain CCUG 62462, Isolated from a Urine Sample

Draft Genome Sequence of Moraxella catarrhalis Type Strain CCUG 353T

Draft Genome Sequence of Streptococcus gordonii Type Strain CCUG 33482T

Draft Genome Sequences of Six Strains of Streptococcus pneumoniae from Serotypes 5, 6A, 6B, 18C, 19A, and 23F.

Dysgonomonas hofstadii sp. nov., isolated from a human clinical source

Evaluation of MLVA for epidemiological typing and outbreak detection of ESBL-producing Escherichia coli in Sweden

Evaluation of matrix-assisted laser desorption ionization-time of flight whole cell profiles for assessing the cultivable diversity of aerobic and moderately halophilic prokaryotes thriving in solar saltern sediments.

Flavobacterium oncorhynchi sp. nov., a new species isolated from rainbow trout (Oncorhynchus mykiss).

Flavobacterium plurextorum sp. nov. Isolated from Farmed Rainbow Trout (Oncorhynchus mykiss)

Flavobacterium tructae sp. nov. and Flavobacterium piscis sp. nov., isolated from farmed rainbow trout (Oncorhynchus mykiss).

Fontimonas thermophila gen. nov., sp. nov., a moderately thermophilic bacterium isolated from a freshwater hot spring, and proposal of Solimonadaceae fam. nov. to replace Sinobacteraceae Zhou et al. 2008.

Genome Sequences of Two Naphthalene-Degrading Strains of Pseudomonas balearica, Isolated from Polluted Marine Sediment and from an Oil Refinery Site

Genomic and Proteomic Characterization of the Extended-Spectrum β-Lactamase (ESBL)-Producing Escherichia coli Strain CCUG 73778: A Virulent, Nosocomial Outbreak Strain

Genotypic and phenotypic applications for the differentiation and species-level identification of achromobacter for clinical diagnoses.

High rate of Exophiala dermatitidis recovery in the airways of patients with cystic fibrosis is associated with pancreatic insufficiency

Hoeflea anabaenae sp. nov., an epiphytic symbiont that attaches to the heterocysts of a strain of Anabaena.

ICSP response to ‘Regulating access can restrict participation in reporting new species and taxa’

Identification and capsular serotype sequetyping of Streptococcus pneumoniae strains

Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440.

Lachnoanaerobaculum gen. nov., a new genus in the Lachnospiraceae: characterization of Lachnoanaerobaculum umeaense gen. nov., sp. nov., isolated from the human small intestine, and Lachnoanaerobaculum orale sp. nov., isolated from saliva, and recla

Legionella maioricensis sp. nov., a new species isolated from the hot water distribution systems of a hospital and a shopping center during routine sampling ⬇️

MALDI-TOF MS: A return to phenotyping in microbial identification?

Microbial systematics and taxonomy: relevance for a microbial commons

Multilocus Sequence Analysis of Clinical "Candidatus Neoehrlichia mikurensis" Strains from Europe

Mycobacterium iranicum sp. nov., a rapidly growing scotochromogenic species isolated from clinical specimens on three different continents

Peptostreptococcus canis sp. nov., isolated from subgingival plaque from canine oral cavity

Peptostreptococcus russellii sp. nov., isolated from a swine-manure storage pit.

Phylogeny of Maricaulis Abraham et al. 1999 and proposal of Maricaulis virginensis sp. nov., M. parjimensis sp. nov., M. washingtonensis sp. nov. and M. salignorans sp. nov.

Prevotella jejuni sp. nov., isolated from the small intestine of a child with coeliac disease

Proteotyping: Proteomic characterization, classification and identification of microorganisms--A prospectus.

Reclassification of Achromobacter spiritinus Vandamme et al. 2013 as a later heterotypic synonym of Achromobacter marplatensis Gomila et al. 2011.

Resolving taxonomic confusion: establishing the genus Phytobacter on the list of clinically relevant Enterobacteriaceae

Savagea faecisuis gen. nov., sp. nov., a tylosin- and tetracycline-resistant bacterium isolated from a swine-manure storage pit.

Shewanella septentrionalis sp. nov. and Shewanella holmiensis sp. nov., isolated from Baltic Sea water and sediments ⬇️

Shift of CTX-M genotypes has determined the increased prevalence of extended-spectrum β-lactamase-producing Escherichia coli in south-western Sweden ⬇️

Shinella fusca sp. nov., isolated from domestic waste compost

Sphingobium vermicomposti sp. nov., isolated from vermicompost

Stenotrophomonas interspecies differentiation and identification by gyrB sequence analysis

Strain-Level Typing and Identification of Bacteria Using Mass Spectrometry-Based Proteomics

Sub-typing of extended-spectrum-β-lactamase-producing isolates from a nosocomial outbreak: application of a 10-loci generic Escherichia coli multi-locus variable number tandem repeat analysis.

Taxonomic characterisation of ceftazidime-resistant Brevundimonas isolates and description of Brevundimonas faecalis sp. nov.

Taxonomic dissection of Achromobacter denitrificans Coenye et al. 2003 and proposal of Achromobacter agilis sp. nov., nom. rev., Achromobacter pestifer sp. nov., nom. rev., Achromobacter kerstersii sp. nov. and Achromobacter deleyi sp. nov.

Two novel species Enterococcus lemanii sp. nov. and Enterococcus eurekensis sp. nov., isolated from a swine-manure storage pit.

Typing and Characterization of Bacteria Using Bottom-up Tandem Mass Spectrometry Proteomics.

Uncommonly isolated clinical Pseudomonas: identification and phylogenetic assignation.