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List of works by Tomas Perez-Acle

A novel adrenocorticotropin receptor mutation alters its structure and function, causing familial glucocorticoid deficiency.

scientific article published on 20 May 2008

Accessing gap-junction channel structure-function relationships through molecular modeling and simulations

scientific article

An eleven amino acid residue deletion expands the substrate specificity of acetyl xylan esterase II (AXE II) from Penicillium purpurogenum.

scientific article published in December 2007

Brief Comparison between Experimental and Computationally Generated Ensembles of RNA Dinucleotides

scientific article published on 10 January 2020

Calpain inhibitors prevent p38 MAPK activation and germ cell apoptosis after heat stress in pubertal rat testes

scientific article published on 01 November 2009

Changes in Olfactory Receptor Expression Are Correlated With Odor Exposure During Early Development in the zebrafish (Danio rerio).

scientific article published on 17 February 2016

Characterization of a novel water pocket inside the human Cx26 hemichannel structure

scientific article

Computational modeling study of functional microdomains in cannabinoid receptor type 1.

scientific article published on 26 February 2008

Critical role of the first transmembrane domain of Cx26 in regulating oligomerization and function

scientific article

Docking and quantitative structure-activity relationship studies for the bisphenylbenzimidazole family of non-nucleoside inhibitors of HIV-1 reverse transcriptase

scientific article

Exploring the Membrane Potential of Simple Dual-Membrane Systems as Models for Gap-Junction Channels.

scientific article published on June 2016

Exploring the membrane potential of a simple dual membrane system by using a constant electric field.

scientific article

From dimers to collective dipoles: Structure and dynamics of methanol/ethanol partition by narrow carbon nanotubes.

scientific article published in February 2016

Graphlet Based Metrics for the Comparison of Gene Regulatory Networks

scientific article

Hantavirus Gc glycoprotein: evidence for a class II fusion protein.

scientific article published in November 2005

Identification of NPR1-dependent and independent genes early induced by salicylic acid treatment in Arabidopsis.

scientific article published in December 2005

Insights on the structure and stability of Licanantase: a trimeric acid-stable coiled-coil lipoprotein from Acidithiobacillus thiooxidans.

scientific article

Keratitis-ichthyosis-deafness syndrome-associated Cx26 mutants produce nonfunctional gap junctions but hyperactive hemichannels when co-expressed with wild type Cx43.

scientific article

Life-giving caspases: revealing new roles during mouse embryo preimplantation development

scientific article published in January 2010

LoTo: a graphlet based method for the comparison of local topology between gene regulatory networks.

scientific article published on 28 February 2017

Molecular Dynamics Simulations of Cx26-Wt and Deafness Related Mutants M34A, A40G and V37I

article

Molecular basis of ligand dissociation in β-adrenergic receptors

scientific article

Molecular dynamics study of the archaeal aquaporin AqpM

scientific article (publication date: 22 December 2011)

Molecular modeling of Trypanosoma cruzi glutamate cysteine ligase and investigation of its interactions with glutathione

scientific article published on 06 September 2011

Myricetin, quercetin and catechin-gallate inhibit glucose uptake in isolated rat adipocytes.

scientific article published on March 2005

Nanoinformatics: an emerging area of information technology at the intersection of bioinformatics, computational chemistry and nanobiotechnology ⬇️

scientific article published on May 11, 2011

On Biophysical Properties and Sensitivity to Gap Junction Blockers of Connexin 39 Hemichannels Expressed in HeLa Cells

scientific article published on 9 February 2017

On the thermodynamics of carbon nanotube single-file water loading: free energy, energy and entropy calculations

scientific article

Orientational and Folding Thermodynamics via Electric Dipole Moment Restraining

scientific article published on 15 March 2019

RIP-MD: a tool to study residue interaction networks in protein molecular dynamics

scientific article published on 07 December 2018

Rule-Based Models and Applications in Biology

scientific article published on 01 January 2018

Stochastic simulation of multiscale complex systems with PISKaS: A rule-based approach.

scientific article published on 21 November 2017

Structure-function relationship between the tobamovirus TMV-Cg coat protein and the HR-like response

article

The nop gene from Phanerochaete chrysosporium encodes a peroxidase with novel structural features

scientific article published in July 2005

The syndromic deafness mutation G12R impairs fast and slow gating in Cx26 hemichannels.

scientific article published on 11 April 2018

Towards bio-silicon interfaces: formation of an ultra-thin self-hydrated artificial membrane composed of dipalmitoylphosphatidylcholine (DPPC) and chitosan deposited in high vacuum from the gas-phase

scientific article published on September 2014

Tryptophan Scanning Reveals Dense Packing of Connexin Transmembrane Domains in Gap Junction Channels Composed of Connexin32

scientific article published on 12 May 2015

Uniaxial Magnetic Anisotropy Energy of Fe Wires Embedded in Carbon Nanotubes

scientific article published on 01 May 2010

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