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List of works by Andrew J. Weightman

A comparison of stable-isotope probing of DNA and phospholipid fatty acids to study prokaryotic functional diversity in sulfate-reducing marine sediment enrichment slurries

scientific article published in September 2006

A review of prokaryotic populations and processes in sub-seafloor sediments, including biosphere:geosphere interactions

scientific article published in June 2014

Analysis of DGGE profiles to explore the relationship between prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin

scientific article published on 01 October 2006

Application of a recA gene-based identification approach to the maize rhizosphere reveals novel diversity in Burkholderia species

scientific article published in June 2006

Arabidopsis thaliana and Pisum sativum models demonstrate that root colonization is an intrinsic trait of Burkholderia cepacia complex bacteria.

scientific article published on 10 December 2013

Archaeal community diversity and abundance changes along a natural salinity gradient in estuarine sediments

scientific article published on 15 December 2014

Assessment of bacterial community structure in the deep sub-seafloor biosphere by 16S rDNA-based techniques: a cautionary tale.

scientific article published in October 2003

At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies

scientific article published in December 2005

Bacteria in decomposing wood and their interactions with wood-decay fungi

scientific article

Bacterial community structure, compartmentalization and activity in a microbial fuel cell.

scientific article

Bacterial populations and processes in sediments containing gas hydrates (ODP Leg 146: Cascadia Margin)

scholarly article

Biofilm microbial community of a thermophilic trickling biofilter used for continuous biohydrogen production.

scientific article published in August 2005

Biogeochemistry and biodiversity of methane cycling in subsurface marine sediments (Skagerrak, Denmark).

scientific article published in May 2007

Changes in Metal Leachability through Stimulation of Iron Reducing Communities within Waste Sludge

scientific article published in August 2017

Changes in Metal Leachability through Stimulation of Iron Reducing Communities within Waste Sludge

Chemosynthetic bacteria found in bivalve species from mud volcanoes of the Gulf of Cadiz

scientific article

Chronic effects of temperature and nitrate pollution on Daphnia magna: Is this cladoceran suitable for widespread use as a tertiary treatment?

scientific article

Comparing the dehalogenase gene pool in cultivated alpha-halocarboxylic acid-degrading bacteria with the environmental metagene pool.

scientific article

Comparison of microbial and meiofaunal community analyses for determining impact of heavy metal contamination

scientific article

Complex coupled metabolic and prokaryotic community responses to increasing temperatures in anaerobic marine sediments: critical temperatures and substrate changes

scientific article

Composition of Acridid gut bacterial communities as revealed by 16S rRNA gene analysis

scientific article published on 21 September 2007

Contrasting relationships between biogeochemistry and prokaryotic diversity depth profiles along an estuarine sediment gradient

scientific article

Culturable prokaryotic diversity of deep, gas hydrate sediments: first use of a continuous high-pressure, anaerobic, enrichment and isolation system for subseafloor sediments (DeepIsoBUG)

scientific article

Culture-independent analysis of bacterial fuel contamination provides insight into the level of concordance with the standard industry practice of aerobic cultivation

scientific article (publication date: July 2011)

Culture-independent identification of periodontitis-associated Porphyromonas and Tannerella populations by targeted molecular analysis.

scientific article published on December 2004

DNA extraction for 16S rRNA gene analysis to determine genetic diversity in deep sediment communities

scientific article published on 01 December 1992

Deep sub-seafloor prokaryotes stimulated at interfaces over geological time

scientific article published in Nature

Development of a recA gene-based identification approach for the entire Burkholderia genus

scientific article published in July 2005

Dissimilatory Fe(III) reduction by an electrochemically active lactic acid bacterium phylogenetically related to Enterococcus gallinarum isolated from submerged soil

scientific article

Distribution and culturability of the uncultivated 'AGG58 cluster' of the Bacteroidetes phylum in aquatic environments

scientific article published in March 2004

Distribution of candidate division JS1 and other Bacteria in tidal sediments of the German Wadden Sea using targeted 16S rRNA gene PCR-DGGE.

scientific article

Diversity of alpha-halocarboxylic acid dehalogenases in bacteria isolated from a pristine soil after enrichment and selection on the herbicide 2,2-dichloropropionic acid (Dalapon).

scientific article published in January 2003

Diversity of gut microbiota increases with aging and starvation in the desert locust

scientific article

Diversity of oral asaccharolytic Eubacterium species in periodontitis--identification of novel phylotypes representing uncultivated taxa

scientific article published in February 1999

Diversity of prokaryotes and methanogenesis in deep subsurface sediments from the Nankai Trough, Ocean Drilling Program Leg 190.

scientific article

Dynamic Microbial Community Associated with Iron–Arsenic Co-Precipitation Products from a Groundwater Storage System in Bangladesh ⬇️

scientific article published on February 16, 2012

Enrichment and cultivation of prokaryotes associated with the sulphate-methane transition zone of diffusion-controlled sediments of Aarhus Bay, Denmark, under heterotrophic conditions.

scientific article

Environmentally directed mutations in the dehalogenase system of Pseudomonas putida strain PP3.

scientific article

Evaluation of five selective media for the detection of Pseudomonas aeruginosa using a strain panel from clinical, environmental and industrial sources

scientific article published on 25 January 2014

Fluviicola taffensis gen. nov., sp. nov., a novel freshwater bacterium of the family Cryomorphaceae in the phylum 'Bacteroidetes'.

scientific article

Genome Sequences of Two Choline-Utilizing Methanogenic Archaea, spp., Isolated from Marine Sediments

scientific article published on 02 May 2019

Haloalkane-utilizing Rhodococcus strains isolated from geographically distinct locations possess a highly conserved gene cluster encoding haloalkane catabolism

scientific article published on May 2000

Highly competitive fungi manipulate bacterial communities in decomposing beech wood (Fagus sylvatica)

scientific article published on 01 February 2019

Horizontal transfer of dehalogenase genes on IncP1beta plasmids during bacterial adaptation to degrade alpha-halocarboxylic acids

scientific article published in August 2003

Identification and discrimination of oral asaccharolytic Eubacterium spp. by pyrolysis mass spectrometry and artificial neural networks.

scientific article published on February 1996

Identifying the genetic basis of ecologically and biotechnologically useful functions of the bacterium Burkholderia vietnamiensis

scientific article published in April 2007

Impact of flow hydrodynamics and pipe material properties on biofilm development within drinking water systems

scientific article published on 29 May 2019

Interlaboratory quantification of Bacteria and Archaea in deeply buried sediments of the Baltic Sea (IODP Expedition 347).

scientific article published on 18 January 2017

Investigation of the methanogen population structure and activity in a brackish lake sediment.

scientific article published in July 2005

Microbial dehalogenation of trichloroacetic acid

scientific article published in September 1992

Microbial diversity in Frenulata (Siboglinidae, Polychaeta) species from mud volcanoes in the Gulf of Cadiz (NE Atlantic).

scientific article

Modified linker-PCR primers facilitate complete sequencing of DGGE DNA fragments

scientific article published on 26 August 2008

Molecular cloning and heterologous expression of a Klebsiella pneumoniae gene encoding alginate lyase

scientific article published on 01 January 1989

Molecular monitoring of culturable bacteria from deep-sea sediment of the Nankai Trough, Leg 190 Ocean Drilling Program

scientific article

Mycobacterium avium Subspecies paratuberculosis: Human Exposure through Environmental and Domestic Aerosols

scientific article

Mycobacterium avium subsp. paratuberculosis in the catchment area and water of the River Taff in South Wales, United Kingdom, and its potential relationship to clustering of Crohn's disease cases in the city of Cardiff ⬇️

scientific article published in April 2005

New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon

scientific article

New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras

scientific article published in September 2006

Not all Pseudomonas aeruginosa are equal: strains from industrial sources possess uniquely large multireplicon genomes

scientific article published on 06 June 2019

Phylogeny and physiology of candidate phylum 'Atribacteria' (OP9/JS1) inferred from cultivation-independent genomics

scientific article published on 19 June 2015

Presence of Mycobacterium avium Subspecies paratuberculosis Monitored Over Varying Temporal and Spatial Scales in River Catchments: Persistent Routes for Human Exposure

scientific article published on 15 May 2019

Prokaryotes stimulate mineral H2 formation for the deep biosphere and subsequent thermogenic activity

article

Prokaryotic Populations and Activities in an Interbedded Coal Deposit, Including a Previously Deeply Buried Section (1.6–2.3 km) Above ∼ 150 Ma Basement Rock

article

Prokaryotic biodiversity and activity in the deep subseafloor biosphere

scientific article

Prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin

scientific article published in October 2006

Prokaryotic functional diversity in different biogeochemical depth zones in tidal sediments of the Severn Estuary, UK, revealed by stable-isotope probing

scientific article published on 15 February 2010

Purification, crystallization and preliminary crystallographic analysis of DehI, a group I alpha-haloacid dehalogenase from Pseudomonas putida strain PP3

scientific article published on 7 June 2008

Rock-crushing derived hydrogen directly supports a methanogenic community: significance for the deep biosphere

scientific article published on 26 December 2018

Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works

scientific article published on 18 July 2023

Subsurface microbiology and biogeochemistry of a deep, cold-water carbonate mound from the Porcupine Seabight (IODP Expedition 307).

scientific article

Survival of Desulfotomaculum spores from estuarine sediments after serial autoclaving and high-temperature exposure

scientific article published on 17 March 2015

The crystal structure of DehI reveals a new alpha-haloacid dehalogenase fold and active-site mechanism

scientific article

The effect of anthropogenic arsenic contamination on the earthworm microbiome.

scientific article

The nucleotide sequence of a transposable haloalkanoic acid dehalogenase regulatory gene (dehRI) from Pseudomonas putida strain PP3 and its relationship with sigma 54-dependent activators.

scientific article published on September 1995

Transposition of DEH, a broad-host-range transposon flanked by ISPpu12, in Pseudomonas putida is associated with genomic rearrangements and dehalogenase gene silencing.

scientific article

Uncultured Microbial Phyla Suggest Mechanisms for Multi-Thousand-Year Subsistence in Baltic Sea Sediments

scientific article published on 16 April 2019

Widespread occurrence of a novel division of bacteria identified by 16S rRNA gene sequences originally found in deep marine sediments

scientific article published on September 2004

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