List of works by Soren Buus

A Single-Chain Fusion Molecule Consisting of Peptide, Major Histocompatibility Gene Complex Class I Heavy Chain and beta2-Microglobulin Can Fold Partially Correctly, but Binds Peptide Inefficiently

article

A community resource benchmarking predictions of peptide binding to MHC-I molecules

scientific article

A novel system for continuous protein refolding and on-line capture by expanded bed adsorption.

scientific article published in August 2005

A peptide-binding assay for the disease-associated HLA-DQ8 molecule

scientific article published in June 1998

A recombinant antibody with the antigen-specific, major histocompatibility complex-restricted specificity of T cells.

scientific article published on March 1996

A strategy for bacterial production of a soluble functional human neonatal Fc receptor

scientific article published on 10 December 2007

A systematic, unbiased mapping of CD8+ and CD4+ T cell epitopes in Yellow Fever vaccinees

scientific article published on 02 April 2020

Adaptive immune responses to booster vaccination against yellow fever virus are much reduced compared to those after primary vaccination

scientific article (publication date: 6 April 2017)

Addition of TAT protein transduction domain and GrpE to human p53 provides soluble fusion proteins that can be transduced into dendritic cells and elicit p53-specific T-cell responses in HLA-A*0201 transgenic mice

scientific article

An integrative approach to CTL epitope prediction: a combined algorithm integrating MHC class I binding, TAP transport efficiency, and proteasomal cleavage predictions.

scientific article published in August 2005

Antigen processing influences HIV-specific cytotoxic T lymphocyte immunodominance

scientific article

ArrayPitope: Automated Analysis of Amino Acid Substitutions for Peptide Microarray-Based Antibody Epitope Mapping

scientific article

Binding of Peptides from the N-Terminal Region of α-Gliadin to the Celiac Disease-Associated HLA-DQ2 Molecule Assessed in Biochemical and T Cell Assays

scientific article published on 01 June 1996

CD8+ T cells complement antibodies in protecting against yellow fever virus

scientific article

CD8+ TCR Bias and Immunodominance in HIV-1 Infection

scientific article published on 24 April 2015

CTL epitopes for influenza A including the H5N1 bird flu; genome-, pathogen-, and HLA-wide screening.

scientific article published on 29 December 2006

Capsid-like particles decorated with the SARS-CoV-2 receptor-binding domain elicit strong virus neutralization activity

scientific article published on 12 January 2021

Carbon anhydrase IX specific immune responses in patients with metastatic renal cell carcinoma potentially cured by interleukin-2 based immunotherapy.

scientific article

Characterization of Monocyte-Derived Dendritic Cells Maturated With IFN-alpha

scientific article published on 01 March 2006

Comparison of CTL reactivity in the spleen and draining lymph nodes after immunization with peptides pulsed on dendritic cells or mixed with Freund's incomplete adjuvant

scientific article published on 01 November 2003

Comparison of vaccine-induced effector CD8 T cell responses directed against self- and non-self-tumor antigens: implications for cancer immunotherapy

scientific article published on 9 September 2013

Conflicting selective forces affect T cell receptor contacts in an immunodominant human immunodeficiency virus epitope

scientific article

Conservation of HIV-1 T cell epitopes across time and clades: validation of immunogenic HLA-A2 epitopes selected for the GAIA HIV vaccine

scientific article

Crystal structures of two peptide–HLA-B*1501 complexes; structural characterization of the HLA-B62 supertype

scientific article published on 18 October 2006

Dataset size and composition impact the reliability of performance benchmarks for peptide-MHC binding predictions

scientific article

Definition of supertypes for HLA molecules using clustering of specificity matrices

scientific article published on 13 February 2004

Degree of predicted minor histocompatibility antigen mismatch correlates with poorer clinical outcomes in nonmyeloablative allogeneic hematopoietic cell transplantation

scientific article published on 28 March 2010

Dendritic cells engineered to express defined allo-HLA peptide complexes induce antigen-specific cytotoxic T cells efficiently killing tumour cells.

scientific article published on April 2009

Description and prediction of peptide-MHC binding: the 'human MHC project'.

scientific article

Designing bovine T cell vaccines via reverse immunology

scientific article published on 09 January 2012

Different binding motifs of the celiac disease-associated HLA molecules DQ2.5, DQ2.2, and DQ7.5 revealed by relative quantitative proteomics of endogenous peptide repertoires

scientific article

Differential Immunodominance Hierarchy of CD8+ T-Cell Responses in HLA-B*27:05- and -B*27:02-Mediated Control of HIV-1 Infection

scientific article published on 22 November 2017

Differential clade-specific HLA-B*3501 association with HIV-1 disease outcome is linked to immunogenicity of a single Gag epitope

scientific article published on 12 September 2012

Diversity of Francisella tularensis Schu4 antigens recognized by T lymphocytes after natural infections in humans: Identification of candidate epitopes for inclusion in a rationally designed tularemia vaccine

scientific article published on 22 January 2007

Drug hypersensitivity caused by alteration of the MHC-presented self-peptide repertoire

scientific article

Efficient assembly of recombinant major histocompatibility complex class I molecules with preformed disulfide bonds

article

Establishment of a quantitative ELISA capable of determining peptide - MHC class I interaction

scientific article published on 01 April 2002

Evaluation of a competitive enzyme-linked immunosorbent assay for measurements of soluble HLA-G protein

scientific article published on 2 May 2014

Ex vivo tetramer staining and cell surface phenotyping for early activation markers CD38 and HLA-DR to enumerate and characterize malaria antigen-specific CD8+ T-cells induced in human volunteers immunized with a Plasmodium falciparum adenovirus-vec

scientific article published on 29 October 2013

Extensive CD4 and CD8 T Cell Cross-Reactivity between Alphaherpesviruses

scientific article published on 25 January 2016

Footprints of antigen processing boost MHC class II natural ligand binding predictions

Footprints of antigen processing boost MHC class II natural ligand predictions

scholarly article by Carolina M Barra published in November 2018

Functional recombinant MHC class II molecules and high-throughput peptide-binding assays

scientific article published on 5 May 2009

Further progress on defining highly conserved immunogenic epitopes for a global HIV vaccine: HLA-A3-restricted GAIA vaccine epitopes

article

Genome-based in silico identification of new Mycobacterium tuberculosis antigens activating polyfunctional CD8+ T cells in human tuberculosis

scientific article published on 17 December 2010

HIV Controllers Exhibit Enhanced Frequencies of Major Histocompatibility Complex Class II Tetramer+ Gag-Specific CD4+ T Cells in Chronic Clade C HIV-1 Infection

scientific article published on 11 January 2017

HIV control through a single nucleotide on the HLA-B locus

scientific article published on 15 August 2012

HIV subtype influences HLA-B*07:02-associated HIV disease outcome

scientific article

HIV-1 adaptation to NK cell-mediated immune pressure.

scientific article published on 05 June 2017

HLA Class II Specificity Assessed by High-Density Peptide Microarray Interactions

scientific article published on 01 June 2020

HLA class I binding 9mer peptides from influenza A virus induce CD4 T cell responses

scientific article

HLA-A*01:03, HLA-A*24:02, HLA-B*08:01, HLA-B*27:05, HLA-B*35:01, HLA-B*44:02, and HLA-C*07:01 monochain transgenic/H-2 class I null mice: novel versatile preclinical models of human T cell responses.

scientific article

HLA-A*68:02-restricted Gag-specific cytotoxic T lymphocyte responses can drive selection pressure on HIV but are subdominant and ineffective

scientific article published on July 2013

HLA-A*7401-mediated control of HIV viremia is independent of its linkage disequilibrium with HLA-B*5703

scientific article published on 15 April 2011

HLA-B*14:02-Restricted Env-Specific CD8+ T-Cell Activity Has Highly Potent Antiviral Efficacy Associated with Immune Control of HIV Infection

scientific article published on 6 September 2017

HLA-B*57 Micropolymorphism shapes HLA allele-specific epitope immunogenicity, selection pressure, and HIV immune control

scientific article published on 16 November 2011

HLA-specific intracellular epitope processing shapes an immunodominance pattern for HLA-B*57 that is distinct from HLA-B*58:01

scientific article published on 17 July 2013

HLArestrictor--a tool for patient-specific predictions of HLA restriction elements and optimal epitopes within peptides

scientific article published on 16 November 2010

High-affinity human leucocyte antigen class I binding variola-derived peptides induce CD4+ T cell responses more than 30 years post-vaccinia virus vaccination.

scientific article published in March 2009

High-resolution mapping of linear antibody epitopes using ultrahigh-density peptide microarrays.

scientific article published on 13 September 2012

High-resolution structure of HLA-A*1101 in complex with SARS nucleocapsid peptide

scientific article published on 20 July 2005

Human leukocyte antigen (HLA) class I restricted epitope discovery in yellow fewer and dengue viruses: importance of HLA binding strength

scientific article

Humoral and cellular CMV responses in healthy donors; identification of a frequent population of CMV-specific, CD4+ T cells in seronegative donors

scientific article

Identification and design of p53-derived HLA-A2-binding peptides with increased CTL immunogenicity.

scientific article published on April 2001

Identification and mapping of linear antibody epitopes in human serum albumin using high-density Peptide arrays.

scientific article

Identification of CD8+ T cell epitopes in the West Nile virus polyprotein by reverse-immunology using NetCTL.

scientific article

Identification of MHC Class I H-2 Kb/Db-Restricted Immunogenic Peptides Derived from Retinal Proteins

scientific article published on 01 September 2006

Identification of MHC class II restricted T-cell-mediated reactivity against MHC class I binding Mycobacterium tuberculosis peptides

scientific article published on 7 February 2011

Identification of a new hTERT-derived HLA-A*0201 restricted, naturally processed CTL epitope.

scientific article published on 27 April 2007

Identification of a novel UTY-encoded minor histocompatibility antigen

scientific article published in August 2012

Identification of an HLA-A*0201 restricted Bcl2-derived epitope expressed on tumors.

scientific article published on 19 December 2006

Identification of conserved subdominant HIV Type 1 CD8(+) T Cell epitopes restricted within common HLA Supertypes for therapeutic HIV Type 1 vaccines

scientific article

Identification of differentially expressed proteins in spontaneous thymic lymphomas from knockout mice with deletion of p53.

scientific article published on 10 June 2008

Identification of immunogenic HLA-B7 "Achilles' heel" epitopes within highly conserved regions of HIV

scientific article published on 26 December 2007

Identification of peptides from foot-and-mouth disease virus structural proteins bound by class I swine leukocyte antigen (SLA) alleles, SLA-1*0401 and SLA-2*0401.

scientific article

Immune epitope database analysis resource (IEDB-AR).

scientific article published on 31 May 2008

Immunological self, nonself discrimination

scientific article published in February 1987

Improved Humoral and Cellular Immune Responses Against the gp120 V3 Loop of HIV-1 Following Genetic Immunization with a Chimeric DNA Vaccine Encoding the V3 Inserted into the Hepatitis B Surface Antigen

article

Improved methods for predicting peptide binding affinity to MHC class II molecules

scientific article published on 6 January 2018

Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach

scientific article published on 12 February 2004

In silico-accelerated identification of conserved and immunogenic variola/vaccinia T-cell epitopes.

scientific article published on 24 June 2009

Incomplete effector/memory differentiation of antigen-primed CD8+ T cells in gene gun DNA-vaccinated mice.

scientific article published in July 2003

Induction of cytotoxic T-cell responses by gene gun DNA vaccination with minigenes encoding influenza A virus HA and NP CTL-epitopes

scientific article published in November 1999

Induction of foot-and-mouth disease virus-specific cytotoxic T cell killing by vaccination

scientific article

Isolation and characterization of antigen-la complexes involved in T cell recognition

scientific article published on 01 December 1986

Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction

scientific article

Longer peptide can be accommodated in the MHC class I binding site by a protrusion mechanism

scientific article published on 01 November 2000

MHC class II epitope predictive algorithms.

scientific article

MHC-I-restricted epitopes conserved among variola and other related orthopoxviruses are recognized by T cells 30 years after vaccination

scientific article published on 12 September 2008

MHCcluster, a method for functional clustering of MHC molecules

scientific article published on 18 June 2013

Magnitude and Kinetics of CD8+ T Cell Activation during Hyperacute HIV Infection Impact Viral Set Point

scientific article published on 5 September 2015

Major TCR Repertoire Perturbation by Immunodominant HLA-B44:03-Restricted CMV-Specific T Cells

Major histocompatibility complex class I binding predictions as a tool in epitope discovery.

scientific article published on 26 May 2010

Minimal Information about MHC Multimers (MIAMM)

scientific article published on 18 January 2022

Modeling the interactions of a peptide-major histocompatibility class I ligand with its receptors. II. Cross-reaction between a monoclonal antibody and two alpha beta T cell receptors.

scientific article published on January 2000

Modified human beta 2-microglobulin (desLys(58)) displays decreased affinity for the heavy chain of MHC class I and induces nitric oxide production and apoptosis.

scientific article published in March 2009

NNAlign: a web-based prediction method allowing non-expert end-user discovery of sequence motifs in quantitative peptide data

scientific article (publication date: 2011)

Nef-specific CD8+ T cell responses contribute to HIV-1 immune control

scientific article

NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11

scientific article published on 7 May 2008

NetMHCIIpan-2.0 - Improved pan-specific HLA-DR predictions using a novel concurrent alignment and weight optimization training procedure.

scientific article

NetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ.

scientific article published on 31 July 2013

NetMHCpan, a method for MHC class I binding prediction beyond humans

scientific article published on 12 November 2008

NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence

scientific article

NetMHCstab - predicting stability of peptide-MHC-I complexes; impacts for cytotoxic T lymphocyte epitope discovery.

scientific article published in January 2014

One-pot, mix-and-read peptide-MHC tetramers

scientific article

Optimization and immune recognition of multiple novel conserved HLA-A2, human immunodeficiency virus type 1-specific CTL epitopes

scientific article published in September 2003

Oriented coupling of major histocompatibility complex (MHC) to sensor surfaces using light assisted immobilisation technology

scientific article published in September 2005

Oxidative stress can alter the antigenicity of immunodominant peptides

scientific article published on 2 October 2009

P16-23. Antigen processing influences HIV-specific cytotoxic T lymphocyte immunodominance

article

Peptide binding to HLA class I molecules: homogenous, high-throughput screening, and affinity assays.

scientific article published on 4 February 2009

Peptide pool immunization and CD8+ T cell reactivity

scientific article published on 13 March 2013

Peptide specific expansion of CD8+ T cells by recombinant plate bound MHC/peptide complexes

scientific article published on 23 October 2008

Peptide-loaded dendritic cells prime and activate MHC-class I-restricted T cells more efficiently than protein-loaded cross-presenting DC.

scientific article

Phenotypic and functional characterization of clinical grade dendritic cells generated from patients with advanced breast cancer for therapeutic vaccination

scientific article

Porcine major histocompatibility complex (MHC) class I molecules and analysis of their peptide-binding specificities

scientific article

Predicting binding affinities of protein ligands from three-dimensional models: application to peptide binding to class I major histocompatibility proteins.

scientific article published in November 1999

Preformed purified peptide/major histocompatibility class I complexes are potent stimulators of class I-restricted T cell hybridomas

scientific article published on 01 June 1994

Programmed death-1 expression on HIV-1-specific CD8+ T cells is shaped by epitope specificity, T-cell receptor clonotype usage and antigen load

scientific article

Purification of correctly oxidized MHC class I heavy-chain molecules under denaturing conditions: a novel strategy exploiting disulfide assisted protein folding.

scientific article published on March 2003

Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan

scientific article

Real-time, high-throughput measurements of peptide-MHC-I dissociation using a scintillation proximity assay ⬇️

scientific article published on October 31, 2010

Receptor-ligand interactions measured by an improved spun column chromatography technique. A high efficiency and high throughput size separation method

scientific article published in April 1995

Recombinant chymosin used for exact and complete removal of a prochymosin derived fusion tag releasing intact native target protein.

scientific article published on May 2009

Reliable prediction of T-cell epitopes using neural networks with novel sequence representations

scientific article

SARS CTL vaccine candidates; HLA supertype-, genome-wide scanning and biochemical validation

scientific article

Saporin-conjugated tetramers identify efficacious anti-HIV CD8+ T-cell specificities

scientific article published on 11 October 2017

Selecting informative data for developing peptide-MHC binding predictors using a query by committee approach.

scientific article

Self-Peptides with Intermediate Capacity to Bind and Stabilize MHC Class I Molecules may be Immunogenic

scientific article published on 01 January 2003

Sensitive quantitative predictions of peptide-MHC binding by a 'Query by Committee' artificial neural network approach.

scientific article

Soluble human leukocyte antigen-G in seminal plasma is associated with HLA-G genotype: possible implications for fertility success

scientific article published on 16 April 2014

Strategies to work with HLA data in human populations for histocompatibility, clinical transplantation, epidemiology and population genetics: HLA-NET methodological recommendations

scientific article

Structural requirements for the interaction between class II MHC molecules and peptide antigens.

scientific article

Structure of HLA-A*1101 in complex with a hepatitis B peptide homologue.

scientific article published on 4 November 2006

Structure of a SARS coronavirus-derived peptide bound to the human major histocompatibility complex class I molecule HLA-B*1501

scientific article

T cell responses induced by attenuated flavivirus vaccination are specific and show limited cross-reactivity with other flavivirus species

scientific article published on 04 March 2020

T cell-mediated hypersensitivity reactions to drugs

scientific article

T cells recognizing a peptide contaminant undetectable by mass spectrometry.

scientific article

The effect of a therapeutic dendritic cell-based cancer vaccination depends on the blockage of CTLA-4 signaling

scientific article published on 01 January 2006

The outermost N-terminal region of tapasin facilitates folding of major histocompatibility complex class I.

scientific article

The peptide-binding specificity of HLA-A*3001 demonstrates membership of the HLA-A3 supertype

scientific article

Treatment of transplanted CT26 tumour with dendritic cell vaccine in combination with blockade of vascular endothelial growth factor receptor 2 and CTLA-4

scientific article published on 31 May 2005

Tumor-associated antigens identified by mRNA expression profiling as tumor rejection epitopes ⬇️

scientific article published on January 29, 2003

Tumor-associated antigens identified by mRNA expression profiling induce protective anti-tumor immunity

scientific article published on 01 April 2001

Use of "one-pot, mix-and-read" peptide-MHC class I tetramers and predictive algorithms to improve detection of cytotoxic T lymphocyte responses in cattle.

scientific article

Vaccination with Replication Deficient Adenovectors Encoding YF-17D Antigens Induces Long-Lasting Protection from Severe Yellow Fever Virus Infection in Mice

scientific article (publication date: February 2016)

Vaccination with p53-peptide-pulsed dendritic cells, of patients with advanced breast cancer: report from a phase I study

scientific article published on 25 February 2004

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