List of works - Miyako Kusano

A new class of plant lipid is essential for protection against phosphorus depletion

scientific article published on January 2013

A novel class of sticky peel and light green mutations causes cuticle deficiency in leaves and fruits of tomato (Solanum lycopersicum).

scientific article published on 27 July 2012

A novel role for methyl cysteinate, a cysteine derivative, in cesium accumulation in Arabidopsis thaliana

scientific article

A strategy for identifying differences in large series of metabolomic samples analyzed by GC/MS.

scientific article published in March 2004

Acetate-mediated novel survival strategy against drought in plants.

scientific article published on 26 June 2017

Adaptation of the symbiotic Mesorhizobium-chickpea relationship to phosphate deficiency relies on reprogramming of whole-plant metabolism.

scientific article published on 22 July 2016

Application of a metabolomic method combining one-dimensional and two-dimensional gas chromatography-time-of-flight/mass spectrometry to metabolic phenotyping of natural variants in rice

scientific article published on 16 May 2007

Assessing metabolomic and chemical diversity of a soybean lineage representing 35 years of breeding

Autophagy negatively regulates cell death by controlling NPR1-dependent salicylic acid signaling during senescence and the innate immune response in Arabidopsis

scientific article published on 22 September 2009

Brevicompanine C, Cyclo-(d-Ile-l-Trp), and Cyclo-(d-Leu-l-Trp), Plant Growth Regulators fromPenicilliumbrevi-compactum

article

Characterization of Volatile Organic Compounds in Mango Ginger (<i>Curcuma amada</i> Roxb.) from Myanmar

scientific article published on 30 December 2020

Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana.

scientific article published on 31 March 2010

Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data

scientific article

Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

scientific article from 2010

Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment

scientific article

Deciphering Starch Quality of Rice Kernels Using Metabolite Profiling and Pedigree Network Analysis

scientific article published on 15 December 2011

Deficiency of Starch Synthase IIIa and IVb Alters Starch Granule Morphology from Polyhedral to Spherical in Rice Endosperm.

scientific article published on 8 January 2016

Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes

scientific article

Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis

scientific article published on 10 February 2012

Ectopic expression of myo-inositol 3-phosphate synthase induces a wide range of metabolic changes and confers salt tolerance in rice

scientific article published on 18 December 2014

Effects of Combined Low Glutathione with Mild Oxidative and Low Phosphorus Stress on the Metabolism of Arabidopsis thaliana

scientific article published on 28 August 2017

Effects of molybdenum deficiency and defects in molybdate transporter MOT1 on transcript accumulation and nitrogen/sulphur metabolism in Arabidopsis thaliana

scientific article published on 03 December 2010

Enhancement of abiotic stress tolerance in poplar by overexpression of key Arabidopsis stress response genes, AtSRK2C and AtGolS2

article

Exploring Matrix Effects and Quantification Performance in Metabolomics Experiments Using Artificial Biological Gradients

scientific article published on 28 June 2011

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics

scientific article

Exploring tomato gene functions based on coexpression modules using graph clustering and differential coexpression approaches

scientific article published on 03 February 2012

GC–TOF-MS- and CE–TOF-MS-Based Metabolic Profiling of Cheonggukjang (Fast-Fermented Bean Paste) during Fermentation and Its Correlation with Metabolic Pathways

scientific article published on 18 September 2012

Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination

scholarly article

Inhibition of CUTIN DEFICIENT 2 Causes Defects in Cuticle Function and Structure and Metabolite Changes in Tomato Fruit

scientific article published on 2 August 2013

Integrated omics approaches in plant systems biology

scientific article published on December 2009

Ky-2, a Histone Deacetylase Inhibitor, Enhances High-Salinity Stress Tolerance in Arabidopsis thaliana

scientific article published on 12 December 2015

MassBank: a public repository for sharing mass spectral data for life sciences

scientific article (publication date: 7 July 2010)

Metabolic Reprogramming in Leaf Lettuce Grown Under Different Light Quality and Intensity Conditions Using Narrow-Band LEDs.

scientific article published on 21 May 2018

Metabolomic Characterization of Knockout Mutants in Arabidopsis: Development of a Metabolite Profiling Database for Knockout Mutants in Arabidopsis. ⬇️

scientific article published on 14 May 2014

Metabolomic Screening Applied to Rice FOX Arabidopsis Lines Leads to the Identification of a Gene-Changing Nitrogen Metabolism

article

Metabolomic approaches toward understanding nitrogen metabolism in plants

scientific article published on 10 January 2011

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach. ⬇️

scientific article published on January 2011

Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice.

scientific article

Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of Arabidopsis to UV-B light

scientific article published on 20 May 2011

Metabolomics-oriented isolation and structure elucidation of 37 compounds including two anthocyanins from Arabidopsis thaliana

scientific article published in May 2009

Myxostiolide, Myxostiol, and Clavatoic Acid, Plant Growth Regulators from the FungusMyxotrichumstipitatum

article

Network Analyses Reveal Shifts in Transcript Profiles and Metabolites That Accompany the Expression of SUN and an Elongated Tomato Fruit

scientific article published on 4 May 2015

Overexpression of an Arabidopsis thaliana galactinol synthase gene improves drought tolerance in transgenic rice and increased grain yield in the field

scientific article

Penipratynolene, a novel nematicide from penicillium bilaiae Chalabuda ⬇️

scientific article published in January 2004

Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation

scientific article

Physiological roles of the beta-substituted alanine synthase gene family in Arabidopsis

scientific article published on 16 November 2007

Plasma membrane aquaporin AqpZ protein is essential for glucose metabolism during photomixotrophic growth of Synechocystis sp. PCC 6803.

scientific article

Predictive metabolite profiling applying hierarchical multivariate curve resolution to GC-MS data--a potential tool for multi-parametric diagnosis

scientific article

Responses of Populus trichocarpa galactinol synthase genes to abiotic stresses

scientific article

Rice Metabolomics

Rice-Arabidopsis FOX line screening with FT-NIR-based fingerprinting for GC-TOF/MS-based metabolite profiling

RiceFOX: a database of Arabidopsis mutant lines overexpressing rice full-length cDNA that contains a wide range of trait information to facilitate analysis of gene function

scientific article

Role of Metabolomics in Crop Improvement

scientific article published in 2012

Stimulation of Mycelia Growth in Several Mushroom Species by Rice Husks

scientific article published on 01 January 2005

Succinic semialdehyde dehydrogenase is involved in the robust patterning of Arabidopsis leaves along the adaxial-abaxial axis

scientific article

Systematic approaches to using the FOX hunting system to identify useful rice genes

article

TargetSearch--a Bioconductor package for the efficient preprocessing of GC-MS metabolite profiling data

scientific article

Tomato Glutamate Decarboxylase Genes SlGAD2 and SlGAD3 Play Key Roles in Regulating γ-Aminobutyric Acid Levels in Tomato (Solanum lycopersicum).

scientific article published on 25 May 2015

Transcript profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR arrhythmic triple mutant reveals a role for the circadian clock in cold stress response.

scientific article

Transcriptomic, Hormonomic and Metabolomic Analyses Highlighted the Common Modules Related to Photosynthesis, Sugar Metabolism and Cell Division in Parthenocarpic Tomato Fruits during Early Fruit Set

scientific article published on 23 April 2022

Unbiased characterization of genotype-dependent metabolic regulations by metabolomic approach in Arabidopsis thaliana

scientific article

Using metabolomic approaches to explore chemical diversity in rice

scientific article

List of works by Miyako Kusano

A new class of plant lipid is essential for protection against phosphorus depletion

A novel class of sticky peel and light green mutations causes cuticle deficiency in leaves and fruits of tomato (Solanum lycopersicum).

A novel role for methyl cysteinate, a cysteine derivative, in cesium accumulation in Arabidopsis thaliana

A strategy for identifying differences in large series of metabolomic samples analyzed by GC/MS.

Acetate-mediated novel survival strategy against drought in plants.

Adaptation of the symbiotic Mesorhizobium-chickpea relationship to phosphate deficiency relies on reprogramming of whole-plant metabolism.

Application of a metabolomic method combining one-dimensional and two-dimensional gas chromatography-time-of-flight/mass spectrometry to metabolic phenotyping of natural variants in rice

Assessing metabolomic and chemical diversity of a soybean lineage representing 35 years of breeding

Autophagy negatively regulates cell death by controlling NPR1-dependent salicylic acid signaling during senescence and the innate immune response in Arabidopsis

Brevicompanine C, Cyclo-(d-Ile-l-Trp), and Cyclo-(d-Leu-l-Trp), Plant Growth Regulators fromPenicilliumbrevi-compactum

Characterization of Volatile Organic Compounds in Mango Ginger (<i>Curcuma amada</i> Roxb.) from Myanmar

Comparative metabolomics charts the impact of genotype-dependent methionine accumulation in Arabidopsis thaliana.

Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data

Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment

Deciphering Starch Quality of Rice Kernels Using Metabolite Profiling and Pedigree Network Analysis

Deficiency of Starch Synthase IIIa and IVb Alters Starch Granule Morphology from Polyhedral to Spherical in Rice Endosperm.

Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes

Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis

Ectopic expression of myo-inositol 3-phosphate synthase induces a wide range of metabolic changes and confers salt tolerance in rice

Effects of Combined Low Glutathione with Mild Oxidative and Low Phosphorus Stress on the Metabolism of Arabidopsis thaliana

Effects of molybdenum deficiency and defects in molybdate transporter MOT1 on transcript accumulation and nitrogen/sulphur metabolism in Arabidopsis thaliana

Enhancement of abiotic stress tolerance in poplar by overexpression of key Arabidopsis stress response genes, AtSRK2C and AtGolS2

Exploring Matrix Effects and Quantification Performance in Metabolomics Experiments Using Artificial Biological Gradients

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics

Exploring tomato gene functions based on coexpression modules using graph clustering and differential coexpression approaches

GC–TOF-MS- and CE–TOF-MS-Based Metabolic Profiling of Cheonggukjang (Fast-Fermented Bean Paste) during Fermentation and Its Correlation with Metabolic Pathways

Impact of clock-associated Arabidopsis pseudo-response regulators in metabolic coordination

Inhibition of CUTIN DEFICIENT 2 Causes Defects in Cuticle Function and Structure and Metabolite Changes in Tomato Fruit

Integrated omics approaches in plant systems biology

Ky-2, a Histone Deacetylase Inhibitor, Enhances High-Salinity Stress Tolerance in Arabidopsis thaliana

MassBank: a public repository for sharing mass spectral data for life sciences

Metabolic Reprogramming in Leaf Lettuce Grown Under Different Light Quality and Intensity Conditions Using Narrow-Band LEDs.

Metabolomic Characterization of Knockout Mutants in Arabidopsis: Development of a Metabolite Profiling Database for Knockout Mutants in Arabidopsis. ⬇️

Metabolomic Screening Applied to Rice FOX Arabidopsis Lines Leads to the Identification of a Gene-Changing Nitrogen Metabolism

Metabolomic approaches toward understanding nitrogen metabolism in plants

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach. ⬇️

Metabolomics data reveal a crucial role of cytosolic glutamine synthetase 1;1 in coordinating metabolic balance in rice.

Metabolomics reveals comprehensive reprogramming involving two independent metabolic responses of Arabidopsis to UV-B light

Metabolomics-oriented isolation and structure elucidation of 37 compounds including two anthocyanins from Arabidopsis thaliana

Myxostiolide, Myxostiol, and Clavatoic Acid, Plant Growth Regulators from the FungusMyxotrichumstipitatum

Network Analyses Reveal Shifts in Transcript Profiles and Metabolites That Accompany the Expression of SUN and an Elongated Tomato Fruit

Overexpression of an Arabidopsis thaliana galactinol synthase gene improves drought tolerance in transgenic rice and increased grain yield in the field

Penipratynolene, a novel nematicide from penicillium bilaiae Chalabuda ⬇️

Phosphoenolpyruvate carboxylase intrinsically located in the chloroplast of rice plays a crucial role in ammonium assimilation

Physiological roles of the beta-substituted alanine synthase gene family in Arabidopsis

Plasma membrane aquaporin AqpZ protein is essential for glucose metabolism during photomixotrophic growth of Synechocystis sp. PCC 6803.

Predictive metabolite profiling applying hierarchical multivariate curve resolution to GC-MS data--a potential tool for multi-parametric diagnosis

Responses of Populus trichocarpa galactinol synthase genes to abiotic stresses

Rice Metabolomics

Rice-Arabidopsis FOX line screening with FT-NIR-based fingerprinting for GC-TOF/MS-based metabolite profiling

RiceFOX: a database of Arabidopsis mutant lines overexpressing rice full-length cDNA that contains a wide range of trait information to facilitate analysis of gene function

Role of Metabolomics in Crop Improvement

Stimulation of Mycelia Growth in Several Mushroom Species by Rice Husks

Succinic semialdehyde dehydrogenase is involved in the robust patterning of Arabidopsis leaves along the adaxial-abaxial axis

Systematic approaches to using the FOX hunting system to identify useful rice genes

TargetSearch--a Bioconductor package for the efficient preprocessing of GC-MS metabolite profiling data

Tomato Glutamate Decarboxylase Genes SlGAD2 and SlGAD3 Play Key Roles in Regulating γ-Aminobutyric Acid Levels in Tomato (Solanum lycopersicum).

Transcript profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR arrhythmic triple mutant reveals a role for the circadian clock in cold stress response.

Transcriptomic, Hormonomic and Metabolomic Analyses Highlighted the Common Modules Related to Photosynthesis, Sugar Metabolism and Cell Division in Parthenocarpic Tomato Fruits during Early Fruit Set

Unbiased characterization of genotype-dependent metabolic regulations by metabolomic approach in Arabidopsis thaliana

Using metabolomic approaches to explore chemical diversity in rice