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List of works by Mingchen Chen

AWSEM-Suite: a protein structure prediction server based on template-guided, coevolutionary-enhanced optimized folding landscapes

scientific article published on 08 May 2020

Aggregation landscapes of Huntingtin exon 1 protein fragments and the critical repeat length for the onset of Huntington's disease

scientific article published on 11 April 2017

Assemblies of calcium/calmodulin-dependent kinase II with actin and their dynamic regulation by calmodulin in dendritic spines

scientific article published on 27 August 2019

Energy landscapes of a mechanical prion and their implications for the molecular mechanism of long-term memory

scientific article published on 18 April 2016

Exploring the F-actin/CPEB3 interaction and its possible role in the molecular mechanism of long-term memory

scientific article published on 26 August 2020

Exploring the aggregation free energy landscape of the amyloid-β protein (1-40).

scientific article published on 03 October 2016

Exploring the interplay between fibrillization and amorphous aggregation channels on the energy landscapes of tau repeat isoforms

scientific article published on 06 February 2020

Forging tools for refining predicted protein structures

scientific article published on 18 April 2019

Molecular-replacement phasing using predicted protein structures from AWSEM-Suite

scientific article published on 27 October 2020

Multiple Binding Configurations of Fis Protein Pairs on DNA: Facilitated Dissociation versus Cooperative Dissociation

scientific article published on 01 November 2019

OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations

scientific article published on 12 February 2021

Protein Folding and Structure Prediction from the Ground Up II: AAWSEM for α/β Proteins

scientific article

Protein Folding and Structure Prediction from the Ground Up: The Atomistic Associative Memory, Water Mediated, Structure and Energy Model

scientific article

Protein Structure Prediction in CASP13 using AWSEM-Suite

scientific article published on 12 May 2020

Protein Structure Refinement Guided by Atomic Packing Frustration Analysis

scientific article published on 15 September 2020

Surveying biomolecular frustration at atomic resolution

scientific article published on 23 November 2020

Surveying the Energy Landscapes of Aβ Fibril Polymorphism

scientific article published on 01 October 2018

Template-Guided Protein Structure Prediction and Refinement Using Optimized Folding Landscape Force Fields

scientific article published on 08 October 2018

The Aggregation Free Energy Landscapes of Polyglutamine Repeats

scientific article published on 27 October 2016

The Associative Memory, Water Mediated, Structure and Energy Model (AWSEM)-Amylometer: Predicting Amyloid Propensity and Fibril Topology Using an Optimized Folding Landscape Model

scientific article

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