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List of works by Peter Ebert

A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains

scientific article published on 28 September 2018

A draft human pangenome reference

scientific article published on 10 May 2023

A general concept for consistent documentation of computational analyses.

scientific article published on 8 June 2015

BiQ Analyzer HiMod: an interactive software tool for high-throughput locus-specific analysis of 5-methylcytosine and its oxidized derivatives

scientific article

Combining transcription factor binding affinities with open-chromatin data for accurate gene expression prediction

scientific article

DNA Methylation Dynamics of Human Hematopoietic Stem Cell Differentiation

scientific article

Epigenetic dynamics of monocyte-to-macrophage differentiation

scientific article published on 29 July 2016

Epigenomic Profiling of Human CD4(+) T Cells Supports a Linear Differentiation Model and Highlights Molecular Regulators of Memory Development

scientific article published on November 2016

Fast detection of differential chromatin domains with SCIDDO

scientific article published on 24 November 2020

Fully phased human genome assembly without parental data using single-cell strand sequencing and long reads

scientific article published on 07 December 2020

Graphasing: phasing diploid genome assembly graphs with single-cell strand sequencing

scientific article published on 10 October 2024

Improving reference epigenome catalogs by computational prediction

scientific article published on April 2015

Integrative analysis of single-cell expression data reveals distinct regulatory states in bidirectional promoters

scientific article published on 10 November 2018

Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes

scientific article published on 11 April 2022

Regions of common inter-individual DNA methylation differences in human monocytes: genetic basis and potential function

scientific article

TEPIC 2 - An extended framework for transcription factor binding prediction and integrative epigenomic analysis

article

Temporal enhancer profiling of parallel lineages identifies AHR and GLIS1 as regulators of mesenchymal multipotency

scientific article published on 14 December 2018

Ten Simple Rules for Developing Usable Software in Computational Biology

scientific article

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