List of works - Tara Pukala

Dillenia (Dilleniaceae) pollen heteromorphy and presentation, and implications for pollination by bats

scientific article published in 2024

A negative ion mass spectrometry approach to identify cross-linked peptides utilizing characteristic disulfide fragmentations

scientific article published on 30 May 2012

A novel bat pollination system involving obligate flower corolla removal has implications for global Dillenia conservation

scientific article published on 03 February 2022

Advanced Resistance Studies Identify Two Discrete Mechanisms in Staphylococcus aureus to Overcome Antibacterial Compounds that Target Biotin Protein Ligase

scientific article published on 06 April 2020

Aβ40 and Aβ42 Amyloid Fibrils Exhibit Distinct Molecular Recycling Properties

scientific article published on 12 April 2011

Binding studies of nNOS-active amphibian peptides and Ca2+ calmodulin, using negative ion electrospray ionisation mass spectrometry

scientific article

Bioactive polyphenol interactions with β amyloid: a comparison of binding modelling, effects on fibril and aggregate formation and neuroprotective capacity

scientific article published in February 2016

Biochemical characterisation of class III biotin protein ligases from Botrytis cinerea and Zymoseptoria tritici

scientific article published on 24 July 2020

C-Phycocyanin from Spirulina Inhibits α-Synuclein and Amyloid-β Fibril Formation but Not Amorphous Aggregation

scientific article published on 08 January 2019

Characterisation of Calmodulin Structural Transitions by Ion Mobility Mass Spectrometry

article

Characterisation of the forest cobra (Naja melanoleuca) venom using a multifaceted mass spectrometric-based approach

scientific article published in February 2024

Chemical Cross-linking and Mass Spectrometry for the Structural Analysis of Protein Assemblies

article

Chemical Synthesis of a Fluorescent IGF-II Analogue

article

Comments on Proteomic Investigations of Two Pakistani Naja Snake Venoms Species Unravel the Venom Complexity, Posttranslational Modifications, and Presence of Extracellular Vesicles. Toxins 2020, 12, 669

scientific article published on 08 December 2020

Conditions for Analysis of Native Protein Structures Using Uniform Field Drift Tube Ion Mobility Mass Spectrometry and Characterization of Stable Calibrants for TWIM-MS

scientific article published on 15 October 2018

Conjugating immunoassays to mass spectrometry: solutions to contemporary challenges in clinical diagnostics

scientific article published on 07 October 2020

Cross-linking/Mass Spectrometry: A Community-Wide, Comparative Study Towards Establishing Best Practice Guidelines

scientific article

Cupiennin 1a, an antimicrobial peptide from the venom of the neotropical wandering spider Cupiennius salei, also inhibits the formation of nitric oxide by neuronal nitric oxide synthase

scientific article published on 22 February 2007

DNA triplex structure, thermodynamics, and destabilisation: insight from molecular simulations

scientific article published on 01 May 2018

Differential proteome analysis of the leaves of lead hyperaccumulator, Rhoeo discolor (L. Her.) Hance

scientific article published on 20 November 2020

Disulfide-containing peptides from the glandular skin secretions of froglets of the genus Crinia: Structure, activity and evolutionary trends

scientific article published on 17 June 2008

Dotting the I's and crossing the T's: A South Australian perspective on variability in troponin thresholds for myocarditis risk in clozapine treatment

scientific article published in 2023

Ecklonia radiata extract containing eckol protects neuronal cells against Aβ1-42 evoked toxicity and reduces aggregate density

scientific article published on 07 July 2020

Effect of Antimicrobial Peptides from Australian Tree Frogs on Anionic Phospholipid Membranes†

article

Efficient biocatalytic C–H bond oxidation: an engineered heme-thiolate peroxygenase from a thermostable cytochrome P450

scientific article published in 2023

Electron transfer ferredoxins with unusual cluster binding motifs support secondary metabolism in many bacteria

scientific article published on 23 August 2018

Engineering C-C Bond Cleavage Activity into a P450 Monooxygenase Enzyme

scientific article published on 26 April 2023

Exploring the Structural Diversity in Inhibitors of α-Synuclein Amyloidogenic Folding, Aggregation, and Neurotoxicity.

scientific article

Fabrication of Piperazine Functionalized Polymeric Monolithic Tip for Rapid Enrichment of Glycopeptides/Glycans

scientific article published on 24 December 2019

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study

scientific article published on 22 May 2019

Fractional Deletion of Compound Kushen Injection Indicates Cytokine Signaling Pathways are Critical for its Perturbation of the Cell Cycle

scientific article published on 02 October 2019

Gallic acid interacts with α-synuclein to prevent the structural collapse necessary for its aggregation

scientific article

Gallic acid is the major component of grape seed extract that inhibits amyloid fibril formation

scientific article

Hemin as a generic and potent protein misfolding inhibitor

scientific article published on 18 October 2014

Histidine-containing host-defence skin peptides of anurans bind Cu2+. An electrospray ionisation mass spectrometry and computational modelling study

scientific article

Host Defence Peptides from the Skin Glands of Australian Amphibians. Caerulein Neuropeptides and Antimicrobial, Anticancer, and nNOS Inhibiting Citropins from the Glandular Frog Litoria subglandulosa

Host-defence peptide profiles of the skin secretions of interspecific hybrid tree frogs and their parents, female Litoria splendida and male Litoria caerulea

scientific article published on 5 July 2006

Host-defence peptides from the glandular secretions of amphibians: structure and activity

scientific article

Host-defence peptides of Australian anurans: structure, mechanism of action and evolutionary significance

scientific article published on June 2004

Importance of Collision Cross Section Measurements by Ion Mobility-Mass Spectrometry in Structural Biology

article

Interrogating the higher order structures of snake venom proteins using an integrated mass spectrometric approach

scientific article published on 03 February 2020

Introduction: Mass Spectrometry Applications in Structural Biology

Investigating the importance of the flexible hinge in caerin 1.1: solution structures and activity of two synthetically modified caerin peptides

scientific article published in February 2004

Ion Mobility Mass Spectrometry Studies of the Inhibition of Alpha Synuclein Amyloid Fibril Formation by ( - )-Epigallocatechin-3-Gallate

article

Ion Mobility-Mass Spectrometry Reveals Details of Formation and Structure for GAA·TCC DNA and RNA Triplexes

article

Ion Mobility—Mass Spectrometry-Based Screening for Inhibition of α-Synuclein Aggregation

article

Mass Spectrometry for Structural Biology: Determining the Composition and Architecture of Protein Complexes

article

Native mass spectrometry identifies an alternative DNA-binding pathway for BirA from Staphylococcus aureus

scientific article published on 26 February 2019

Negative ion fragmentations of disulfide-containing cross-linking reagents are competitive with aspartic acid side-chain-induced cleavages

scientific article published on 01 January 2013

Norbornene Probes for the Detection of Cysteine Sulfenic Acid in Cells

scientific article published on 26 March 2019

Norbornene Probes for the Detection of Cysteine Sulfenic Acid in Cells

Norbornene probes for the study of cysteine oxidation

Novel insights into protein misfolding diseases revealed by ion mobility-mass spectrometry

scientific article

Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase

scientific article published on 21 October 2020

PPARγ in Complex with an Antagonist and Inverse Agonist: a Tumble and Trap Mechanism of the Activation Helix

scientific article published on 01 February 2018

Perspective

article

Polyphenol Honokiol and Flavone 2',3',4'-Trihydroxyflavone Differentially Interact with α-Synuclein at Distinct Phases of Aggregation

scientific article published on 13 November 2020

Rationally Designed Peptide-Based Inhibitor of Aβ42 Fibril Formation and Toxicity: A Potential Therapeutic Strategy for Alzheimer's Disease

scientific article published on 19 May 2020

Reduction of Copper(II) to Copper(I) in the Copper-Curcumin Complex Induces Decomposition of Curcumin

Skin peptide and cDNA profiling of Australian anurans: genus and species identification and evolutionary trends

scientific article published on 13 October 2010

Solution structure and interaction of cupiennin 1a, a spider venom peptide, with phospholipid bilayers

scientific article

Structural Analysis of Calmodulin Binding by nNOS Inhibitory Amphibian Peptides

article

Subunit architecture of multiprotein assemblies determined using restraints from gas-phase measurements

scientific article

The Amyloid Fibril-Forming Properties of the Amphibian Antimicrobial Peptide Uperin 3.5.

scientific article published on 16 December 2015

The Human Amyloid Precursor Protein Binds Copper Ions Dominated by a Picomolar-Affinity Site in the Helix-Rich E2 Domain

scientific article published on 26 June 2018

The molecular chaperone β-casein prevents amorphous and fibrillar aggregation of α-lactalbumin by stabilisation of dynamic disorder

scientific article published on 01 February 2020

Using a Fragment-Based Approach To Target Protein-Protein Interactions

scientific article

Utility of an improved model of amyloid-beta (Aβ₁₋₄₂) toxicity in Caenorhabditis elegans for drug screening for Alzheimer's disease

scientific article

List of works by Tara Pukala

<i>Dillenia</i> (Dilleniaceae) pollen heteromorphy and presentation, and implications for pollination by bats

A negative ion mass spectrometry approach to identify cross-linked peptides utilizing characteristic disulfide fragmentations

A novel bat pollination system involving obligate flower corolla removal has implications for global Dillenia conservation

Advanced Resistance Studies Identify Two Discrete Mechanisms in Staphylococcus aureus to Overcome Antibacterial Compounds that Target Biotin Protein Ligase

Aβ40 and Aβ42 Amyloid Fibrils Exhibit Distinct Molecular Recycling Properties

Binding studies of nNOS-active amphibian peptides and Ca2+ calmodulin, using negative ion electrospray ionisation mass spectrometry

Bioactive polyphenol interactions with β amyloid: a comparison of binding modelling, effects on fibril and aggregate formation and neuroprotective capacity

Biochemical characterisation of class III biotin protein ligases from Botrytis cinerea and Zymoseptoria tritici

C-Phycocyanin from Spirulina Inhibits α-Synuclein and Amyloid-β Fibril Formation but Not Amorphous Aggregation

Characterisation of Calmodulin Structural Transitions by Ion Mobility Mass Spectrometry

Characterisation of the forest cobra (Naja melanoleuca) venom using a multifaceted mass spectrometric-based approach

Chemical Cross-linking and Mass Spectrometry for the Structural Analysis of Protein Assemblies

Chemical Synthesis of a Fluorescent IGF-II Analogue

Comments on Proteomic Investigations of Two Pakistani <i>Naja</i> Snake Venoms Species Unravel the Venom Complexity, Posttranslational Modifications, and Presence of Extracellular Vesicles. <i>Toxins</i> 2020, <i>12</i>, 669

Conditions for Analysis of Native Protein Structures Using Uniform Field Drift Tube Ion Mobility Mass Spectrometry and Characterization of Stable Calibrants for TWIM-MS

Conjugating immunoassays to mass spectrometry: solutions to contemporary challenges in clinical diagnostics

Cross-linking/Mass Spectrometry: A Community-Wide, Comparative Study Towards Establishing Best Practice Guidelines

Cupiennin 1a, an antimicrobial peptide from the venom of the neotropical wandering spider Cupiennius salei, also inhibits the formation of nitric oxide by neuronal nitric oxide synthase

DNA triplex structure, thermodynamics, and destabilisation: insight from molecular simulations

Differential proteome analysis of the leaves of lead hyperaccumulator, Rhoeo discolor (L. Her.) Hance

Disulfide-containing peptides from the glandular skin secretions of froglets of the genus Crinia: Structure, activity and evolutionary trends

Dotting the I's and crossing the T's: A South Australian perspective on variability in troponin thresholds for myocarditis risk in clozapine treatment

Ecklonia radiata extract containing eckol protects neuronal cells against Aβ1-42 evoked toxicity and reduces aggregate density

Effect of Antimicrobial Peptides from Australian Tree Frogs on Anionic Phospholipid Membranes†

Efficient biocatalytic C–H bond oxidation: an engineered heme-thiolate peroxygenase from a thermostable cytochrome P450

Electron transfer ferredoxins with unusual cluster binding motifs support secondary metabolism in many bacteria

Engineering C-C Bond Cleavage Activity into a P450 Monooxygenase Enzyme

Exploring the Structural Diversity in Inhibitors of α-Synuclein Amyloidogenic Folding, Aggregation, and Neurotoxicity.

Fabrication of Piperazine Functionalized Polymeric Monolithic Tip for Rapid Enrichment of Glycopeptides/Glycans

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study

Fractional Deletion of Compound Kushen Injection Indicates Cytokine Signaling Pathways are Critical for its Perturbation of the Cell Cycle

Gallic acid interacts with α-synuclein to prevent the structural collapse necessary for its aggregation

Gallic acid is the major component of grape seed extract that inhibits amyloid fibril formation

Hemin as a generic and potent protein misfolding inhibitor

Histidine-containing host-defence skin peptides of anurans bind Cu2+. An electrospray ionisation mass spectrometry and computational modelling study

Host Defence Peptides from the Skin Glands of Australian Amphibians. Caerulein Neuropeptides and Antimicrobial, Anticancer, and nNOS Inhibiting Citropins from the Glandular Frog Litoria subglandulosa

Host-defence peptide profiles of the skin secretions of interspecific hybrid tree frogs and their parents, female Litoria splendida and male Litoria caerulea

Host-defence peptides from the glandular secretions of amphibians: structure and activity

Host-defence peptides of Australian anurans: structure, mechanism of action and evolutionary significance

Importance of Collision Cross Section Measurements by Ion Mobility-Mass Spectrometry in Structural Biology

Interrogating the higher order structures of snake venom proteins using an integrated mass spectrometric approach

Introduction: Mass Spectrometry Applications in Structural Biology

Investigating the importance of the flexible hinge in caerin 1.1: solution structures and activity of two synthetically modified caerin peptides

Ion Mobility Mass Spectrometry Studies of the Inhibition of Alpha Synuclein Amyloid Fibril Formation by ( - )-Epigallocatechin-3-Gallate

Ion Mobility-Mass Spectrometry Reveals Details of Formation and Structure for GAA·TCC DNA and RNA Triplexes

Ion Mobility—Mass Spectrometry-Based Screening for Inhibition of α-Synuclein Aggregation

Mass Spectrometry for Structural Biology: Determining the Composition and Architecture of Protein Complexes

Native mass spectrometry identifies an alternative DNA-binding pathway for BirA from Staphylococcus aureus

Negative ion fragmentations of disulfide-containing cross-linking reagents are competitive with aspartic acid side-chain-induced cleavages

Norbornene Probes for the Detection of Cysteine Sulfenic Acid in Cells

Norbornene Probes for the Detection of Cysteine Sulfenic Acid in Cells

Norbornene probes for the study of cysteine oxidation

Novel insights into protein misfolding diseases revealed by ion mobility-mass spectrometry

Nucleoside selectivity of Aspergillus fumigatus nucleoside-diphosphate kinase

PPARγ in Complex with an Antagonist and Inverse Agonist: a Tumble and Trap Mechanism of the Activation Helix

Perspective

Polyphenol Honokiol and Flavone 2',3',4'-Trihydroxyflavone Differentially Interact with α-Synuclein at Distinct Phases of Aggregation

Rationally Designed Peptide-Based Inhibitor of Aβ42 Fibril Formation and Toxicity: A Potential Therapeutic Strategy for Alzheimer's Disease

Reduction of Copper(II) to Copper(I) in the Copper-Curcumin Complex Induces Decomposition of Curcumin

Skin peptide and cDNA profiling of Australian anurans: genus and species identification and evolutionary trends

Solution structure and interaction of cupiennin 1a, a spider venom peptide, with phospholipid bilayers

Structural Analysis of Calmodulin Binding by nNOS Inhibitory Amphibian Peptides

Subunit architecture of multiprotein assemblies determined using restraints from gas-phase measurements

The Amyloid Fibril-Forming Properties of the Amphibian Antimicrobial Peptide Uperin 3.5.

The Human Amyloid Precursor Protein Binds Copper Ions Dominated by a Picomolar-Affinity Site in the Helix-Rich E2 Domain

The molecular chaperone β-casein prevents amorphous and fibrillar aggregation of α-lactalbumin by stabilisation of dynamic disorder

Using a Fragment-Based Approach To Target Protein-Protein Interactions

Utility of an improved model of amyloid-beta (Aβ₁₋₄₂) toxicity in Caenorhabditis elegans for drug screening for Alzheimer's disease