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List of works by Rémi N Charrel

2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

scientific article published on 04 September 2020

A retrospective overview of enterovirus infection diagnosis and molecular epidemiology in the public hospitals of Marseille, France (1985-2005).

scientific article

A secondary dengue 4 infection in a traveler returning from Haiti confirmed by virus isolation, complete genome sequencing and neutralisation assay: a brief report

scientific article published on 3 January 2015

A sero-epidemiological study of arboviral fevers in Djibouti, Horn of Africa

scientific article

A simple method for molecular detection of Swine-origin and human-origin influenza a virus

scientific article published in April 2010

Acquired hydrocephalus caused by a variant lymphocytic choriomeningitis virus

scientific article

Acquisition of respiratory and gastrointestinal pathogens among health care workers during the 2015 Hajj season

article

Aetiology and Outcomes of Suspected Infections of the Central Nervous System in Children in Mbarara, Uganda

scientific article

Alkhurma haemorrhagic fever--a viral haemorrhagic disease unique to the Arabian Peninsula

scientific article published on 30 August 2010

Alkhurma hemorrhagic fever in travelers returning from Egypt, 2010.

scientific article published in August 2011

Alkhurma hemorrhagic fever virus in Ornithodoros savignyi ticks

scientific article

An Outbreak of Kingella Kingae Infections Complicating a Severe Hand, Foot, And Mouth Disease Outbreak in Nice, France, 2016.

scientific article published on 19 December 2016

An approach based on RFLP assay to investigate outbreaks of enteroviral meningitis

scientific article published in January 2004

An outbreak of Kingella kingae infections associated with hand, foot and mouth disease/herpangina virus outbreak in Marseille, France, 2013.

scientific article published on March 2015

Annual (2023) taxonomic update of RNA-directed RNA polymerase-encoding negative-sense RNA viruses (realm Riboviria: kingdom Orthornavirae: phylum Negarnaviricota)

scientific article published in 2023

Antibody Response to Toscana Virus and Sandfly Fever Sicilian Virus in Cats Naturally Exposed to Phlebotomine Sand Fly Bites in Portugal

scientific article published on 11 September 2019

Antiviral treatment of chikungunya virus infection

scientific article published on April 2009

Arenaviruses other than Lassa virus

scientific article

Arthropods as a source of new RNA viruses

scientific article

Authors' response: Plenty of coronaviruses but no SARS-CoV-2

scientific article published on 01 February 2020

Background review for diagnostic test development for Zika virus infection

scientific article

Biosafety and Biosecurity in European Containment Level 3 Laboratories: Focus on French Recent Progress and Essential Requirements

scientific article

Broader Geographical Distribution of Toscana Virus in the Mediterranean Region Suggests the Existence of Larger Varieties of Sand Fly Vectors

scientific article published on 14 January 2020

Chikungunya infection: an emerging rheumatism among travelers returned from Indian Ocean islands. Report of 47 cases

scientific article

Chikungunya outbreaks--the globalization of vectorborne diseases

scientific article

Chikungunya virus adapts to tiger mosquito via evolutionary convergence: a sign of things to come?

scientific article

Circulation of Toscana Virus in a Sample Population of Corsica, France

scientific article published on 04 September 2019

Circulation of respiratory viruses among pilgrims during the 2012 Hajj pilgrimage

scientific article published on 9 July 2013

Clinical and virological factors associated with gastrointestinal symptoms in patients with acute respiratory infection: a two-year prospective study in general practice medicine

scientific article published on 22 November 2017

Comparative production analysis of three phlebovirus nucleoproteins under denaturing or non-denaturing conditions for crystallographic studies

scientific article

Comparative sequence analysis of American, European and Asian isolates of viruses in the genus Coltivirus

scientific article

Comparison of nasal swabs with throat swabs for the detection of respiratory viruses by real-time reverse transcriptase PCR in adult Hajj pilgrims

scientific article published in September 2014

Complete Coding Sequence of Zika Virus from a French Polynesia Outbreak in 2013

scientific article

Complete coding sequence of Zika virus from Martinique outbreak in 2015

scientific article

Complete coding sequence of the Alkhurma virus, a tick-borne flavivirus causing severe hemorrhagic fever in humans in Saudi Arabia

scientific article (publication date: 21 September 2001)

Concurrent Chikungunya and Dengue Virus Infections during Simultaneous Outbreaks, Gabon, 2007

scientific article (publication date: April 2009)

Concurrent dengue and malaria

scientific article published in July 2005

Contribution of a shelter-based survey for screening respiratory diseases in the homeless

scientific article published on 22 January 2009

Correction: Point of Care Strategy for Rapid Diagnosis of Novel A/H1N1 Influenza Virus

scientific article published on 27 April 2010

Delayed Laboratory Response to COVID-19 Caused by Molecular Diagnostic Contamination

scientific article published on 20 May 2020

Detection of Two Species of the Genus Parapoxvirus (Bovine Papular Stomatitis Virus and Pseudocowpox Virus) in Ticks Infesting Cattle in Burkina Faso

scientific article published on 28 April 2020

Detection of a Novel Phlebovirus (Drin Virus) from Sand Flies in Albania.

scientific article

Development and Evaluation of a Duo Chikungunya Virus Real-Time RT-PCR Assay Targeting Two Regions within the Genome

scientific article published on 15 August 2019

Development and Evaluation of a Duo Zaire ebolavirus Real-Time RT-PCR Assay Targeting Two Regions within the Genome

scientific article published on 04 December 2019

Development and Evaluation of a duo SARS-CoV-2 RT-qPCR Assay Combining Two Assays Approved by the World Health Organization Targeting the Envelope and the RNA-Dependant RNA Polymerase (RdRp) Coding Regions

scientific article published on 25 June 2020

Diagnosis of arboviral infections--A quagmire of cross reactions and complexities

scientific article published on 29 January 2016

Diagnosis of west nile virus human infections: overview and proposal of diagnostic protocols considering the results of external quality assessment studies

scientific article published on 25 September 2013

Direct evidence for an expanded circulation area of the recently identified Balkan virus (Sandfly fever Naples virus species) in several countries of the Balkan archipelago.

scientific article published on 29 August 2017

Drastic decline of hepatitis E virus detection in domestic pigs after the age of 6 months, Corsica, France

scientific article published on 06 August 2019

EPIMIC: A Simple Homemade Computer Program for Real-Time EPIdemiological Surveillance and Alert Based on MICrobiological Data

scientific article

Ecuador Paraiso Escondido Virus, a New Flavivirus Isolated from New World Sand Flies in Ecuador, Is the First Representative of a Novel Clade in the Genus Flavivirus

scientific article

Effect of chemical stabilizers on the thermostability and infectivity of a representative panel of freeze dried viruses

scientific article

Emergence of Toscana virus in the mediterranean area

scientific article published on October 2012

Emerging viral respiratory tract infections--environmental risk factors and transmission

scientific article published on September 2014

Epidemiologic relationship between Toscana virus infection and Leishmania infantum due to common exposure to Phlebotomus perniciosus sandfly vector

scientific article (publication date: September 2011)

Epidemiology and Clinical Symptoms Related to Seasonal Coronavirus Identified in Patients with Acute Respiratory Infections Consulting in Primary Care over Six Influenza Seasons (2014-2020) in France

scientific article published on 10 June 2020

Evaluation of Chemical Protocols for Inactivating SARS-CoV-2 Infectious Samples

scientific article published on 08 June 2020

Evaluation of the first commercial chikungunya virus indirect immunofluorescence test

scientific article

Experimental Infection of Dogs with Toscana Virus and Sandfly Fever Sicilian Virus to Determine Their Potential as Possible Vertebrate Hosts

scientific article published on 20 April 2020

Experimental Infection of Sand Flies by Massilia Virus and Viral Transmission by Co-Feeding on Sugar Meal

article

Fatal case of Reye's syndrome associated with H3N2 influenza virus infection and salicylate intake in a 12-year-old patient.

scientific article

First Identification and Genomic Characterization of a Porcine Sapelovirus from Corsica, France, 2017

scientific article published on 20 September 2018

First detection of Ehrlichia minasensis in Hyalomma marginatum ticks collected from cattle in Corsica, France

article

First detection of Leishmania infantum DNA in Phlebotomus longicuspis Nitzulescu, 1930 from visceral leishmaniasis endemic focus in Algeria

scientific article

First detection of Leishmania major DNA in Sergentomyia (Spelaeomyia) darlingi from cutaneous leishmaniasis foci in Mali

scientific article

First molecular detection of Rickettsia africae in a tropical bont tick, Amblyomma variegatum, collected in Corsica, France

scientific article published on 17 January 2019

Genetic characterization of tick-borne flaviviruses: new insights into evolution, pathogenetic determinants and taxonomy

scientific article

Genomics and evolution of Aedes-borne flaviviruses

scientific article

Geographic Distribution and Genetic Diversity of Whitewater Arroyo Virus in the Southwestern United States

scientific article (publication date: 2001)

Hajj, Umrah, and other mass gatherings: which pathogens do you expect? Beware of the tree that hides the forest!

scientific article published on 10 September 2014

Hand, foot and mouth disease and Kingella kingae infections

scientific article published in May 2015

Heat Inactivation of Different Types of SARS-CoV-2 Samples: What Protocols for Biosafety, Molecular Detection and Serological Diagnostics?

scientific article published on 07 July 2020

Hepatitis E in High-Income Countries: What Do We Know? And What Are the Knowledge Gaps?

scientific article published on 25 May 2018

Host-Associated Metagenomics: A Guide to Generating Infectious RNA Viromes

scientific article published on 2 October 2015

How Did Zika Virus Emerge in the Pacific Islands and Latin America?

scientific article

Identification of dengue type 2 virus in febrile travellers returning from Burkina Faso to France, related to an ongoing outbreak, October to November 2016.

scientific article

Immunity to measles, diphtheria and tetanus in residents of homeless shelters in Marseilles, France

article

Improving the diagnostic efficiency of H1N1 2009 pandemic flu: analysis of predictive clinical signs through a prospective cohort.

scientific article

Infections in symptomatic travelers returning from the Arabian peninsula to France: A retrospective cross-sectional study

scientific article published on 13 May 2016

Influenza vaccine for Hajj and Umrah pilgrims

scientific article published in March 2015

Influenza-attributable deaths in south-eastern France (1999 to 2010): mortality predictions were undependable.

scientific article

Interim report on the A/H1N1 influenza virus pandemic in Marseille, France, April-November 2009.

scientific article

Isolation and sequencing of Dashli virus, a novel Sicilian-like virus in sandflies from Iran; genetic and phylogenetic evidence for the creation of one novel species within the Phlebovirus genus in the Phenuiviridae family

scientific article published on 27 December 2017

Lack of MERS coronavirus but prevalence of influenza virus in French pilgrims after 2013 Hajj

scientific article published on April 2014

Likely correlation between sources of information and acceptability of A/H1N1 swine-origin influenza virus vaccine in Marseille, France

scientific article

List of Contributors

Long PCR Product Sequencing (LoPPS): a shotgun-based approach to sequence long PCR products

scientific article

Low diversity of Alkhurma hemorrhagic fever virus, Saudi Arabia, 1994-1999

scientific article

Lyophilized Matrix Containing Ready-to-Use Primers and Probe Solution for Standardization of Real-Time PCR and RT-qPCR Diagnostics in Virology

scientific article published on 30 January 2020

Many More Microbes in Humans: Enlarging the Microbiome Repertoire

scientific article published on August 2017

Massilia virus, a novel Phlebovirus (Bunyaviridae) isolated from sandflies in the Mediterranean

scientific article

Medical Entomology: A Reemerging Field of Research to Better Understand Vector-Borne Infectious Diseases

scientific article published on August 2017

Meta-Analysis of Human IgG anti-HEV Seroprevalence in Industrialized Countries and a Review of Literature

article

Models cannot predict future outbreaks: A/H1N1 virus, the paradigm

scientific article

Molecular Detection of Spotted-Fever Group Rickettsiae in Ticks Collected from Domestic and Wild Animals in Corsica, France

scientific article published on 04 September 2019

Molecular and serological evidence for the presence of novel phleboviruses in sandflies from northern algeria

scientific article

Molecular screening of Anaplasmataceae in ticks collected from cattle in Corsica, France

scientific article published on 29 July 2020

Mouse-to-human transmission of variant lymphocytic choriomeningitis virus

scientific article

Need for additional capacity and improved capability for molecular detection of yellow fever virus in European Expert Laboratories: External Quality Assessment, March 2018

article by Cristina Domingo et al published July 2018 in Eurosurveillance

Neglected vector-borne bacterial diseases and arboviruses in the Mediterranean area

scientific article published on 30 August 2018

New insights into flavivirus evolution, taxonomy and biogeographic history, extended by analysis of canonical and alternative coding sequences

scientific article

Novel and emergent sandfly-borne phleboviruses in Asia Minor: a systematic review.

scientific article

Novel chikungunya virus variant in travelers returning from Indian Ocean islands

scientific article published on October 2006

Novel virus influenza A (H1N1sw) in South-Eastern France, April-August 2009.

scientific article

On chikungunya acute infection and chloroquine treatment

scientific article

POC tests: from antigen detection to molecular methods. Future trends

scientific article published in December 2010

Past, present, and future of arenavirus taxonomy

scientific article

Patterns of Kingella kingae Disease Outbreaks

scientific article

Phylogeny of the genus Arenavirus

scientific article

Point of care strategy for rapid diagnosis of novel A/H1N1 influenza virus

scientific article published in PLoS ONE

Point of care strategy for rapid diagnosis of novel A/H1N1 influenza virus.

scientific article

Prevalence of gastrointestinal symptoms in patients with influenza, clinical significance, and pathophysiology of human influenza viruses in faecal samples: what do we know?

scientific article

Prospective comparative study of characteristics associated with influenza A and B in adults

scientific article published on 16 December 2017

Prospective detection of chikungunya virus in blood donors, Caribbean 2014.

scientific article published in June 2014

RNA and DNA bacteriophages as molecular diagnosis controls in clinical virology: a comprehensive study of more than 45,000 routine PCR tests

scientific article

Respiratory viruses and bacteria among pilgrims during the 2013 Hajj

scientific article

Respiratory viruses within homeless shelters in Marseille, France

scientific article

Revolutionizing clinical microbiology laboratory organization in hospitals with in situ point-of-care

scientific article

Risk factors for seasonal influenza virus detection in stools of patients consulting in general practice for acute respiratory infections in France, 2014-2016.

scientific article published on 16 November 2017

Sandfly Fever Sicilian Virus, Algeria

scientific article (publication date: May 2008)

Sandfly fever due to Toscana virus: an emerging infection in southern France

scientific article published on August 2004

Sandfly-borne phleboviruses of Eurasia and Africa: epidemiology, genetic diversity, geographic range, control measures

scientific article

Serological study of the 2009 pandemic due to influenza A H1N1 in the metropolitan French population

scientific article

Seroprevalence of SARS-CoV-2 IgG Antibodies in Corsica (France), April and June 2020

scientific article published on 05 November 2020

Seroprevalence of Toscana virus in dogs from Corsica, France

scientific article (publication date: July 2016)

Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018.

scientific article published on 21 April 2018

Taxonomy of the order Bunyavirales: second update 2018

article by Piet Maes et al published 20 January 2019 in Archives of Virology

The European Virus Archive goes global: A growing resource for research

scientific article published on 29 July 2018

The N-Terminal Domain of the Arenavirus L Protein Is an RNA Endonuclease Essential in mRNA Transcription

scientific article

The VIZIER project: preparedness against pathogenic RNA viruses

scientific article

The Whitewater Arroyo virus: natural evidence for genetic recombination among Tacaribe serocomplex viruses (family Arenaviridae).

scientific article published in May 2001

The hexamer structure of Rift Valley fever virus nucleoprotein suggests a mechanism for its assembly into ribonucleoprotein complexes

scientific article

The nasopharyngeal microbiota in patients with viral respiratory tract infections is enriched in bacterial pathogens

scientific article published on 22 July 2018

The viral etiology of an influenza‐like illness during the 2009 pandemic ⬇️

scientific article published on July 1, 2012

Three New Orbivirus Species Isolated from Farmed White-Tailed Deer (Odocoileus virginianus) in the United States

scientific article published on 20 December 2019

Tick-borne virus diseases of human interest in Europe

scientific article

Toscana virus nucleoprotein oligomer organization observed in solution.

scientific article published on 28 July 2017

Travel-related influenza A/H1N1 infection at a rock festival in Hungary: one virus may hide another one.

scientific article

Variable sensitivity in molecular detection of Zika virus in European expert laboratories; external quality assessment, November 2016.

scientific article published on 23 August 2017

West Nile virus, an emerging arbovirus

scientific article published on December 2004

Yellow fever in the diagnostics laboratory

scholarly article published by Jonas Schmidt-Chanasit in 2018

Zika virus in asymptomatic blood donors in Martinique

scientific article

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