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List of works by Burkhard Morgenstern

A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes

scientific article

AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome

scientific article published on 7 August 2006

DIALIGN P: fast pair-wise and multiple sequence alignment using parallel processors

scientific article

DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment

scientific article

DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment

2008 scientific article

Detection of viral sequence fragments of HIV-1 subfamilies yet unknown

scientific article

Fast and sensitive multiple alignment of large genomic sequences

scientific article

Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources

scientific article

Gene prediction in metagenomic fragments: a large scale machine learning approach

scientific article

Improved coverage of cDNA-AFLP by sequential digestion of immobilized cDNA

scientific article

Multiple sequence alignment with user-defined anchor points

scientific article published on 19 April 2006

New journal: Algorithms for Molecular Biology

scientific article published on 28 February 2006

OrthoSelect: a protocol for selecting orthologous groups in phylogenomics

scientific article published on 16 July 2009

Phylogeny reconstruction based on the length distribution of k-mismatch common substrings

scientific article published on 11 December 2017

Stability of multiple alignments and phylogenetic trees: an analysis of ABC-transporter proteins family

scientific article published on 6 November 2008

The number of k-mer matches between two DNA sequences as a function of k and applications to estimate phylogenetic distances

scientific article published on 10 February 2020

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