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List of works by Athanasios Typas

A Chemical-Genomic Screen of Neglected Antibiotics Reveals Illicit Transport of Kasugamycin and Blasticidin S

scientific article

A genome-wide screen for bacterial envelope biogenesis mutants identifies a novel factor involved in cell wall precursor metabolism

scientific article (publication date: 2014)

A resource of variant effect predictions of single nucleotide variants in model organisms

Bactericidal effect of tetracycline in E. coli strain ED1a may be associated with ribosome dysfunction

scientific article published in 2024

Bioaccumulation of therapeutic drugs by human gut bacteria

scientific article published in 2021

Bioactivity assessment of natural compounds using machine learning models trained on target similarity between drugs

scientific article published on 25 April 2022

Coordination of peptidoglycan synthesis and outer membrane constriction during Escherichia coli cell division

scientific article published on 7 May 2015

Country-specific antibiotic use practices impact the human gut resistome

scientific article published on 08 April 2013

Detecting envelope stress by monitoring β-barrel assembly.

scientific article

Differential ability of sigma(s) and sigma70 of Escherichia coli to utilize promoters containing half or full UP-element sites

scientific article published in January 2005

Dynamic protein complexes for cell growth

scientific article published on 17 March 2014

Early midcell localization of Escherichia coli PBP4 supports the function of peptidoglycan amidases

scientific article published on 23 May 2022

Editorial overview: Microbial systems biology

scientific article published on 20 October 2015

Escherichia coli limits Salmonella Typhimurium infections after diet shifts and fat-mediated microbiota perturbation in mice

scientific article published on 07 October 2019

Escherichia coli σ 70 senses sequence and conformation of the promoter spacer region

scientific article published on March 11, 2011

Fe-S cluster biosynthesis controls uptake of aminoglycosides in a ROS-less death pathway

scientific article published in June 2013

From the regulation of peptidoglycan synthesis to bacterial growth and morphology.

scientific article

High-throughput approaches to understanding gene function and mapping network architecture in bacteria

scientific article published on 09 February 2013

High-throughput functional characterization of protein phosphorylation sites in yeast

scientific article published on 18 October 2021

High-throughput, quantitative analyses of genetic interactions in E. coli

scientific article

Individuality and temporal stability of the human gut microbiome.

scientific article published in January 2013

Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundances

scientific article published on 14 January 2016

Nutritional preferences of human gut bacteria reveal their metabolic idiosyncrasies

scientific article published on 19 March 2018

Outer membrane lipoprotein NlpI scaffolds peptidoglycan hydrolases within multi-enzyme complexes in Escherichia coli

scientific article published on 03 February 2020

Outer-membrane lipoprotein LpoB spans the periplasm to stimulate the peptidoglycan synthase PBP1B

scientific article

Phenotypic landscape of a bacterial cell

scientific article

Recovery of gut microbiota of healthy adults following antibiotic exposure

scientific article published on 22 October 2018

Regulation of peptidoglycan synthesis by outer-membrane proteins

scientific article published on December 2010

Role of the spacer between the -35 and -10 regions in sigmas promoter selectivity in Escherichia coli

scientific article published in February 2006

SARS-CoV-2 infection remodels the host protein thermal stability landscape

scientific article published on 01 February 2021

Salt-responsive gut commensal modulates TH17 axis and disease

scientific article published on 15 November 2017

Selective ribosome profiling reveals the cotranslational chaperone action of trigger factor in vivo

scientific article

Spatiotemporal proteomics uncovers cathepsin-dependent macrophage cell death during Salmonella infection

scientific article published on 08 June 2020

Stationary phase reorganisation of the Escherichia coli transcription machinery by Crl protein, a fine-tuner of sigmas activity and levels

scientific article published on March 2007

The -35 sequence location and the Fis-sigma factor interface determine sigmas selectivity of the proP (P2) promoter in Escherichia coli.

scientific article published in February 2007

The functional proteome landscape of Escherichia coli

scientific article published on 09 December 2020

The impact of the genetic background on gene deletion phenotypes in Saccharomyces cerevisiae

scientific article published on 01 December 2019

The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase.

scientific article published on March 2007

Thermal proteome profiling for interrogating protein interactions

scientific article published on 01 March 2020

Thermal proteome profiling in bacteria: probing protein state

scientific article published on 06 July 2018

Transcriptional and Post-Transcriptional Polar Effects in Bacterial Gene Deletion Libraries

publication published on 07 September 2021