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List of works by John F Baines

A change of expression in the conserved signaling gene MKK7 is associated with a selective sweep in the western house mouse Mus musculus domesticus.

scientific article

Bacterial colonization of Hydra hatchlings follows a robust temporal pattern

scientific article published on 24 January 2013

Colonic mucosa-associated microbiota is influenced by an interaction of Crohn disease and FUT2 (Secretor) genotype

scientific article published on 8 November 2011

Composition of microbial oral biofilms during maturation in young healthy adults

scientific article

Compounds associated with algal surfaces mediate epiphytic colonization of the marine macroalga Fucus vesiculosus

scientific article published on 05 February 2013

Dietary history contributes to enterotype-like clustering and functional metagenomic content in the intestinal microbiome of wild mice.

scientific article

Distinct antimicrobial peptide expression determines host species-specific bacterial associations

scientific article

Draft Genome Sequences of 11 Staphylococcus epidermidis Strains Isolated from Wild Mouse Species.

scientific article published on 16 January 2014

Evolution of mating isolation between populations of Drosophila ananassae

scientific article

Exceptionally high levels of recombination across the honey bee genome.

scientific article

Expression of the blood-group-related glycosyltransferase B4galnt2 influences the intestinal microbiota in mice

scientific article

Extended analysis of a genome-wide association study in primary sclerosing cholangitis detects multiple novel risk loci

scientific article

Genome-wide mapping of gene-microbiota interactions in susceptibility to autoimmune skin blistering

scientific article

Getting the Hologenome Concept Right: an Eco-Evolutionary Framework for Hosts and Their Microbiomes

scientific article (publication date: 29 March 2016)

Host species and environmental effects on bacterial communities associated with Drosophila in the laboratory and in the natural environment

scientific article

Molecular evolution of sex-biased genes in the Drosophila ananassae subgroup

scientific article

MyD88-deficient Hydra reveal an ancient function of TLR signaling in sensing bacterial colonizers

scientific article

Nod2 is essential for temporal development of intestinal microbial communities.

scientific article

Noninvasive analysis of microbiome dynamics in the fruit fly Drosophila melanogaster

scientific article

Reduced X-linked diversity in derived populations of house mice

scientific article published on 7 February 2007

Selection on cis-regulatory variation at B4galnt2 and its influence on von Willebrand factor in house mice

scientific article published on 16 December 2008

The influence of demography and weak selection on the McDonald-Kreitman test: an empirical study in Drosophila.

scientific article published on 6 January 2009

The role of biogeography in shaping diversity of the intestinal microbiota in house mice

scientific article published on 7 February 2013

The role of natural selection in genetic differentiation of worldwide populations of Drosophila ananassae

scientific article published on December 2004

The transcriptional response of Drosophila melanogaster to infection with the sigma virus (Rhabdoviridae).

scientific article published on 31 August 2009

Type I interferon signalling in the intestinal epithelium affects Paneth cells, microbial ecology and epithelial regeneration.

scientific article

X chromosome inactivation during Drosophila spermatogenesis

scientific article

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