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List of works by Chojiro Kojima

(1)H, (15)N and (13)C resonance assignments of the conserved region in the middle domain of S. pombe Sin1 protein

scientific article published on 8 March 2014

14-3-3 proteins act as intracellular receptors for rice Hd3a florigen

scientific article

15N-15N J-coupling across Hg(II): direct observation of Hg(II)-mediated T-T base pairs in a DNA duplex

scientific article published on 01 January 2007

1H, 13C and 15N NMR assignments of the Escherichia coli Orf135 protein

scientific article published on 07 May 2011

1H, 13C and 15N resonance assignments of the VAP-A: OSBP complex

scientific article published on 20 September 2006

1H, 15N and 13C backbone and side-chain assignments of the rice phytochrome B PAS1 domain and backbone assignments of the PAS1-PAS2 domain

scientific article

A functional link between RuBisCO-like protein of Bacillus and photosynthetic RuBisCO

scientific journal article

Active repression of IFN regulatory factor-1-mediated transactivation by IFN regulatory factor-4.

scientific article published on 19 September 2005

Amino Acid Selective 13C Labeling and 13C Scrambling Profile Analysis of Protein α and Side-Chain Carbons in Escherichia coli Utilized for Protein Nuclear Magnetic Resonance

scientific article published on 20 June 2018

Amino acid residues involved in substrate recognition of the Escherichia coli Orf135 protein

scientific article

Bacterial effector modulation of host E3 ligase activity suppresses PAMP-triggered immunity in rice

scientific article published on 12 November 2014

Crystallographic characterization of the N-terminal domain of a plant NADPH oxidase.

scientific article published on 29 August 2008

Current NMR Techniques for Structure-Based Drug Discovery.

scientific article published on 12 January 2018

DNA duplex dynamics: NMR relaxation studies of a decamer with uniformly 13C-labeled purine nucleotides

scientific article

Direct detection of the mercury-nitrogen bond in the thymine-Hg(II)-thymine base-pair with (199)Hg NMR spectroscopy

scientific article published on 01 May 2015

Disassembling and bleaching of chloride-free pharaonis halorhodopsin by octyl-beta-glucoside

scientific article published in October 2005

Efficient protein production method for NMR using soluble protein tags with cold shock expression vector

scientific article published on 16 September 2010

Electrostatic interaction between oxysterol-binding protein and VAMP-associated protein A revealed by NMR and mutagenesis studies

scientific article

Enzymatic Characterization of 5-Methylthioribose 1-Phosphate Isomerase from Bacillus subtilis

scientific article published on 07 August 2007

Enzymatic characterization of 5-methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway in Bacillus subtilis

scientific article

Exploring a DNA Sequence for the Three-Dimensional Structure Determination of a Silver(I)-Mediated C-C Base Pair in a DNA Duplex By (1)H NMR Spectroscopy

scientific article published on 17 November 2015

Filtering methods for selection of singlet and doublet signals in NMR spectra of DNA oligomers

scientific article published in March 1994

Formation of a thymine-Hg(II)-thymine metal-mediated DNA base pair: proposal and theoretical calculation of the reaction pathway

scientific article

Identification of the metal ion binding site on an RNA motif from hammerhead ribozymes using (15)N NMR spectroscopy

scientific article published in May 2002

In-cell NMR as a sensitive tool to monitor physiological condition of Escherichia coli

scientific article published on 12 February 2020

Induced structural changes in protein-DNA complexes

scientific article

Insights into substrate recognition by the Escherichia coli Orf135 protein through its solution structure

scientific article published on 05 March 2012

Intermolecular contacts between the lambda-Cro repressor and the operator DNA characterized by nuclear magnetic resonance spectroscopy

scientific article published on 01 April 1999

Latest approaches for efficient protein production in drug discovery

scientific article

Linker region of a halobacterial transducer protein interacts directly with its sensor retinal protein

scientific article published in April 2005

NMR spectroscopic analyses of functional nucleic acids-metal interaction and their solution structure analyses.

scientific article published on January 2005

NMR spectroscopic investigations of the roles of the metal ion at A9/G10.1 site in hammerhead ribozymes

scientific article published on 01 January 2003

NMR structural analysis of the G.G mismatch DNA complexed with naphthyridine-dimer

scientific article published on 01 January 2005

NMR structural study of DNA oligomers containing alkylene crosslinked cyclic 2'-deoxyuridylate dimers

scientific article

NMR studies of DNA recognition mechanism of HMGB1 protein

scientific article published in January 2009

NMR studies of HAC1 mRNA

scientific article published on 01 January 2009

Nature of the chemical bond formed with the structural metal ion at the A9/G10.1 motif derived from hammerhead ribozymes

scientific article published in January 2004

New sequential-assignment routes of nucleic acid NMR signals using a [5'-(13)C]-labeled DNA dodecamer

scientific article published on 01 January 2004

Non-covalent forces tune the electron transfer complex between ferredoxin and sulfite reductase to optimize enzymatic activity ⬇️

scientific article

Nuclear magnetic resonance study of complexes between CRP and its 22- and 28-base-pair operators.

scientific article published on February 1995

Paramagnetic NMR study of Cu(2+)-IDA complex localization on a protein surface and its application to elucidate long distance information

scientific article

Physicochemical nature of interfaces controlling ferredoxin NADP(+) reductase activity through its interprotein interactions with ferredoxin

scientific article published on 16 June 2015

Precise analyses of DNA structure by NMR

scientific article published on 01 January 1993

Preparations of hammerhead ribozymes for investigations of their cleavable sequences

scientific article published in January 2009

Protein 19F-labeling using transglutaminase for the NMR study of intermolecular interactions.

scientific article published on 29 July 2017

Purification, crystallization and preliminary X-ray crystallographic analysis of a rice Rac/Rop GTPase, OsRac1.

scientific article published on 24 December 2013

Quantitative measurement of transverse and longitudinal cross-correlation between 13C-1H dipolar interaction and 13C chemical shift anisotropy: application to a 13C-labeled DNA duplex

scientific article published in February 1999

Regulation of rice NADPH oxidase by binding of Rac GTPase to its N-terminal extension

scientific article published on 21 December 2007

Simple suppression of spurious peaks in TROSY experiments

scientific article published on 01 April 2000

Site-specific isotope labeling of long RNA for structural and mechanistic studies.

scientific article

Slow motion in the CAA*TTG sequence of a DNA decamer duplex studied by NMR.

scientific article published in June 2001

Small-molecule ligand induces nucleotide flipping in (CAG)n trinucleotide repeats

scientific article published on 24 May 2005

Solid-phase synthesis of selectively labeled DNA: applications for multidimensional nuclear magnetic resonance spectroscopy.

scientific article

Solution NMR structure and inhibitory effect against amyloid-β fibrillation of Humanin containing a d-isomerized serine residue

scientific article

Solution NMR study of DNA recognition mechanism of IRF4 protein

scientific article published on 01 January 2004

Solution Strucutres of DNA duplexes containing a DNA x RNA hybrid region, d(GG)r(AGAU)d(GAC) x d(GTCATCTCC) and d(GGAGA)r(UGAC) x d(GTCATCTCC)

scientific article

Solution structure of a small-molecular ligand complexed with CAG trinucleotide repeat DNA.

scientific article published in January 2005

Solution structure of the cytoplasmic region of Na+/H+ exchanger 1 complexed with essential cofactor calcineurin B homologous protein 1.

scientific article

Solution structure of the peptidoglycan binding domain of Bacillus subtilis cell wall lytic enzyme CwlC: characterization of the sporulation-related repeats by NMR.

scientific article published in August 2005

Spectroscopic analyses of DNA duplexes in the presence of mercury ions

scientific article published on 01 January 2005

Stereospecific assignment of H5' and H5″ in a (5'R)-/(5'S)-deuterium- labeled DNA decamer for(3) J (HH) determination and unambiguous NOE assignments

scientific article published in January 1998

Structural analyses on the mercuryII-mediated T-T base pair

scientific article published on 01 January 2006

Structural analysis of the phototactic transducer protein HtrII linker region from Natronomonas pharaonis

scientific article

Structural and physicochemical features on the metal-mediated base pairs

scientific article published in January 2007

Structural effect of complete [Rp]-phosphorothioate and phosphorodithioate substitutions in the DNA strand of a model antisense inhibitor-target RNA complex

scientific article published in January 1999

Structural feature of bent DNA recognized by HMGB1

scientific article

Structure Determination of an Ag(I) -Mediated Cytosine-Cytosine Base Pair within DNA Duplex in Solution with (1) H/(15) N/(109) Ag NMR Spectroscopy

scientific article

Structure analyses of DNA oligomers by use of heteronuclear 2D NMR ⬇️

scientific article published on January 1, 1991

Structure and function of florigen and the receptor complex.

scientific article published on 13 March 2013

Structure model and physicochemical properties of the C-U mismatch pair in the double stranded RNA in solution.

scientific article

Structure of the N-terminal Regulatory Domain of a Plant NADPH Oxidase and Its Functional Implications

scientific article

Structure of the Ubiquitin-interacting Motif of S5a Bound to the Ubiquitin-like Domain of HR23B ⬇️

scientific article published on October 29, 2003

Studies of DNA recognition mechanism of transcription factor IRF-4.

scientific article

Studies of physicochemical properties of N-H...N hydrogen bonds in DNA, using selective 15N-labeling and direct 15N 1D NMR

scientific article published on 01 November 2000

Sugar conformation of a stereospecific 2'-R or 2'-S deuterium-labeled DNA decamer studied with proton-proton J coupling constants

scientific article published in January 2001

Synthesis of 5-substituted [N3-15N]-pyrimidine nucleosides: Developing model systems for NMR studies of substituent effects on the N-H...N hydrogen bond in duplex DNA

scientific article published on 01 January 2001

The crystal structure of the plant small GTPase OsRac1 reveals its mode of binding to NADPH oxidase.

scientific article

The structure of metallo-DNA with consecutive thymine-HgII-thymine base pairs explains positive entropy for the metallo base pair formation

scientific article

Utilization of lysine ¹³C-methylation NMR for protein-protein interaction studies

scientific article published on 06 December 2012

Utilization of paramagnetic relaxation enhancements for high-resolution NMR structure determination of a soluble loop-rich protein with sparse NOE distance restraints

scientific article

[Regulation mechanism of Na+/H+ exchanger]

scientific article published on 01 October 2008

[Structure and function of membrane, rafts, and their associated proteins]

scientific article published on 01 October 2001

pCold-GST vector: a novel cold-shock vector containing GST tag for soluble protein production

scientific article

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