List of works - Konstantinos D Tsirigos

A Brief History of Protein Sorting Prediction

scientific article published on 01 June 2019

A guideline to proteome-wide α-helical membrane protein topology predictions

scientific article

Combined prediction of Tat and Sec signal peptides with hidden Markov models

scientific article published on 16 September 2010

Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat

scientific article

ExTopoDB: a database of experimentally derived topological models of transmembrane proteins

article

Improved topology prediction using the terminal hydrophobic helices rule

scientific article published on 07 December 2015

Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins

scientific article published on 21 January 2016

Large tilts in transmembrane helices can be induced during tertiary structure formation.

scientific article published on 30 April 2014

OMPdb: a database of {beta}-barrel outer membrane proteins from Gram-negative bacteria

scientific article

PRED-TMBB2: improved topology prediction and detection of beta-barrel outer membrane proteins

scientific article

Prediction of cell wall sorting signals in gram-positive bacteria with a hidden markov model: application to complete genomes.

scientific article published in April 2008

Prediction of lipoprotein signal peptides in Gram-positive bacteria with a Hidden Markov Model

scientific article

Prediction of signal peptides in archaea

scientific article

Semi-supervised learning of Hidden Markov Models for biological sequence analysis

scientific article published on 01 July 2019

SignalP 5.0 improves signal peptide predictions using deep neural networks

scientific article published on 18 February 2019

The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides

scientific article published on 12 May 2015

List of works by Konstantinos D Tsirigos

A Brief History of Protein Sorting Prediction

A guideline to proteome-wide α-helical membrane protein topology predictions

Combined prediction of Tat and Sec signal peptides with hidden Markov models

Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat

ExTopoDB: a database of experimentally derived topological models of transmembrane proteins

Improved topology prediction using the terminal hydrophobic helices rule

Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins

Large tilts in transmembrane helices can be induced during tertiary structure formation.

OMPdb: a database of {beta}-barrel outer membrane proteins from Gram-negative bacteria

PRED-TMBB2: improved topology prediction and detection of beta-barrel outer membrane proteins

Prediction of cell wall sorting signals in gram-positive bacteria with a hidden markov model: application to complete genomes.

Prediction of lipoprotein signal peptides in Gram-positive bacteria with a Hidden Markov Model

Prediction of signal peptides in archaea

Semi-supervised learning of Hidden Markov Models for biological sequence analysis

SignalP 5.0 improves signal peptide predictions using deep neural networks

The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides