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List of works by Cecilia S. Lindestam Arlehamn

A Cytokine-Independent Approach To Identify Antigen-Specific Human Germinal Center T Follicular Helper Cells and Rare Antigen-Specific CD4+ T Cells in Blood.

scientific article published on 24 June 2016

A High Throughput Whole Blood Assay for Analysis of Multiple Antigen-Specific T Cell Responses in Human Mycobacterium tuberculosis Infection.

scientific article published on 14 March 2018

A Mycobacterium tuberculosis-specific subunit vaccine that provides synergistic immunity upon co-administration with Bacillus Calmette-Guérin

scientific article published on 18 November 2021

A Quantitative Analysis of Complexity of Human Pathogen-Specific CD4 T Cell Responses in Healthy M. tuberculosis Infected South Africans

scientific article

A Review on T Cell Epitopes Identified Using Prediction and Cell-Mediated Immune Models for Mycobacterium tuberculosis and Bordetella pertussis

scientific article published on 29 November 2018

A population response analysis approach to assign class II HLA-epitope restrictions

scientific article

A side-by-side comparison of T cell reactivity to fifty-nine Mycobacterium tuberculosis antigens in diverse populations from five continents

scientific article

A strategy to determine HLA class II restriction broadly covering the DR, DP, and DQ allelic variants most commonly expressed in the general population

scientific article published on 8 February 2013

An Integrated Workflow To Assess Technical and Biological Variability of Cell Population Frequencies in Human Peripheral Blood by Flow Cytometry

scientific article published on 9 January 2017

An open-source computational and data resource to analyze digital maps of immunopeptidomes

scientific article

Anti-HIV potency of T-cell responses elicited by dendritic cell therapeutic vaccination

scientific article published on 09 September 2019

Antigen Availability Shapes T Cell Differentiation and Function during Tuberculosis

scientific article published on June 2017

Antigens for CD4 and CD8 T cells in tuberculosis

scientific article published on 22 May 2014

Autoimmunity in Parkinson's Disease: The Role of α-Synuclein-Specific T Cells

scholarly article by Francesca Garretti et al published 25 February 2019 in Frontiers in Immunology

Automatic Generation of Validated Specific Epitope Sets

scientific article

Brucella melitensis T cell epitope recognition in humans with brucellosis in Peru

scientific article published on 14 October 2013

Can we predict tuberculosis cure? What tools are available?

scientific article published on 08 November 2018

Characterization of Proinsulin T Cell Epitopes Restricted by Type 1 Diabetes-Associated HLA Class II Molecules

scientific article published on 30 March 2020

Circulating T cell-monocyte complexes are markers of immune perturbations.

scientific article

Correction: Definition of Human Epitopes Recognized in Tetanus Toxoid and Development of an Assay Strategy to Detect Ex Vivo Tetanus CD4+ T Cell Responses.

scientific article published on 20 February 2018

Correction: Quantitative and Qualitative Perturbations of CD8+ MAITs in Healthy Mycobacterium tuberculosis-Infected Individuals

scientific article published on 22 July 2020

DAFi: A Directed Recursive Filtering and Clustering Approach to Data-Driven Identification of Cell Populations from Polychromatic Flow Cytometry Data

DAFi: A directed recursive data filtering and clustering approach for improving and interpreting data clustering identification of cell populations from polychromatic flow cytometry data

scientific article published on 17 April 2018

Definition of CD4 Immunosignatures Associated with MTB.

scientific article published on 24 March 2014

Definition of Human Epitopes Recognized in Tetanus Toxoid and Development of an Assay Strategy to Detect Ex Vivo Tetanus CD4+ T Cell Responses

scientific article

Development and validation of a broad scheme for prediction of HLA class II restricted T cell epitopes

scientific article published on 7 April 2015

Differential Recognition of Mycobacterium tuberculosis-Specific Epitopes as a Function of Tuberculosis Disease History

scientific article

Disease extent and anti-tubercular treatment response correlates with Mycobacterium tuberculosis-specific CD4 T-cell phenotype regardless of HIV-1 status

scientific article published on 28 September 2020

Disruption of an antimycobacterial circuit between dendritic and helper T cells in human SPPL2a deficiency

scientific article published on 20 August 2018

Dissecting mechanisms of immunodominance to the common tuberculosis antigens ESAT-6, CFP10, Rv2031c (hspX), Rv2654c (TB7.7), and Rv1038c (EsxJ)

scientific article

Erratum: T cells from patients with Parkinson's disease recognize α-synuclein peptides

scientific article published in September 2017

Evidence that recurrent Group A streptococcus tonsillitis is an immunosusceptibility disease involving antibody deficiency and aberrant Tfh cells

Experimental validation of the RATE tool for inferring HLA restrictions of T cell epitopes

scientific article

Expression and regulation of the Escherichia coli O157:H7 effector proteins NleH1 and NleH2

scientific article (publication date: 2012)

Functional Analysis of Immune Signature Genes in Th1* Memory Cells Links ISOC1 and Pyrimidine Metabolism to IFN-γ and IL-17 Production

scientific article published in 2021

HIV Interferes with Mycobacterium tuberculosis Antigen Presentation in Human Dendritic Cells

scientific article published on 13 October 2016

HLA-DR Marks Recently Divided Antigen-Specific Effector CD4 T Cells in Active Tuberculosis Patients

publication published on 30 June 2021

Host Transcriptomics as a Tool to Identify Diagnostic and Mechanistic Immune Signatures of Tuberculosis

scholarly article by Julie G Burel et al published 19 February 2019 in Frontiers in Immunology

Host resistance to pulmonary Mycobacterium tuberculosis infection requires CD153 expression

scientific article published on 10 September 2018

Human CD8⁺ and CD4⁺ T cell memory to lymphocytic choriomeningitis virus infection

scientific article published on 7 September 2011

Human IFN-γ immunity to mycobacteria is governed by both IL-12 and IL-23

scientific article published on 01 December 2018

Human circulating PD-1+CXCR3-CXCR5+ memory Tfh cells are highly functional and correlate with broadly neutralizing HIV antibody responses

scientific article published on 12 September 2013

IMMUNODEFICIENCIES. Impairment of immunity to Candida and Mycobacterium in humans with bi-allelic RORC mutations

scientific article

Identification of Mycobacterial Ribosomal Proteins as Targets for CD4 T Cells That Enhance Protective Immunity in Tuberculosis

scholarly article published by Alessandro Sette in 2018

Identification of Mycobacterial RplJ/L10 and RpsA/S1 Proteins as Novel Targets for CD4+ T Cells

scientific article published on 23 January 2017

Identifying specificity groups in the T cell receptor repertoire

scientific article published on 21 June 2017

Immunological consequences of intragenus conservation of Mycobacterium tuberculosis T-cell epitopes

scientific article

Inflammation in Experimental Models of α-Synucleinopathies

scientific article published on 03 October 2020

Is mapping the BCG vaccine-induced immune responses the key to improving the efficacy against tuberculosis?

scientific article published on 19 November 2020

Lack of evidence for BCG vaccine protection from severe COVID-19

scientific article published on 29 September 2020

Large Scale Epitope Identification Screen and Its Potential Application to the Study of Alopecia Areata

scientific article published on 29 August 2017

Large-Scale Epitope Identification Screen and Its Potential Application to the Study of Alopecia Areata

scientific article published in January 2018

Limited Pulmonary Mucosal-Associated Invariant T Cell Accumulation and Activation during Mycobacterium tuberculosis Infection in Rhesus Macaques

scientific article published on 20 November 2018

Limited recognition of Mycobacterium tuberculosis-infected macrophages by polyclonal CD4 and CD8 T cells from the lungs of infected mice

scientific article published on 21 October 2019

Limited recognition ofMycobacterium tuberculosis-infected macrophages by polyclonal CD4 and CD8 T cells from the lungs of infected mice

scientific article

Memory T cells in latent Mycobacterium tuberculosis infection are directed against three antigenic islands and largely contained in a CXCR3+CCR6+ Th1 subset

scientific article

Microbiota epitope similarity either dampens or enhances the immunogenicity of disease-associated antigenic epitopes.

scientific article

Mycobacterium tuberculosis-specific CD4 T cells expressing CD153 inversely associate with bacterial load and disease severity in human tuberculosis

scientific article published on 16 July 2020

Nontuberculous Mycobacteria and Heterologous Immunity to Tuberculosis

scientific article published on 01 August 2019

Previously undescribed grass pollen antigens are the major inducers of T helper 2 cytokine-producing T cells in allergic individuals

scientific article published on 11 February 2013

Proteome-Wide Zika Virus CD4 T Cell Epitope and HLA Restriction Determination

scientific article published on 04 August 2020

Pseudomonas aeruginosa pilin activates the inflammasome

scientific article

Quantitative and Qualitative Perturbations of CD8+ MAITs in Healthy Mycobacterium tuberculosis-Infected Individuals

scientific article published on 04 June 2020

Recurrent group A Streptococcus tonsillitis is an immunosusceptibility disease involving antibody deficiency and aberrant TFH cells.

scientific article published in February 2019

Roles for the adaptive immune system in Parkinson's and Alzheimer's diseases

scientific article published on 17 August 2019

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 100 Luo infants from the Boro area of Nyanza Province, Kenya

scientific article published on 15 March 2017

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 159 individuals from the Worcester region of the Western Cape province of South Africa

scientific article published on 2 February 2018

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 339 adults from Managua, Nicaragua

scientific article published on 6 November 2017

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 496 adults from San Diego, California, USA

scientific article published on 29 September 2018

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 714 adults from Colombo, Sri Lanka

scientific article published on 28 December 2017

T Cell Responses to Neural Autoantigens Are Similar in Alzheimer's Disease Patients and Age-Matched Healthy Controls

scientific article published on 27 August 2020

T cells from patients with Parkinson's disease recognize α-synuclein peptides

scientific article

Th1 versus Th2 T cell polarization by whole-cell and acellular childhood pertussis vaccines persists upon re-immunization in adolescence and adulthood

scientific article published on 14 May 2016

The Challenge of Distinguishing Cell-Cell Complexes from Singlet Cells in Non-Imaging Flow Cytometry and Single-Cell Sorting

scientific article published on 13 May 2020

The SysteMHC Atlas project

scientific article published on 29 July 2017

The TB-specific CD4(+) T cell immune repertoire in both cynomolgus and rhesus macaques largely overlap with humans

scientific article published on 28 August 2015

The role of potassium in inflammasome activation by bacteria

scientific article

Tissue-resident-like CD4+ T cells secreting IL-17 control Mycobacterium tuberculosis in the human lung

scientific article published on 13 April 2021

Transcriptional analysis of peripheral memory T cells reveals Parkinson's disease-specific gene signatures

scientific article published on 21 March 2022

Transcriptional profile of tuberculosis antigen-specific T cells reveals novel multifunctional features

scientific article

Transcriptomic Analysis of CD4+ T Cells Reveals Novel Immune Signatures of Latent Tuberculosis

scientific article published on 30 March 2018

Transient Immune Activation in BCG-Vaccinated Infant Rhesus Macaques Is Not Sufficient to Influence Oral Simian Immunodeficiency Virus Infection

scientific article published on 12 October 2019

Widespread Tau-Specific CD4 T Cell Reactivity in the General Population

scientific article published on 13 May 2019

α-Synuclein-specific T cell reactivity is associated with preclinical and early Parkinson's disease

scientific article published on 20 April 2020

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