List of works - Keith Boroevich

A combination of targeted enrichment methodologies for whole-exome sequencing reveals novel pathogenic mutations

scientific article

A comparison of machine learning classifiers for dementia with Lewy bodies using miRNA expression data

scientific article published on 30 October 2019

A novel genetic syndrome with STARD9 mutation and abnormal spindle morphology.

scientific article published on 4 August 2017

A novel homozygous missense mutation in the SH3-binding motif of STAMBP causing microcephaly-capillary malformation syndrome

A practical method to detect SNVs and indels from whole genome and exome sequencing data

scientific article

An integrative machine learning approach for prediction of toxicity-related drug safety

article

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

scientific article published on 05 February 2020

Arete - candidate gene prioritization using biological network topology with additional evidence types

scientific article published on 6 July 2017

Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome

scientific article

Comparative genomics identifies candidate genes for infectious salmon anemia (ISA) resistance in Atlantic salmon (Salmo salar)

scientific article

DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture

scientific article published on 06 August 2019

Functional genomics of the cilium, a sensory organelle

scientific journal article

Gene expression profiling of DBA/2J mice cochleae treated with l-methionine and valproic acid

scientific article

Genomic organization and evolution of the Atlantic salmon hemoglobin repertoire

scientific article (publication date: 5 October 2010)

Hierarchical Maximum Likelihood Clustering Approach

scientific article

IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.

scientific article published on 4 April 2018

Immune subtypes and neoantigen-related immune evasion in advanced colorectal cancer

scientific article published on 06 January 2022

Integrated analysis of whole genome and transcriptome sequencing reveals diverse transcriptomic aberrations driven by somatic genomic changes in liver cancers

scientific article

Mutations in a member of the Ras superfamily of small GTP-binding proteins causes Bardet-Biedl syndrome

scientific article

Performance comparison of four commercial human whole-exome capture platforms

scientific article published on 3 August 2015

Piecing together a ciliome

scientific article published on 24 July 2006

Quantification of multicellular colonization in tumor metastasis using exome-sequencing data

scientific article published on 15 February 2020

Risk prediction models for dementia constructed by supervised principal component analysis using miRNA expression data

scientific article published on 25 February 2019

Stepwise iterative maximum likelihood clustering approach

scientific article

Structural Basis and Genotype-Phenotype Correlations of INSR Mutations Causing Severe Insulin Resistance.

scientific article

Systematic analysis of mutation distribution in three dimensional protein structures identifies cancer driver genes

scientific article

The construction of risk prediction models using GWAS data and its application to a type 2 diabetes prospective cohort

scientific article

The prediction models for postoperative overall survival and disease-free survival in patients with breast cancer

scientific article

Whole genome sequencing discriminates hepatocellular carcinoma with intrahepatic metastasis from multi-centric tumors

scientific article

Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer.

scientific article published on 11 April 2016

Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity

scientific article published on 30 January 2015

Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

article

Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators

scientific article

List of works by Keith Boroevich

A combination of targeted enrichment methodologies for whole-exome sequencing reveals novel pathogenic mutations

A comparison of machine learning classifiers for dementia with Lewy bodies using miRNA expression data

A novel genetic syndrome with STARD9 mutation and abnormal spindle morphology.

A novel homozygous missense mutation in the SH3-binding motif of STAMBP causing microcephaly-capillary malformation syndrome

A practical method to detect SNVs and indels from whole genome and exome sequencing data

An integrative machine learning approach for prediction of toxicity-related drug safety

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

Arete - candidate gene prioritization using biological network topology with additional evidence types

Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome

Comparative genomics identifies candidate genes for infectious salmon anemia (ISA) resistance in Atlantic salmon (Salmo salar)

DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture

Functional genomics of the cilium, a sensory organelle

Gene expression profiling of DBA/2J mice cochleae treated with l-methionine and valproic acid

Genomic organization and evolution of the Atlantic salmon hemoglobin repertoire

Hierarchical Maximum Likelihood Clustering Approach

IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.

Immune subtypes and neoantigen-related immune evasion in advanced colorectal cancer

Integrated analysis of whole genome and transcriptome sequencing reveals diverse transcriptomic aberrations driven by somatic genomic changes in liver cancers

Mutations in a member of the Ras superfamily of small GTP-binding proteins causes Bardet-Biedl syndrome

Performance comparison of four commercial human whole-exome capture platforms

Piecing together a ciliome

Quantification of multicellular colonization in tumor metastasis using exome-sequencing data

Risk prediction models for dementia constructed by supervised principal component analysis using miRNA expression data

Stepwise iterative maximum likelihood clustering approach

Structural Basis and Genotype-Phenotype Correlations of INSR Mutations Causing Severe Insulin Resistance.

Systematic analysis of mutation distribution in three dimensional protein structures identifies cancer driver genes

The construction of risk prediction models using GWAS data and its application to a type 2 diabetes prospective cohort

The prediction models for postoperative overall survival and disease-free survival in patients with breast cancer

Whole genome sequencing discriminates hepatocellular carcinoma with intrahepatic metastasis from multi-centric tumors

Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer.

Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity

Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators