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List of works by Ramneek Gupta

A genome-wide association study identifies CDHR3 as a susceptibility locus for early childhood asthma with severe exacerbations

scientific article

A genome-wide association study of men with symptoms of testicular dysgenesis syndrome and its network biology interpretation

scientific article published on 3 December 2011

A low-gluten diet induces changes in the intestinal microbiome of healthy Danish adults

scientific article published in Nature Communications

An Aboriginal Australian genome reveals separate human dispersals into Asia

scientific article (publication date: 7 October 2011)

Analysis and prediction of leucine-rich nuclear export signals

scientific article (publication date: June 2004)

Ancient human genome sequence of an extinct Palaeo-Eskimo

scientific article

Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysis

scientific article

Cost-effective multiplexing before capture allows screening of 25 000 clinically relevant SNPs in childhood acute lymphoblastic leukemia

Discovery of biomarkers for glycaemic deterioration before and after the onset of type 2 diabetes: rationale and design of the epidemiological studies within the IMI DIRECT Consortium

scientific article

Genome-wide analysis of cytogenetic aberrations in ETV6/RUNX1-positive childhood acute lymphoblastic leukaemia

article

HExpoChem: a systems biology resource to explore human exposure to chemicals

scientific article published on 11 March 2013

Heterozygous deletion at the RLN1 locus in a family with testicular germ cell cancer identified by integrating copy number variation data with phenome and interactome information

scientific article published on 22 June 2011

Host genome variations and risk of infections during induction treatment for childhood acute lymphoblastic leukaemia

scientific article published on 28 January 2014

In silico determination of intracellular glycosylation and phosphorylation sites in human selectins: implications for biological function

scientific article published in April 2007

Meta-analysis of five genome-wide association studies identifies multiple new loci associated with testicular germ cell tumor. ⬇️

scientific article

Meta-analysis of genome-wide association studies identifies ten loci influencing allergic sensitization

scientific article

NESbase version 1.0: a database of nuclear export signals

scientific article

Nationwide germline whole genome sequencing of 198 consecutive pediatric cancer patients reveals a high frequency of cancer prone syndromes

scientific article published on 17 December 2020

Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios ⬇️

scientific article

Plasmodium falciparum merozoite surface protein 1.

scientific article published in January 2003

Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology

scientific article published on 12 April 2013

Predicting and elucidating the etiology of fatty liver disease: A machine learning modeling and validation study in the IMI DIRECT cohorts

scientific article published on 19 June 2020

Prediction of Human Protein Function from Post-translational Modifications and Localization Features

scientific article (publication date: June 2002)

Prediction of Nephrotoxicity Associated With Cisplatin-Based Chemotherapy in Testicular Cancer Patients

scientific article published on 23 April 2020

Prediction of disease causing non-synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP.

scientific article

Prediction of human protein function according to Gene Ontology categories

scientific article (publication date: 22 March 2003)

Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites

scientific article (publication date: February 2005)

Protein annotation in the era of personal genomics

scientific article (publication date: June 2010)

Ranking factors involved in diabetes remission after bariatric surgery using machine-learning integrating clinical and genomic biomarkers

scientific article published on 26 October 2016

Scanning the available Dictyostelium discoideum proteome for O-linked GlcNAc glycosylation sites using neural networks.

scientific article published in October 1999

Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

scientific article published in Nature

TIMP-1 Increases Expression and Phosphorylation of Proteins Associated with Drug Resistance in Breast Cancer Cells

scientific article (publication date: 6 September 2013)

TIMP1 overexpression mediates resistance of MCF-7 human breast cancer cells to fulvestrant and down-regulates progesterone receptor expression.

scientific article

The genome of a Late Pleistocene human from a Clovis burial site in western Montana

scientific article

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