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List of works by Kenta Shirasawa

A chromosome-level genome sequence of Chrysanthemum seticuspe, a model species for hexaploid cultivated chrysanthemum

scientific article published on 07 October 2021

A high-density SNP genetic map consisting of a complete set of homologous groups in autohexaploid sweetpotato (Ipomoea batatas).

scientific article published on 10 March 2017

A novel tomato mutant, Solanum lycopersicum elongated fruit1 (Slelf1), exhibits an elongated fruit shape caused by increased cell layers in the proximal region of the ovary

scientific article published on 12 February 2014

A reference genetic linkage map of apomictic Hieracium species based on expressed markers derived from developing ovule transcripts

scientific article

A simulation-based breeding design that uses whole-genome prediction in tomato

scientific article published on 20 January 2016

Accumulation of glycinebetaine in rice plants that overexpress choline monooxygenase from spinach and evaluation of their tolerance to abiotic stress

scientific article published on 21 June 2006

An EST-SSR linkage map of Raphanus sativus and comparative genomics of the Brassicaceae

scientific article

An interspecific linkage map of SSR and intronic polymorphism markers in tomato

scientific article

Analysis of the lineage of Phytophthora infestans isolates using mating type assay, traditional markers, and next generation sequencing technologies

scientific article published on 21 January 2020

Analytical workflow of double-digest restriction site-associated DNA sequencing based on empirical and in silico optimization in tomato

scientific article published on 29 February 2016

Availability of Micro-Tom mutant library combined with TILLING in molecular breeding of tomato fruit shelf-life

scientific article

Bayesian QTL mapping using genome-wide SSR markers and segregating population derived from a cross of two commercial F1 hybrids of tomato.

scientific article published on 5 May 2017

CURLED LATER1 encoding the largest subunit of the Elongator complex has a unique role in leaf development and meristem function in rice

scientific article published on 11 July 2020

Challenges to genome sequence dissection in sweetpotato.

scientific article

Characterization of active miniature inverted-repeat transposable elements in the peanut genome

scientific article

Climate Clever Clovers: New Paradigm to Reduce the Environmental Footprint of Ruminants by Breeding Low Methanogenic Forages Utilizing Haplotype Variation

scientific article published on 5 September 2017

Comparative Genetic Mapping and Discovery of Linkage Disequilibrium Across Linkage Groups in White Clover (Trifolium repens L.).

scientific article

Construction of an integrated high density simple sequence repeat linkage map in cultivated strawberry (Fragaria × ananassa) and its applicability

scientific article published on 17 December 2012

Corrigendum: Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.).

scientific article

Current status in whole genome sequencing and analysis of Ipomoea spp

scientific article published on 29 August 2019

DNA marker applications to molecular genetics and genomics in tomato.

scientific article

De novo whole-genome assembly in Chrysanthemum seticuspe, a model species of Chrysanthemums, and its application to genetic and gene discovery analysis.

scientific article published on 27 January 2019

Detection of genome donor species of neglected tetraploid crop Vigna reflexo-pilosa (créole bean), and genetic structure of diploid species based on newly developed EST-SSR markers from azuki bean (Vigna angularis)

scientific article

Development of Capsicum EST-SSR markers for species identification and in silico mapping onto the tomato genome sequence.

scientific article published on 11 August 2012

Development of EST-SSR markers and construction of a linkage map in faba bean (Vicia faba).

scientific article

Development of High-Density Genetic Linkage Maps and Identification of Loci for Chestnut Gall Wasp Resistance in Castanea spp

scientific article published on 18 August 2020

Development of NILs from heterogeneous inbred families for validating the rust resistance QTL in peanut (Arachis hypogaeaL.)

scientific article published on 6 December 2013

Development of gene-based markers and construction of an integrated linkage map in eggplant by using Solanum orthologous (SOL) gene sets.

scientific article

Development of molecular markers associated with resistance to Meloidogyne incognita by performing quantitative trait locus analysis and genome-wide association study in sweetpotato

scientific article published on 01 October 2019

Discrimination of candidate subgenome-specific loci by linkage map construction with an S1 population of octoploid strawberry (Fragaria × ananassa)

scientific article

Dissection of the octoploid strawberry genome by deep sequencing of the genomes of Fragaria species

scientific article

Dot-blot-SNP analysis for practical plant breeding and cultivar identification in rice

scientific article published on 27 April 2006

Draft genome sequence of eggplant (Solanum melongena L.): the representative solanum species indigenous to the old world

scientific article

Draft genome sequence of subterranean clover, a reference for genus Trifolium

scientific article published on 22 August 2016

Draft sequences of the radish (Raphanus sativus L.) genome

scientific article

Four genetic loci control compact plant size with yellow pear-shaped fruit in ornamental tomato (Solanum lycopersicum L.).

scientific article published on 11 April 2020

Genetic basis of lineage-specific evolution of fruit traits in hexaploid persimmon

scientific article published in 2023

Genome-wide SNP genotyping to infer the effects on gene functions in tomato.

scientific article published on 12 March 2013

Genome-wide association studies using single nucleotide polymorphism markers developed by re-sequencing of the genomes of cultivated tomato.

scientific article published on 31 July 2013

Genome-wide association study overcomes the genome complexity in autohexaploid chrysanthemum and tags SNP markers onto the flower color genes

scientific article published on 26 September 2019

Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea

scientific article published in 2014

Genome-wide survey of artificial mutations induced by ethyl methanesulfonate and gamma rays in tomato.

scientific article published on 16 February 2015

Genomic insight into the developmental history of southern highbush blueberry populations

scientific article published on 01 September 2020

Identification of QTLs for Rust Resistance in the Peanut Wild Species Arachis magna and the Development of KASP Markers for Marker-Assisted Selection

scientific article published on 5 May 2015

Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.).

scientific article published on 25 January 2017

Identification of the carotenoid modifying gene PALE YELLOW PETAL 1 as an essential factor in xanthophyll esterification and yellow flower pigmentation in tomato (Solanum lycopersicum).

scientific article published on 2 July 2014

In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut

scientific article

Integrated consensus map of cultivated peanut and wild relatives reveals structures of the A and B genomes of Arachis and divergence of the legume genomes

scientific article published on 12 January 2013

Kazusa Marker DataBase: a database for genomics, genetics, and molecular breeding in plants

scientific article published on September 2014

Large-scale development of expressed sequence tag-derived simple sequence repeat markers and diversity analysis in Arachis spp ⬇️

scientific article published on June 24, 2011

Mapping of Micro-Tom BAC-End Sequences to the Reference Tomato Genome Reveals Possible Genome Rearrangements and Polymorphisms ⬇️

scientific article published on November 27, 2012

Mapping of important taxonomic and productivity traits using genic and non-genic transposable element markers in peanut (Arachis hypogaea L.).

scientific article published on 17 October 2017

Marker-assisted breeding of a LOX-3-null rice line with improved storability and resistance to preharvest sprouting

scientific article published on 28 April 2015

Novel QTLs for photoperiodic flowering revealed by using reciprocal backcross inbred lines from crosses between japonica rice cultivars

scientific article published on 26 August 2008

Phased genome sequence of an interspecific hybrid flowering cherry, 'Somei-Yoshino' (Cerasus × yedoensis)

scientific article published on 01 October 2019

Rapid identification of candidate genes for resistance to tomato late blight disease using next-generation sequencing technologies

scientific article published on 18 December 2017

Root-knot nematode genetic diversity associated with host compatibility to sweetpotato cultivars

scientific article published on 17 June 2020

SNP discovery and linkage map construction in cultivated tomato.

scientific article

SNP discovery of Korean short day onion inbred lines using double digest restriction site-associated DNA sequencing

scientific article published in PLoS ONE

SSR and EST-SSR-based genetic linkage map of cassava (Manihot esculenta Crantz).

scientific article

Sequence analysis of cultivated strawberry (Fragaria × ananassa Duch.) using microdissected single somatic chromosomes.

scientific article published on 30 October 2017

Sequence analysis of the genome of carnation (Dianthus caryophyllus L.).

scientific article

Single nucleotide polymorphisms in randomly selected genes among japonica rice (Oryza sativa L.) varieties identified by PCR-RF-SSCP

scientific article published on 01 August 2004

Strategies to assess genetic diversity for crop breeding

scientific article published in 2023

Survey of genome sequences in a wild sweet potato, Ipomoea trifida (H. B. K.) G. Don.

scientific article

Target Amplicon Sequencing for Genotyping Genome-Wide Single Nucleotide Polymorphisms Identified by Whole-Genome Resequencing in Peanut.

scientific article published on November 2016

Tetrasomic recombination is surprisingly frequent in allotetraploid Arachis.

scientific article

The Ficus erecta genome aids Ceratocystis canker resistance breeding in common fig (F. carica)

scientific article published on 24 January 2020

The genome sequence of segmental allotetraploid peanut Arachis hypogaea

scientific article published on 01 May 2019

The genome sequence of sweet cherry (Prunus avium) for use in genomics-assisted breeding

scientific article published on 25 May 2017

The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut

scientific article

The number of genes having different alleles between rice cultivars estimated by SNP analysis.

scientific article published on 6 September 2007

The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants

scientific article published on 18 February 2020

The tomato genome sequence provides insights into fleshy fruit evolution

scientific article

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