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List of works by Rachael Huntley

A guide to best practices for Gene Ontology (GO) manual annotation.

scientific article published on 09 July 2013

A method for increasing expressivity of Gene Ontology annotations using a compositional approach

scientific article

An expanded evaluation of protein function prediction methods shows an improvement in accuracy ⬇️

scientific article

Annotation Extensions

scientific article published on January 2017

Annotation of gene product function from high-throughput studies using the Gene Ontology

article

Cytokinin activation of Arabidopsis cell division through a D-type cyclin

scientific article published in March 1999

Cytokinins and gibberellins in sap exudate of the oil palm

scientific article

D-type cyclins activate division in the root apex to promote seed germination in Arabidopsis

scientific article

Dissecting regulatory pathways of G1/S control in Arabidopsis: common and distinct targets of CYCD3;1, E2Fa and E2Fc.

scientific article

Expanding the horizons of microRNA bioinformatics

scientific article published on 05 June 2018

Fundamentals of Gene Ontology Functional Annotation

scientific article published on 7 July 2010

GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes

scientific article published in Nature Communications

Gene Ontology Consortium: going forward

scientific article (publication date: 2015)

Gene Ontology Curation of Neuroinflammation Biology Improves the Interpretation of Alzheimer's Disease Gene Expression Data

scientific article published on 13 May 2020

Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort

scientific article published on 27 August 2013

Gene Ontology annotations and resources

scientific article

Gene regulation knowledge commons: community action takes care of DNA binding transcription factors

scientific article

Guidelines for the functional annotation of microRNAs using the Gene Ontology.

scientific article published on 25 February 2016

Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology

scientific article published in February 2018

Improving the Gene Ontology Resource to Facilitate More Informative Analysis and Interpretation of Alzheimer’s Disease Data

article

IntAct--open source resource for molecular interaction data

scientific article (publication date: 2007)

MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data

scientific article

MicroRNA Biomarkers and Platelet Reactivity: The Clot Thickens

scientific article published on January 2017

Ongoing and future developments at the Universal Protein Resource

scientific article

Practical Applications of the Gene Ontology Resource

article

QuickGO: a user tutorial for the web-based Gene Ontology browser

scientific article published on 29 September 2009

QuickGO: a web-based tool for Gene Ontology searching

scientific article published on 10 September 2009

RNAcentral: a hub of information for non-coding RNA sequences

scientific article published on 5 November 2018

RNAcentral: a hub of information for non-coding RNA sequences

scholarly article published in Nucleic Acids Research

Reorganizing the protein space at the Universal Protein Resource (UniProt)

scientific article (publication date: 2012)

Representing kidney development using the gene ontology

scientific article

Standardized description of scientific evidence using the Evidence Ontology (ECO)

scientific article

Synthesis and confirmation of structure for a new gibberellin, 2β-hydroxy-GA12 (GA110), from spinach and oil palm

scientific article published on 01 February 1998

The GOA database in 2009--an integrated Gene Ontology Annotation resource

scientific article

The GOA database: gene Ontology annotation updates for 2015

scientific article

The Gene Ontology - Providing a Functional Role in Proteomic Studies

article

The Gene Ontology Annotation (GOA) Database

article

The Gene Ontology Annotation (GOA) Database

The Gene Ontology of eukaryotic cilia and flagella

scientific article published on 16 November 2017

The Renal Gene Ontology Annotation Initiative

scientific article

The UniProt-GO Annotation database in 2011.

scientific article published on 28 November 2011

The impact of focused Gene Ontology curation of specific mammalian systems

scientific article

The maize retinoblastoma protein homologue ZmRb-1 is regulated during leaf development and displays conserved interactions with G1/S regulators and plant cyclin D (CycD) proteins.

scientific article published in May 1998

Understanding how and why the Gene Ontology and its annotations evolve: the GO within UniProt.

scientific article published on 18 March 2014

Use of Gene Ontology Annotation to understand the peroxisome proteome in humans

scientific article published on 17 January 2013

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