List of works - Takatoshi Arakawa

Author Correction: Identification and characterization of a novel β-D-galactosidase that releases pyruvylated galactose

scientific article published on 13 February 2020

Biochemical and structural analyses of a bacterial endo-β-1,2-glucanase reveal a new glycoside hydrolase family

scientific article published on 7 March 2017

Characterization and crystal structure determination of β-1,2-mannobiose phosphorylase from Listeria innocua

scientific article

Crystal Structure and Substrate Recognition of Cellobionic Acid Phosphorylase, Which Plays a Key Role in Oxidative Cellulose Degradation by Microbes

scientific article published on 3 June 2015

Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic β-glucosidase Td2F2

scientific article

Crystal structure of a feruloyl esterase belonging to the tannase family: A disulfide bond near a catalytic triad

article

Crystal structure of a symmetric football-shaped GroEL:GroES2-ATP14 complex determined at 3.8Å reveals rearrangement between two GroEL rings

scientific article

Crystal structure of glycoside hydrolase family 127 β-l-arabinofuranosidase from Bifidobacterium longum

scientific article

Crystal structure of the anion exchanger domain of human erythrocyte band 3

scientific article

Crystal structure of β-L-arabinobiosidase belonging to glycoside hydrolase family 121

scientific article published on 01 June 2020

Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii

scientific article published on 13 September 2016

Discovery of α-L-arabinopyranosidases from human gut microbiome expands the diversity within glycoside hydrolase family 42.

scientific article published on 23 October 2017

Functional expression of thiocyanate hydrolase is promoted by its activator protein, P15K.

scientific article

G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody

scientific article

Gaining insight into the catalysis by GH20 lacto-N-biosidase using small molecule inhibitors and structural analysis

scientific article

Identification and characterization of a novel β-D-galactosidase that releases pyruvylated galactose

scientific article published in Scientific Reports

Identification, functional characterization, and crystal structure determination of bacterial levoglucosan dehydrogenase

scientific article published in Journal of Biological Chemistry

Isolation and characterization of a thermostable lipase from Bacillus thermoamylovorans NB501.

scientific article published on 22 November 2016

Kinetics and binding sites for interaction of the prefoldin with a group II chaperonin: contiguous non-native substrate and chaperonin binding sites in the archaeal prefoldin.

scientific article

Ligand complex structures of l-amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 and its conformational change.

scientific article published on 8 February 2018

Liprin-α controls stress fiber formation by binding to mDia and regulating its membrane localization

scientific article

Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum.

scientific article published on 4 April 2017

Molecular analysis of cyclic α-maltosyl-(1→6)-maltose binding protein in the bacterial metabolic pathway

scientific article published on 19 November 2020

Open-close structural change upon ligand binding and two magnesium ions required for the catalysis of N-acetylhexosamine 1-kinase

scientific article

Proteoliposome-based selection of a recombinant antibody fragment against the human M2 muscarinic acetylcholine receptor

scientific article published on December 2014

Structural analysis of β-L-arabinobiose-binding protein in the metabolic pathway of hydroxyproline-rich glycoproteins in Bifidobacterium longum

scientific article published on 04 April 2020

Structural and thermodynamic insights into β-1,2-glucooligosaccharide capture by a solute-binding protein in Listeria innocua.

scientific article

Structural basis for broad substrate specificity of UDP-glucose 4-epimerase in the human milk oligosaccharide catabolic pathway of Bifidobacterium longum

scientific article published on 31 July 2019

Structural basis for catalytic activation of thiocyanate hydrolase involving metal-ligated cysteine modification

scientific article

Structural basis for the 4'-hydroxylation of diclofenac by a microbial cytochrome P450 monooxygenase

scientific article

Structural basis for the specific cleavage of core-fucosylated N-glycans by endo-β-N-acetylglucosaminidase from the fungus Cordyceps militaris

scientific article published on 23 September 2019

Structural features of a bacterial cyclic α-maltosyl-(1→6)-maltose (CMM) hydrolase critical for CMM recognition and hydrolysis

scientific article published in Journal of Biological Chemistry

Structure and mechanism of the mammalian fructose transporter GLUT5

scientific article

Structure and molecular dynamics simulation of archaeal prefoldin: the molecular mechanism for binding and recognition of nonnative substrate proteins

scientific article

Structure of aspartate racemase complexed with a dual substrate analogue, citric acid, and implications for the reaction mechanism

scientific article

Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center

scientific article

Structures of the 5-HT2A receptor in complex with the antipsychotics risperidone and zotepine

scientific article published on 04 February 2019

The first crystal structure of a family 129 glycoside hydrolase from a probiotic bacterium reveals critical residues and metal cofactors

scientific article published on 25 May 2017

Two arginine residues in the substrate pocket predominantly control the substrate selectivity of thiocyanate hydrolase

scientific article published in March 2013

Understanding the Molecular Mechanism Underlying the High Catalytic Activity of p-Hydroxybenzoate Hydroxylase Mutants for Producing Gallic Acid

scientific article published on 01 November 2019

List of works by Takatoshi Arakawa

Author Correction: Identification and characterization of a novel β-D-galactosidase that releases pyruvylated galactose

Biochemical and structural analyses of a bacterial endo-β-1,2-glucanase reveal a new glycoside hydrolase family

Characterization and crystal structure determination of β-1,2-mannobiose phosphorylase from Listeria innocua

Crystal Structure and Substrate Recognition of Cellobionic Acid Phosphorylase, Which Plays a Key Role in Oxidative Cellulose Degradation by Microbes

Crystal structure and identification of a key amino acid for glucose tolerance, substrate specificity, and transglycosylation activity of metagenomic β-glucosidase Td2F2

Crystal structure of a feruloyl esterase belonging to the tannase family: A disulfide bond near a catalytic triad

Crystal structure of a symmetric football-shaped GroEL:GroES2-ATP14 complex determined at 3.8Å reveals rearrangement between two GroEL rings

Crystal structure of glycoside hydrolase family 127 β-l-arabinofuranosidase from Bifidobacterium longum

Crystal structure of the anion exchanger domain of human erythrocyte band 3

Crystal structure of β-L-arabinobiosidase belonging to glycoside hydrolase family 121

Crystal structures of archaeal 2-oxoacid:ferredoxin oxidoreductases from Sulfolobus tokodaii

Discovery of α-L-arabinopyranosidases from human gut microbiome expands the diversity within glycoside hydrolase family 42.

Functional expression of thiocyanate hydrolase is promoted by its activator protein, P15K.

G-protein-coupled receptor inactivation by an allosteric inverse-agonist antibody

Gaining insight into the catalysis by GH20 lacto-N-biosidase using small molecule inhibitors and structural analysis

Identification and characterization of a novel β-D-galactosidase that releases pyruvylated galactose

Identification, functional characterization, and crystal structure determination of bacterial levoglucosan dehydrogenase

Isolation and characterization of a thermostable lipase from Bacillus thermoamylovorans NB501.

Kinetics and binding sites for interaction of the prefoldin with a group II chaperonin: contiguous non-native substrate and chaperonin binding sites in the archaeal prefoldin.

Ligand complex structures of l-amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 and its conformational change.

Liprin-α controls stress fiber formation by binding to mDia and regulating its membrane localization

Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum.

Molecular analysis of cyclic α-maltosyl-(1→6)-maltose binding protein in the bacterial metabolic pathway

Open-close structural change upon ligand binding and two magnesium ions required for the catalysis of N-acetylhexosamine 1-kinase

Proteoliposome-based selection of a recombinant antibody fragment against the human M2 muscarinic acetylcholine receptor

Structural analysis of β-L-arabinobiose-binding protein in the metabolic pathway of hydroxyproline-rich glycoproteins in Bifidobacterium longum

Structural and thermodynamic insights into β-1,2-glucooligosaccharide capture by a solute-binding protein in Listeria innocua.

Structural basis for broad substrate specificity of UDP-glucose 4-epimerase in the human milk oligosaccharide catabolic pathway of Bifidobacterium longum

Structural basis for catalytic activation of thiocyanate hydrolase involving metal-ligated cysteine modification

Structural basis for the 4'-hydroxylation of diclofenac by a microbial cytochrome P450 monooxygenase

Structural basis for the specific cleavage of core-fucosylated N-glycans by endo-β-N-acetylglucosaminidase from the fungus Cordyceps militaris

Structural features of a bacterial cyclic α-maltosyl-(1→6)-maltose (CMM) hydrolase critical for CMM recognition and hydrolysis

Structure and mechanism of the mammalian fructose transporter GLUT5

Structure and molecular dynamics simulation of archaeal prefoldin: the molecular mechanism for binding and recognition of nonnative substrate proteins

Structure of aspartate racemase complexed with a dual substrate analogue, citric acid, and implications for the reaction mechanism

Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center

Structures of the 5-HT2A receptor in complex with the antipsychotics risperidone and zotepine

The first crystal structure of a family 129 glycoside hydrolase from a probiotic bacterium reveals critical residues and metal cofactors

Two arginine residues in the substrate pocket predominantly control the substrate selectivity of thiocyanate hydrolase

Understanding the Molecular Mechanism Underlying the High Catalytic Activity of p-Hydroxybenzoate Hydroxylase Mutants for Producing Gallic Acid