List of works by Janaki Amin

A new method for assessing how sensitivity and specificity of linkage studies affects estimation

scientific article

A novel assay detecting recall response to Mycobacterium tuberculosis: Comparison with existing assays

scientific article published on 26 April 2012

A prospective study of hepatitis C incidence in Australian prisoners

scientific article published on 15 July 2014

A randomized trial of combination hepatitis B therapy in HIV/HBV coinfected antiretroviral naïve individuals in Thailand

scientific article published in October 2008

A randomized, double-blind study of gemfibrozil for the treatment of protease inhibitor-associated hypertriglyceridaemia

scientific article published in November 2002

Abacavir does not affect circulating levels of inflammatory or coagulopathic biomarkers in suppressed HIV: a randomized clinical trial

scientific article published on November 2010

Activation of NK cells by ADCC antibodies and HIV disease progression

scientific article

Adherence to response-guided pegylated interferon and ribavirin for people who inject drugs with hepatitis C virus genotype 2/3 infection: the ACTIVATE study

scientific article

Adherence to sofosbuvir and velpatasvir among people with chronic HCV infection and recent injection drug use: The SIMPLIFY study

Alanine aminotransferase, HCV RNA levels and pro-inflammatory and pro-fibrogenic cytokines/chemokines during acute hepatitis C virus infection

scientific article published on 24 February 2016

Anti-HIV-1 ADCC Antibodies following Latency Reversal and Treatment Interruption.

scientific article published on 24 May 2017

Are Parent-Held Child Health Records a Valuable Health Intervention? A Systematic Review and Meta-Analysis

article

Atazanavir trough plasma concentration monitoring in a cohort of HIV-1-positive individuals receiving highly active antiretroviral therapy

scientific article published on 4 July 2005

Baseline HIV-1 resistance, virological outcomes, and emergent resistance in the SECOND-LINE trial: an exploratory analysis.

scientific article published on 20 January 2015

Body composition and metabolic outcomes after 96 weeks of treatment with ritonavir-boosted lopinavir plus either nucleoside or nucleotide reverse transcriptase inhibitors or raltegravir in patients with HIV with virological failure of a standard fir

scientific article published in November 2016

Bone mineral density over 96 weeks in adults failing first-line therapy randomized to raltegravir/lopinavir/ritonavir compared with standard second-line therapy

scientific article published in October 2014

Botulinum injection for the management of myofascial pain in the masticatory muscles. A prospective outcome study

scientific article published on 4 August 2012

Cancer incidence in people with hepatitis B or C infection: A large community-based linkage study

article

Causes of death after diagnosis of hepatitis B or hepatitis C infection: a large community-based linkage study

scientific article published on September 2006

Causes of death in hepatitis B and C: a methodological issue

scientific article published in The Lancet

Cerebrospinal fluid exposure of efavirenz and its major metabolites when dosed at 400 mg and 600 mg once daily: a randomized controlled trial

scientific article published on 11 December 2014

Changes in bone turnover and bone loss in HIV-infected patients changing treatment to tenofovir-emtricitabine or abacavir-lamivudine

scientific article (publication date: 2012)

Changes in hematologic parameters and efficacy of thymidine analogue-based, highly active antiretroviral therapy: a meta-analysis of six prospective, randomized, comparative studies

scientific article published in January 2004

Changes in metabolic, inflammatory and coagulation biomarkers after HIV seroconversion – the Health In Men (HIM) Biomarker sub-study

article

Changes in risk behaviours during and following treatment for hepatitis C virus infection among people who inject drugs: The ACTIVATE study

scientific article published on 17 June 2017

Characterization of transcription factor phenotypes within antigen-specific CD4+ T cells using qualitative multiplex single-cell RT-PCR

scientific article published on 4 October 2013

Chronic hepatitis C burden and care cascade in Australia in the era of interferon-based treatment

scientific article published on 19 May 2016

Clearance of hepatitis C virus after newly acquired infection in injection drug users

scientific article published on 18 August 2004

Cohort profile: the TREAT Asia pediatric HIV observational database

scientific article

Combined analysis of two-year follow-up from two open-label randomized trials comparing efficacy of three nucleoside reverse transcriptase inhibitor backbones for previously untreated HIV-1 infection: OzCombo 1 and 2.

scientific article published in July 2003

Comparison of Dried Blood Spots Versus Conventional Plasma Collection for the Characterization of Efavirenz Pharmacokinetics in a Large-Scale Global Clinical Trial-The ENCORE1 Study

scientific article published on 22 September 2017

Comparison of central and local HIV-1 RNA quantification from two international clinical trials

scientific article published on October 2014

Comprehensive Pharmacokinetic, Pharmacodynamic and Pharmacogenetic Evaluation of Once-Daily Efavirenz 400 and 600 mg in Treatment-Naïve HIV-Infected Patients at 96 Weeks: Results of the ENCORE1 Study

scientific article published on 29 December 2015

Correction: Raltegravir Non-Inferior to Nucleoside Based Regimens in SECOND-LINE Therapy with Lopinavir/Ritonavir over 96 Weeks: A Randomised Open Label Study for the Treatment Of HIV-1 Infection

scientific article published on 9 October 2015

Corrigendum to “The impact of blood-borne viruses on cause-specific mortality among opioid dependent people: An Australian population-based cohort study” [Drug Alcohol Depend. 152C (2015) 264–271]

article

Cutaneous melanoma is related to immune suppression in kidney transplant recipients.

scientific article published on 21 July 2009

Declining hepatitis C virus-related liver disease burden in the direct-acting antiviral therapy era in New South Wales, Australia

article

Dental foundation year 2 training in oral and maxillofacial surgery units - the trainees' perspective

scientific article published on 11 July 2012

Differences in lipid measurements by antiretroviral regimen exposure in cohorts from Asia and australia

scientific article

Dynamics of HCV RNA levels during acute hepatitis C virus infection

scientific article

Early antiretroviral therapy with raltegravir generates sustained reductions in HIV reservoirs but not lower T-cell activation levels

scientific article published on May 2015

Economic evaluation of the direct healthcare cost savings resulting from the use of walking interventions to prevent coronary heart disease in Australia.

scientific article published in November 2009

Effect of Combination Antiretroviral Therapy on HIV-1-specific Antibody-Dependent Cellular Cytotoxicity Responses in Subtype B- and Subtype C-Infected Cohorts

scientific article published on 23 March 2017

Effect of reduced immunosuppression after kidney transplant failure on risk of cancer: population based retrospective cohort study

scientific article

Efficacy and safety of contemporary dual-drug antiretroviral regimens as first-line treatment or as a simplification strategy: a systematic review and meta-analysis

scientific article published on 31 May 2016

Efficacy and safety of efavirenz 400 mg daily versus 600 mg daily: 96-week data from the randomised, double-blind, placebo-controlled, non-inferiority ENCORE1 study

scientific article published on 12 April 2015

Efficacy and tolerability of initial antiretroviral therapy: a systematic review

scientific article published on January 2009

Efficacy of initial antiretroviral therapy for HIV-1 infection in adults: a systematic review and meta-analysis of 114 studies with up to 144 weeks' follow-up

scientific article

Efficacy of response-guided directly observed pegylated interferon and self-administered ribavirin for people who inject drugs with hepatitis C virus genotype 2/3 infection: The ACTIVATE study

scientific article published on 14 June 2017

Enfuvirtide in HIV-1-infected individuals changing therapy to a nucleoside reverse transcriptase inhibitor sparing regimen: the ALLIANCE Study

article

Estimates and projections of hepatitis B-related hepatocellular carcinoma in Australia among people born in Asia-Pacific countries

scientific article published on July 2007

Evaluation of a Hepatitis C Virus Core Antigen Assay in Plasma and Dried Blood Spot Samples

scientific article published on 26 June 2018

Evaluation of the Xpert HCV Viral Load point-of-care assay from venepuncture-collected and finger-stick capillary whole-blood samples: a cohort study

scientific article published on 21 April 2017

Evaluation of the Xpert® HCV Viral Load Fingerstick point-of-care assay.

scientific article published on 9 March 2018

Examining the quality of name code record linkage: what is the impact on death and cancer risk estimates? A validation study

article

Expanded HIV pre-exposure prophylaxis (PrEP) implementation in communities in New South Wales, Australia (EPIC-NSW): design of an open label, single arm implementation trial

scientific article

Factors associated with hepatitis C virus RNA levels in early chronic infection: the InC3 study

scientific article published on 8 January 2015

HIV and hepatitis C coinfection within the CAESAR study

scientific article

HIV infection is associated with higher levels of monocyte chemoattractant protein-1 and eotaxin among people with recent hepatitis C virus infection

scientific article

HIV-1 Env- and Vpu-Specific Antibody-Dependent Cellular Cytotoxicity Responses Associated with Elite Control of HIV.

scientific article published on 12 July 2017

HLA alleles association with changes in bone mineral density in HIV-1-infected adults changing treatment to tenofovir-emtricitabine or abacavir-lamivudine

scientific article

Hepatitis A epidemiology in Australia: national seroprevalence and notifications

scientific article published in April 2001

Hepatitis C treatment outcomes in Australian clinics

scientific article published on June 2012

Hepatitis C virus incidence among injecting drug users on opioid replacement therapy

scientific article

Hepatitis C virus prevalence and outcomes among injecting drug users on opioid replacement therapy

scientific article published in July 2005

Hepatocellular carcinoma risk following direct-acting antiviral HCV therapy: A systematic review, meta-analyses, and meta-regression

scientific article published on 9 August 2017

High HIV testing and low HIV prevalence among injecting drug users attending the Sydney Medically Supervised Injecting Centre

article

Hip structural parameters over 96 weeks in HIV-infected adults switching treatment to tenofovir-emtricitabine or abacavir-lamivudine

scientific article

Hospital-related morbidity in people notified with hepatitis C: a population-based record linkage study in New South Wales, Australia

scientific article published on 10 April 2010

Hospitalisation rates and associated factors in community-based cohorts of HIV-infected and -uninfected gay and bisexual men.

scientific article published on 6 September 2015

Hospitalization for Anxiety and Mood Disorders in HIV-Infected and -Uninfected Gay and Bisexual Men.

scientific article published on December 2016

Hospitalization rates associated with hepatitis B and HIV co-infection, age and sex in a population-based cohort of people diagnosed with hepatitis C.

scientific article published on 19 November 2010

Immunodeficiency and the risk of serious clinical endpoints in a well studied cohort of treated HIV-infected patients

scientific article

Immunosuppression and other risk factors for early and late non-Hodgkin lymphoma after kidney transplantation

scientific article published on 14 May 2009

Immunosuppression and other risk factors for lip cancer after kidney transplantation

scientific article

Inaccurate ascertainment of morbidity and mortality due to influenza in administrative databases: a population-based record linkage study

scientific article published on 29 May 2014

Incidence and time trends of anal cancer among people living with HIV in Australia

article

Integrated HIV DNA accumulates prior to treatment while episomal HIV DNA records ongoing transmission afterwards

scientific article published in March 2012

Intensification of antiretroviral therapy with raltegravir or addition of hyperimmune bovine colostrum in HIV-infected patients with suboptimal CD4+ T-cell response: a randomized controlled trial

scientific article published on 19 September 2011

Interferon lambda 3 genotype predicts hepatitis C virus RNA levels in early acute infection among people who inject drugs: the InC(3) study

scientific article

Is screening for sexually transmitted infections in men who have sex with men who receive non-occupational HIV post-exposure prophylaxis worthwhile?

scientific article published on February 2006

Lack of correlation between three commercial platforms for the evaluation of human immunodeficiency virus type 1 (HIV-1) viral load at the clinically critical lower limit of quantification.

scientific article

Life expectancy of HIV-positive people after starting combination antiretroviral therapy: a meta-analysis

scientific article published on 31 August 2016

Limited reporting of major harms in studies of initial combination antiretroviral therapy: a systematic review

scientific article published on May 2015

Lipid profiles in HIV-infected adults receiving atazanavir and atazanavir/ritonavir: systematic review and meta-analysis of randomized controlled trials

scientific article published on 16 June 2010

Liver cancer and hepatitis B and C in New South Wales, 1990-2002: a linkage study

scientific article

Long-term immunological outcomes in treated HIV-infected individuals in high-income and low-middle income countries

scientific article published on July 2011

Longitudinal injecting risk behaviours among people with a history of injecting drug use in an Australian prison setting: The HITS-p study

scientific article published on 20 January 2018

Lower life expectancy among people with an HCV notification: a population-based linkage study.

scientific article published on June 2014

Maraviroc, as a Switch Option, in HIV-1-infected Individuals With Stable, Well-controlled HIV Replication and R5-tropic Virus on Their First Nucleoside/Nucleotide Reverse Transcriptase Inhibitor Plus Ritonavir-boosted Protease Inhibitor Regimen: Wee

scientific article published on 5 April 2016

Measles vaccine, inflammatory bowel disease and pervasive developmental disorder: is there cause for concern?

scientific article published in April 1998

Measles-mumps-rubella immunisation, autism and inflammatory bowel disease: update

scientific article published in August 1999

Measurement of serum levels of macrophage inhibitory cytokine 1 combined with prostate-specific antigen improves prostate cancer diagnosis

scientific article published on January 2006

Minor changes in calculated creatinine clearance and anion-gap are associated with tenofovir disoproxil fumarate-containing highly active antiretroviral therapy

scientific article published in March 2006

Modelling and calibration of the hepatitis C epidemic in Australia.

scientific article

Monitoring Health and Well-Being in Emerging Adults: Protocol for a Pilot Longitudinal Cohort Study

scientific article published on 23 April 2020

Mortality in patients with hepatitis B or hepatitis C – Authors' reply

scientific article published in The Lancet

Mortality in well controlled HIV in the continuous antiretroviral therapy arms of the SMART and ESPRIT trials compared with the general population

scientific article

Mortality trends among people with hepatitis B and C: a population-based linkage study, 1993-2012.

scientific article

Ongoing incident hepatitis C virus infection among people with a history of injecting drug use in an Australian prison setting, 2005-2014: The HITS-p study.

scientific article

Opioid substitution therapy is associated with increased detection of hepatitis C virus infection: a 15-year observational cohort study

scientific article published on 05 January 2015

Patterns of Drug Use and Drug-related Hospital Admissions in HIV-Positive and -Negative Gay and Bisexual Men.

scientific article published on 2 February 2016

Patterns of hepatitis C virus RNA levels during acute infection: the InC3 study

scientific article

Pharmacokinetic and Pharmacodynamic Comparison of Once-Daily Efavirenz (400 mg vs. 600 mg) in Treatment-Naïve HIV-Infected Patients: Results of the ENCORE1 Study

scientific article published on 5 June 2015

Pharmacokinetics of plasma lopinavir/ritonavir following the administration of 400/100 mg, 200/150 mg and 200/50 mg twice daily in HIV-negative volunteers

scientific article published on 17 December 2010

Poor record linkage sensitivity biased outcomes in a linked cohort analysis

scientific article published on 30 January 2016

Population-level effectiveness of rapid, targeted, high-coverage roll-out of HIV pre-exposure prophylaxis in men who have sex with men: the EPIC-NSW prospective cohort study

Potential biases in estimates of hepatitis C RNA clearance in newly acquired hepatitis C infection among a cohort of injecting drug users

scientific article published on 17 May 2006

Predictors and survival in hepatitis B-related hepatocellular carcinoma in New South Wales, Australia

scientific article published on 21 October 2008

Predictors of completion of a hepatitis B vaccination schedule in attendees at a primary health care centre

scientific article published on March 2007

Predictors of deferral of treatment for hepatitis C infection in Australian clinics.

scientific article published on April 2011

Predictors of limb fat gain in HIV positive patients following a change to tenofovir-emtricitabine or abacavir-lamivudine

scientific article (publication date: 2011)

Prevalence and Disease Burden of HCV Coinfection in HIV Cohorts in the Asia Pacific Region: A Systematic Review and Meta-Analysis

scientific article

Productivity loss resulting from coronary heart disease in Australia

scientific article published in January 2010

Quantifying the dose-response of walking in reducing coronary heart disease risk: meta-analysis

scientific article published on 22 March 2009

Quantitative HBsAg and HBeAg predict hepatitis B seroconversion after initiation of HAART in HIV-HBV coinfected individuals

scientific article

Race and CD4+T-cell count in HIV prognosis and treatment

article

Raltegravir and unboosted atazanavir dual therapy in virologically suppressed antiretroviral treatment-experienced HIV patients

scientific article published on January 2010

Raltegravir non-inferior to nucleoside based regimens in second-line therapy with lopinavir/ritonavir over 96 weeks: a randomised open label study for the treatment of HIV-1 infection

scientific article published in 2015

Randomized, open-label, comparative trial to evaluate the efficacy and safety of three antiretroviral drug combinations including two nucleoside analogues and nevirapine for previously untreated HIV-1 Infection: the OzCombo 2 study

scientific article published in May 2002

Reclassification of risk of death with the knowledge of D-dimer in a cohort of treated HIV-infected individuals

scientific article

Relationship between untimed plasma lopinavir concentrations and virological outcome on second-line antiretroviral therapy

scientific article published in January 2018

Reply to Landmann and Soonawala

scientific article published in 2010

Reply to: "Direct antiviral agents and risk of HCC: Waiting for Godot".

scientific article published on 9 October 2017

Reversibility of lipoatrophy in HIV-infected patients 2 years after switching from a thymidine analogue to abacavir: the MITOX Extension Study

scientific article published on April 2004

Risk factors for hepatocellular carcinoma in a cohort infected with hepatitis B or C.

scientific article

Ross River virus infection in the north-west outskirts of the Sydney basin.

scientific article published in June 1998

Serum macrophage inhibitory cytokine-1 (MIC-1/GDF15): a potential screening tool for the prevention of colon cancer?

scientific article published on 5 December 2011

Sexual behaviour and human herpesvirus 8 infection in homosexual men in Australia.

scientific article published in January 2005

Short Communication: Nonnucleoside Reverse Transcriptase Inhibitor Fold Change or Plasma Concentration as a Predictor of Virological Response over 48 Weeks in Highly Treatment Experienced HIV-Positive Individuals

article

Simplification of antiretroviral therapy with tenofovir-emtricitabine or abacavir-Lamivudine: a randomized, 96-week trial

scientific article published in November 2009

Skeletal muscle toxicity associated with raltegravir-based combination antiretroviral therapy in HIV-infected adults

scientific article

Sofosbuvir and velpatasvir for hepatitis C virus infection in people with recent injection drug use (SIMPLIFY): an open-label, single-arm, phase 4, multicentre trial

scientific article published on 5 January 2018

Specific antibody-dependent cellular cytotoxicity responses associated with slow progression of HIV infection

scientific article published in February 2013

Survival after diagnosis of hepatocellular carcinoma and potential impact of treatment in a hepatitis B or C infected cohort

scientific article published on 20 May 2012

Switching virally suppressed, treatment-experienced patients to a raltegravir-containing regimen does not alter levels of HIV-1 DNA

scientific article (publication date: 2012)

The Clinical Significance of CD4 Counts in Asian and Caucasian HIV-Infected Populations: Results from TAHOD and AHOD

scientific article published on 20 April 2011

The Influence of Hepatitis C Virus Genetic Region on Phylogenetic Clustering Analysis

scientific article published on 20 July 2015

The contribution of alcohol use disorder to decompensated cirrhosis among people with hepatitis C: An international study

scientific article published on 26 October 2017

The effects of female sex, viral genotype, and IL28B genotype on spontaneous clearance of acute hepatitis C virus infection

scientific article

The impact of a supervised injecting facility on ambulance call-outs in Sydney, Australia

scientific article

The impact of blood-borne viruses on cause-specific mortality among opioid dependent people: An Australian population-based cohort study

scientific article published on 6 April 2015

The importance of blood-borne viruses in elevated cancer risk among opioid-dependent people: a population-based cohort study

scientific article

The influence of HLA supertype on thymidine analogue associated with low peripheral fat in HIV.

scientific article published in November 2012

The normalized inhibitory quotient of boosted protease inhibitors is predictive of viral load response in treatment-experienced HIV-1-infected individuals

scientific article published in September 2005

The pattern of excess cancer in dialysis and transplantation

scientific article published on 08 July 2009

The use of a triple nucleoside-nucleotide regimen for nonoccupational HIV post-exposure prophylaxis

scientific article published in May 2005

Time to decompensated cirrhosis and hepatocellular carcinoma after an HBV or HCV notification: A population-based study

scientific article published on 8 July 2016

Treatment efficacy of azithromycin 1 g single dose versus doxycycline 100 mg twice daily for 7 days for the treatment of rectal chlamydia among men who have sex with men - a double-blind randomised controlled trial protocol

scientific article

Trends in all cause and viral liver disease-related hospitalizations in people with hepatitis B or C: a population-based linkage study

scientific article

Trends in hepatocellular carcinoma among people with HBV or HCV notification in Australia (2000-2014).

scientific article

Trends in hepatocellular carcinoma incidence and survival among people with hepatitis C: an international comparison

scientific article published on 30 November 2017

Trends in incidence of hepatocellular carcinoma after diagnosis of hepatitis B or C infection: a population-based cohort study, 1992-2007

article

Trends in mortality after diagnosis of hepatitis B or C infection: 1992-2006.

scientific article

Trends in mortality after diagnosis of hepatitis C virus infection: an international comparison and implications for monitoring the population impact of treatment

scientific article published on 6 September 2014

Week 96 results of the randomized, multicentre Maraviroc Switch (MARCH) study

scientific article published on 13 July 2017

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