List of works - Brian Munsky

Bayesian Estimation for Stochastic Gene Expression Using Multifidelity Models

scientific article published on 05 March 2019

Computational design and interpretation of single-RNA translation experiments

scientific article published on 16 October 2019

Counting small RNA in pathogenic bacteria

scientific article

Distribution shapes govern the discovery of predictive models for gene regulation.

scientific article

Diverse Cell Stimulation Kinetics Identify Predictive Signal Transduction Models

scientific article published on 15 September 2020

Erratum: “Specificity and completion time distributions of biochemical processes” [J. Chem. Phys. 131, 235103 (2009)]

scholarly article published in Journal of Chemical Physics

From analog to digital models of gene regulation

scientific article

Identification from stochastic cell-to-cell variation: a genetic switch case study

scientific article published in November 2010

Identification of Gene regulation models from single-cell data

scientific article published on 6 April 2018

Integrating single-molecule experiments and discrete stochastic models to understand heterogeneous gene transcription dynamics

scientific article

Listening to the noise: random fluctuations reveal gene network parameters.

scientific article published on 13 October 2009

Live-cell imaging reveals the spatiotemporal organization of endogenous RNA polymerase II phosphorylation at a single gene

scientific article published on 26 May 2021

Machine learning to predict microbial community functions: An analysis of dissolved organic carbon from litter decomposition

scientific article published on 01 July 2019

Reduction and solution of the chemical master equation using time scale separation and finite state projection

scientific article published in November 2006

Ribozyme-based insulator parts buffer synthetic circuits from genetic context

scientific article

Special section dedicated to The Sixth q-bio Conference: meeting report and preface

scientific article published on 4 June 2013

Specificity and completion time distributions of biochemical processes

scientific article

Systematic identification of signal-activated stochastic gene regulation

scientific article

The Seventh q-bio Conference: meeting report and preface

scientific article published on 30 July 2014

The finite state projection algorithm for the solution of the chemical master equation

scientific article published in January 2006

The finite state projection based Fisher information matrix approach to estimate information and optimize single-cell experiments

article

The simplicity of completion time distributions for common complex biochemical processes

scientific article

Transient analysis of stochastic switches and trajectories with applications to gene regulatory networks

scientific article published in September 2008

Using flow cytometry and multistage machine learning to discover label-free signatures of algal lipid accumulation

scientific article published on 22 July 2019

Using gene expression noise to understand gene regulation

scientific article

Using noise to control heterogeneity of isogenic populations in homogenous environments.

scientific article published on 18 June 2015

List of works by Brian Munsky

Bayesian Estimation for Stochastic Gene Expression Using Multifidelity Models

Computational design and interpretation of single-RNA translation experiments

Counting small RNA in pathogenic bacteria

Distribution shapes govern the discovery of predictive models for gene regulation.

Diverse Cell Stimulation Kinetics Identify Predictive Signal Transduction Models

Erratum: “Specificity and completion time distributions of biochemical processes” [J. Chem. Phys. 131, 235103 (2009)]

From analog to digital models of gene regulation

Identification from stochastic cell-to-cell variation: a genetic switch case study

Identification of Gene regulation models from single-cell data

Integrating single-molecule experiments and discrete stochastic models to understand heterogeneous gene transcription dynamics

Listening to the noise: random fluctuations reveal gene network parameters.

Live-cell imaging reveals the spatiotemporal organization of endogenous RNA polymerase II phosphorylation at a single gene

Machine learning to predict microbial community functions: An analysis of dissolved organic carbon from litter decomposition

Reduction and solution of the chemical master equation using time scale separation and finite state projection

Ribozyme-based insulator parts buffer synthetic circuits from genetic context

Special section dedicated to The Sixth q-bio Conference: meeting report and preface

Specificity and completion time distributions of biochemical processes

Systematic identification of signal-activated stochastic gene regulation

The Seventh q-bio Conference: meeting report and preface

The finite state projection algorithm for the solution of the chemical master equation

The finite state projection based Fisher information matrix approach to estimate information and optimize single-cell experiments

The simplicity of completion time distributions for common complex biochemical processes

Transient analysis of stochastic switches and trajectories with applications to gene regulatory networks

Using flow cytometry and multistage machine learning to discover label-free signatures of algal lipid accumulation

Using gene expression noise to understand gene regulation

Using noise to control heterogeneity of isogenic populations in homogenous environments.