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List of works by Junpeng Zhang

A novel framework for inferring condition-specific TF and miRNA co-regulation of protein-protein interactions

scientific article published on 20 November 2015

Ensemble Methods for MiRNA Target Prediction from Expression Data

scientific article

From miRNA regulation to miRNA-TF co-regulation: computational approaches and challenges

scientific article published on 12 July 2014

Identifying direct miRNA-mRNA causal regulatory relationships in heterogeneous data

scientific article

Identifying miRNA sponge modules using biclustering and regulatory scores

scientific article

Identifying miRNA synergism using multiple-intervention causal inference

scientific article published on 27 December 2019

Identifying miRNA synergistic regulatory networks in heterogeneous human data via network motifs.

scientific article

Inferring and analyzing module-specific lncRNA-mRNA causal regulatory networks in human cancer

scientific article published in February 2018

Inferring condition-specific miRNA activity from matched miRNA and mRNA expression data

scientific article

Inferring functional miRNA-mRNA regulatory modules in epithelial-mesenchymal transition with a probabilistic topic model.

scientific article published on 15 January 2012

Inferring miRNA sponge co-regulation of protein-protein interactions in human breast cancer.

scientific article

LMSM: A modular approach for identifying lncRNA related miRNA sponge modules in breast cancer

scientific article published on 23 April 2020

LncmiRSRN: identification and analysis of long non-coding RNA related miRNA sponge regulatory network in human cancer

scientific article published on 01 December 2018

miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBase

miRLAB: An R Based Dry Lab for Exploring miRNA-mRNA Regulatory Relationships

scientific article published on 30 December 2015

miRspongeR: an R/Bioconductor package for the identification and analysis of miRNA sponge interaction networks and modules.

scientific article published on 10 May 2019

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