List of works - Kausik Chakraborty

Accurate Detection of Protein:Ligand Binding Sites Using Molecular Dynamics Simulations

article

Chaperonin-catalyzed rescue of kinetically trapped states in protein folding

scientific article

Characterization of gp120 and its single-chain derivatives, gp120-CD4D12 and gp120-M9: implications for targeting the CD4i epitope in human immunodeficiency virus vaccine design

scientific article

Chemical Chaperones Mitigate Experimental Asthma by Attenuating Endoplasmic Reticulum Stress

scientific article published on 01 May 2014

Chemical chaperones assist intracellular folding to buffer mutational variations.

scientific article published on 15 January 2012

Classification of chemical chaperones based on their effect on protein folding landscapes

scientific article published on 23 December 2014

Converging evidence of mitochondrial dysfunction in a yeast model of homocysteine metabolism imbalance

scientific article published on 19 April 2011

Cross-compartment proteostasis regulation during redox imbalance induced ER stress

scientific article published on 17 June 2014

Design of immunogens that present the crown of the HIV-1 V3 loop in a conformation competent to generate 447-52D-like antibodies

scientific article published on November 2006

Differential strengths of molecular determinants guide environment specific mutational fates.

scientific article

Distinct metabolic states of a cell guide alternate fates of mutational buffering through altered proteostasis

scientific article published on 10 June 2020

Essential role of the chaperonin folding compartment in vivo

scientific article

High resolution methylome map of rat indicates role of intragenic DNA methylation in identification of coding region

scientific article

How do eubacterial organisms manage aggregation-prone proteome?

scientific article published on 27 June 2014

Interaction of Mycobacterium tuberculosis elongation factor Tu with GTP is regulated by phosphorylation.

scientific article

Monitoring Protein Conformation along the Pathway of Chaperonin-Assisted Folding

NMR structural analysis of a peptide mimic of the bridging sheet of HIV-1 gp120 in methanol and water

scientific article

Ncl1-mediated metabolic rewiring critical during metabolic stress

scientific article published on 15 August 2019

Protein Stabilization by Introduction of Cross-Strand Disulfides†

scientific article published on 01 November 2005

Protein minimization of the gp120 binding region of human CD4.

scientific article

Proteomic profile of 4-PBA treated human neuronal cells during ER stress

article published in 2018

Selective inhibition of miR-21 by phage display screened peptide

scientific article published on 30 March 2015

List of works by Kausik Chakraborty

Accurate Detection of Protein:Ligand Binding Sites Using Molecular Dynamics Simulations

Chaperonin-catalyzed rescue of kinetically trapped states in protein folding

Characterization of gp120 and its single-chain derivatives, gp120-CD4D12 and gp120-M9: implications for targeting the CD4i epitope in human immunodeficiency virus vaccine design

Chemical Chaperones Mitigate Experimental Asthma by Attenuating Endoplasmic Reticulum Stress

Chemical chaperones assist intracellular folding to buffer mutational variations.

Classification of chemical chaperones based on their effect on protein folding landscapes

Converging evidence of mitochondrial dysfunction in a yeast model of homocysteine metabolism imbalance

Cross-compartment proteostasis regulation during redox imbalance induced ER stress

Design of immunogens that present the crown of the HIV-1 V3 loop in a conformation competent to generate 447-52D-like antibodies

Differential strengths of molecular determinants guide environment specific mutational fates.

Distinct metabolic states of a cell guide alternate fates of mutational buffering through altered proteostasis

Essential role of the chaperonin folding compartment in vivo

High resolution methylome map of rat indicates role of intragenic DNA methylation in identification of coding region

How do eubacterial organisms manage aggregation-prone proteome?

Interaction of Mycobacterium tuberculosis elongation factor Tu with GTP is regulated by phosphorylation.

Monitoring Protein Conformation along the Pathway of Chaperonin-Assisted Folding

NMR structural analysis of a peptide mimic of the bridging sheet of HIV-1 gp120 in methanol and water

Ncl1-mediated metabolic rewiring critical during metabolic stress

Protein Stabilization by Introduction of Cross-Strand Disulfides†

Protein minimization of the gp120 binding region of human CD4.

Proteomic profile of 4-PBA treated human neuronal cells during ER stress

Selective inhibition of miR-21 by phage display screened peptide

dms2dfe: Comprehensive Workflow for Analysis of Deep Mutational Scanning Data