List of works by John-Patrick Mpindi

A cell spot microarray method for production of high density siRNA transfection microarrays

scientific article

A community effort to assess and improve drug sensitivity prediction algorithms.

scientific article

A comprehensive panel of three-dimensional models for studies of prostate cancer growth, invasion and drug responses

scientific article

A functional genetic screen reveals new regulators of β1-integrin activity

scientific article

A novel transcript, VNN1-AB, as a biomarker for colorectal cancer

scientific article published on 29 March 2014

ARLTS1 and prostate cancer risk--analysis of expression and regulation

scientific article

Anagrelide for Gastrointestinal Stromal Tumor

scientific article published on 07 December 2018

Androgen receptor-interacting protein HSPBAP1 facilitates growth of prostate cancer cells in androgen-deficient conditions

scientific article

Arachidonic acid pathway members PLA2G7, HPGD, EPHX2, and CYP4F8 identified as putative novel therapeutic targets in prostate cancer

scientific article

Breeze: an integrated quality control and data analysis application for high-throughput drug screening

scientific article published on 02 March 2020

Clinical relevance of integrin alpha 4 in gastrointestinal stromal tumours.

scientific article

Comprehensive Drug Testing of Patient-derived Conditionally Reprogrammed Cells from Castration-resistant Prostate Cancer

scientific article

Comprehensive data-driven analysis of the impact of chemoinformatic structure on the genome-wide biological response profiles of cancer cells to 1159 drugs

scientific article

Consistency in drug response profiling

scientific article published in November 2016

Contribution of ARLTS1 Cys148Arg (T442C) variant with prostate cancer risk and ARLTS1 function in prostate cancer cells

scientific article

Correction: GTI: A Novel Algorithm for Identifying Outlier Gene Expression Profiles from Integrated Microarray Datasets

scientific article published in PLoS ONE

Correction: Plasticity of Blood- and Lymphatic Endothelial Cells and Marker Identification.

scientific article published on 15 October 2013

Differentiation status of primary chronic myeloid leukemia cells affects sensitivity to BCR-ABL1 inhibitors

scientific article

Drug sensitivity and resistance testing identifies PLK1 inhibitors and gemcitabine as potent drugs for malignant peripheral nerve sheath tumors

scientific article published on 29 May 2017

FZD4 as a mediator of ERG oncogene-induced WNT signaling and epithelial-to-mesenchymal transition in human prostate cancer cells.

scientific article published on 16 August 2010

GTI: a novel algorithm for identifying outlier gene expression profiles from integrated microarray datasets

scientific article

High-throughput 3D screening reveals differences in drug sensitivities between culture models of JIMT1 breast cancer cells

scientific article (publication date: 2013)

High-throughput RNAi screening for novel modulators of vimentin expression identifies MTHFD2 as a regulator of breast cancer cell migration and invasion

scientific article

High-throughput transcriptomic and RNAi analysis identifies AIM1, ERGIC1, TMED3 and TPX2 as potential drug targets in prostate cancer

scientific article

ITGB1-dependent upregulation of Caveolin-1 switches TGFβ signalling from tumour-suppressive to oncogenic in prostate cancer

scientific article

Impact of normalization methods on high-throughput screening data with high hit rates and drug testing with dose-response data

scientific article

Integrative genomic, transcriptomic, and RNAi analysis indicates a potential oncogenic role for FAM110B in castration-resistant prostate cancer

scientific article published on 14 September 2011

Plasticity of blood- and lymphatic endothelial cells and marker identification

scientific article (publication date: 2013)

REG4 Is Highly Expressed in Mucinous Ovarian Cancer: A Potential Novel Serum Biomarker

scientific article

Systematic Identification of MicroRNAs That Impact on Proliferation of Prostate Cancer Cells and Display Changed Expression in Tumor Tissue

scientific article published on 19 October 2015

Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues

scientific article published on 19 September 2008

Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer

scientific article

Systemic analysis of gene expression profiles identifies ErbB3 as a potential drug target in pediatric alveolar rhabdomyosarcoma

scientific article

The impact of low-frequency and rare variants on lipid levels

scientific article published on 11 May 2015

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