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List of works by Sten Linnarsson

A PBX1 transcriptional network controls dopaminergic neuron development and is impaired in Parkinson's disease

scientific article published on 28 June 2016

A cell fitness selection model for neuronal survival during development

scientific article published on 12 September 2019

A comparative atlas of single-cell chromatin accessibility in the human brain

scientific article published on 12 October 2023

A comparative strategy for single-nucleus and single-cell transcriptomes confirms accuracy in predicted cell-type expression from nuclear RNA.

scientific article published on 20 July 2017

A multimodal cell census and atlas of the mammalian primary motor cortex

scientific article

A secretagogin locus of the mammalian hypothalamus controls stress hormone release

scientific article

Alternative TSSs are co-regulated in single cells in the mouse brain

scientific article published on 11 May 2017

Amplification-free sequencing of cell-free DNA for prenatal non-invasive diagnosis of chromosomal aberrations

scientific article published on 24 December 2014

BDNF regulates reelin expression and Cajal-Retzius cell development in the cerebral cortex

scientific article published in August 1998

Base preferences in non-templated nucleotide incorporation by MMLV-derived reverse transcriptases

scientific article

Biological annotation of genetic loci associated with intelligence in a meta-analysis of 87,740 individuals.

scientific article published on 8 March 2018

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

scientific article published on 19 February 2015

Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos

scientific article published on 14 July 2016

Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq

scientific article

Classes and continua of hippocampal CA1 inhibitory neurons revealed by single-cell transcriptomics

scientific article published on 18 June 2018

Comparative cell cycle transcriptomics reveals synchronization of developmental transcription factor networks in cancer cells

scientific article published on 11 December 2017

Comparative cellular analysis of motor cortex in human, marmoset and mouse

scientific article published on 06 October 2021

Comparative transcriptomics reveals human-specific cortical features

scientific article published on 12 October 2023

Comprehensive cell atlas of the first-trimester developing human brain

scientific article published on 12 October 2023

Conserved properties of dentate gyrus neurogenesis across postnatal development revealed by single-cell RNA sequencing

scientific article published on 15 January 2018

Constitutively Active SMAD2/3 Are Broad-Scope Potentiators of Transcription-Factor-Mediated Cellular Reprogramming.

scientific article published on 13 November 2017

Correction: Highly Parallel Genome-Wide Expression Analysis of Single Mammalian Cells.

scientific article

Corrigendum: Characterization and target genes of nine human PRD-like homeobox domain genes expressed exclusively in early embryos

scientific article published on 2 September 2016

Counting absolute numbers of molecules using unique molecular identifiers

scientific article

Dependence of developing group Ia afferents on neurotrophin-3

Diversity of Interneurons in the Dorsal Striatum Revealed by Single-Cell RNA Sequencing and PatchSeq

scientific article published on 01 August 2018

Dynamics of Lgr6⁺ Progenitor Cells in the Hair Follicle, Sebaceous Gland, and Interfollicular Epidermis

scientific article

Effects of <i>In Vivo</i> Gluten Challenge on PBMC Gene Expression Profiles in Diet Treated Celiac Disease

scientific article published on 11 December 2020

En masse in vitro functional profiling of the axonal mechanosensitivity of sensory neurons

scientific article

Erg channel is critical in controlling cell volume during cell cycle in embryonic stem cells.

scientific article

Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

scientific article published in April 2020

Exome sequencing of primary breast cancers with paired metastatic lesions reveals metastasis-enriched mutations in the A-kinase anchoring protein family (AKAPs).

scientific article published on 12 February 2018

Functional consequences of genetic loci associated with intelligence in a meta-analysis of 87,740 individuals

GWAS meta-analysis (N=279,930) identifies new genes and functional links to intelligence

article

Gene expression analysis of skin grafts and cultured keratinocytes using synthetic RNA normalization reveals insights into differentiation and growth control

scientific article published on 25 June 2015

Genetic identification of brain cell types underlying schizophrenia

scientific article published on 21 May 2018

Genome-wide association meta-analysis in 269,867 individuals identifies new genetic and functional links to intelligence

article

HGG-06. EARLY GABAERGIC NEURONAL LINEAGE DEFINES DEPENDENCIES IN HISTONE H3 G34R/V GLIOMA

scientific article published in 2021

High-resolution analysis with novel cell-surface markers identifies routes to iPS cells ⬇️

scientific article published on June 2, 2013

High-throughput chromatin accessibility profiling at single-cell resolution

scientific article published in Nature Communications

Highly multiplexed and strand-specific single-cell RNA 5′ end sequencing ⬇️

scientific article published on April 5, 2012

Highly parallel genome-wide expression analysis of single mammalian cells

scientific article (publication date: 2012)

Induction of functional dopamine neurons from human astrocytes in vitro and mouse astrocytes in a Parkinson's disease model

scientific article

Integrated Bayesian analysis of rare exonic variants to identify risk genes for schizophrenia and neurodevelopmental disorders

scientific article published on 20 December 2017

Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes

scientific article

Learning deficit in BDNF mutant mice

scientific article published in December 1997

LifeTime and improving European healthcare through cell-based interceptive medicine

scientific article published on 07 September 2020

Magnetic sequencing ⬇️

scientific article published on March 27, 2012

Membrane-Depolarizing Channel Blockers Induce Selective Glioma Cell Death by Impairing Nutrient Transport and Unfolded Protein/Amino Acid Responses.

scientific article published on 13 January 2017

Meta-analysis of genome-wide association studies for neuroticism in 449,484 individuals identifies novel genetic loci and pathways

scientific article published on 25 June 2018

Modulation of Secretory Lysosomes During NK Cell Education Leads to Accumulation of Granzyme B and Enhanced Functional Potential

Molecular Architecture of the Mouse Nervous System

article by Amit Zeisel et al published 9 August 2018 in Cell

Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells

scientific article published on October 2016

Molecular analysis of the midbrain dopaminergic niche during neurogenesis

scholarly article published 26 June 2017

Molecular architecture of the developing mouse brain

scientific article

Molecular interrogation of hypothalamic organization reveals distinct dopamine neuronal subtypes

scientific article

Myelodysplastic Syndromes Are Propagated by Rare and Distinct Human Cancer Stem Cells In Vivo

Myelodysplastic Syndromes Are Propagated by Rare and Distinct Human Cancer Stem Cells In Vivo

Myelodysplastic syndromes are propagated by rare and distinct human cancer stem cells in vivo

scientific article published on 15 May 2014

NEUROSCIENCE. A tree of the human brain

scientific article published in October 2015

NOD-like receptor signaling and inflammasome-related pathways are highlighted in psoriatic epidermis

scientific article published on 15 March 2016

Neuronal atlas of the dorsal horn defines its architecture and links sensory input to transcriptional cell types

scientific article published on 23 April 2018

Novel PRD-like homeodomain transcription factors and retrotransposon elements in early human development

scientific article

Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system

scientific article published on June 2016

Origin, fate and dynamics of macrophages at central nervous system interfaces

scientific article

Population-scale testing can suppress the spread of COVID-19

scientific article published on 01 May 2020

Positional differences of axon growth rates between sensory neurons encoded by Runx3.

scientific article published on 17 August 2012

Prenatal and postnatal requirements of NT-3 for sympathetic neuroblast survival and innervation of specific targets

scientific article published in February 1996

Publisher Correction: LifeTime and improving European healthcare through cell-based interceptive medicine

scientific article published on 17 March 2021

Quantitative single-cell RNA-seq with unique molecular identifiers

scientific article

RNA velocity of single cells

scientific article published in Nature

RNA-Seq Analysis Reveals Different Dynamics of Differentiation of Human Dermis- and Adipose-Derived Stromal Stem Cells ⬇️

scientific article published on June 19, 2012

Rapid genome sequencing with short universal tiling probes

scientific article published on 25 May 2008

Recent advances in DNA sequencing methods - general principles of sample preparation

scientific article published on 06 March 2010

Remodeling of secretory lysosomes during education tunes functional potential in NK cells

scientific article published in Nature Communications

Reprogramming Roadblocks Are System Dependent

scientific article

Rewired metabolism in drug-resistant leukemia cells: a metabolic switch hallmarked by reduced dependence on exogenous glutamine

scientific article

SAMstrt: statistical test for differential expression in single-cell transcriptome with spike-in normalization

scientific article published on 31 August 2013

STRT-seq-2i: dual-index 5' single cell and nucleus RNA-seq on an addressable microwell array

scientific article published on 27 November 2017

Selective calcium sensitivity in immature glioma cancer stem cells

scientific article

Sequencing Single Cells Reveals Sequential Stem Cell States

scientific article published in September 2015

Single nucleus multi-omics identifies human cortical cell regulatory genome diversity

scientific article published in 2022

Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos

scientific article published on 5 April 2016

Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos

scientific article published on September 2016

Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle Heterogeneity

scientific article published on 14 September 2016

Single-cell DNA methylation and 3D genome architecture in the human brain

scientific article published on 12 October 2023

Single-cell biology meeting marks rebirth of an old science

scientific article published on 19 April 2013

Single-cell genomics: coming of age

scientific article published on 10 May 2016

Single-cell mRNA isoform diversity in the mouse brain

scientific article

Single-cell sequencing-based technologies will revolutionize whole-organism science ⬇️

scientific article published on July 30, 2013

Spatial organization of the somatosensory cortex revealed by osmFISH

scientific article published on 30 October 2018

Srebf1 Controls Midbrain Dopaminergic Neurogenesis

scientific article published on 01 May 2020

The Human Cell Atlas

scientific article

The Human Cell Atlas

The Human Cell Atlas White Paper ⬇️

journal article from 'arXiv:1810.05192 [q-bio]' published in 2018

The human PRD-like homeobox gene LEUTX has a central role in embryo genome activation

scientific article published on 30 August 2016

The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing.

scientific article

Topographical transcriptome mapping of the mouse medial ganglionic eminence by spatially resolved RNA-seq

scientific article published in January 2014

Transcriptomic cytoarchitecture reveals principles of human neocortex organization

scientific article published on 12 October 2023

Transcriptomic diversity of cell types across the adult human brain

scientific article published on 12 October 2023

Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing

scientific article published on 24 November 2014

Visceral motor neuron diversity delineates a cellular basis for nipple- and pilo-erection muscle control

scientific article published on 29 August 2016

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics

scientific article

Whole-genome expression profiling through fragment display and combinatorial gene identification

scientific article published on 08 September 2004

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