List of works by Samuel Chaffron

A global network of coexisting microbes from environmental and whole-genome sequence data

scientific article

Bacterial diversity and composition in the fluid of pitcher plants of the genus Nepenthes

scientific article published on 16 June 2015

Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

scientific article published on 04 September 2009

Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

article

Decline in plankton diversity and carbon flux with reduced sea ice extent along the Western Antarctic Peninsula

scientific article published on 16 August 2021

Eukaryotic virus composition can predict the efficiency of carbon export in the global ocean

scientific article published on 29 December 2020

First Viruses Infecting the Marine Diatom

scientific article published on 01 January 2018

Like will to like: abundances of closely related species can predict susceptibility to intestinal colonization by pathogenic and commensal bacteria

scientific article

Mechanically induced development and maturation of human intestinal organoids in vivo

article

Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice

scientific article published on 22 December 2011

Modelling plankton ecosystems in the meta-omics era. Are we ready?

scientific article

Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems

scientific article

Ocean plankton. Determinants of community structure in the global plankton interactome

scientific article published on May 2015

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean

scientific article published on May 2015

Ocean plankton. Patterns and ecological drivers of ocean viral communities

scientific article published on May 2015

Ocean plankton. Structure and function of the global ocean microbiome

scientific article published on May 2015

Plankton networks driving carbon export in the oligotrophic ocean

scientific article

Population-level analysis of gut microbiome variation

scientific article published on 28 April 2016

Population-level analysis ofBlastocystissubtype prevalence and variation in the human gut microbiota

scientific article published on 31 August 2018

STRING 7--recent developments in the integration and prediction of protein interactions

scientific article

STRING 8--a global view on proteins and their functional interactions in 630 organisms

scientific article

Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota

scientific article

Species-function relationships shape ecological properties of the human gut microbiome

scientific article published on 13 June 2016

Termites in the woodwork

scientific article (publication date: 2007)

The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea

scientific article (publication date: 2010)

The use of next generation sequencing for improving food safety: Translation into practice

scientific article published on 17 November 2018

Treponema peruense sp. nov., a commensal spirochaete isolated from human faeces

scientific article published on 21 October 2021

Paulina is supported by:

About Paulina

Help