List of works - Christine Brun

Approach of the functional evolution of duplicated genes in Saccharomyces cerevisiae using a new classification method based on protein-protein interaction data.

scientific article

Cancer-associated fibroblast-derived annexin A6+ extracellular vesicles support pancreatic cancer aggressiveness

scientific article published on 04 October 2016

Clust&See: a Cytoscape plugin for the identification, visualization and manipulation of network clusters

scientific article

Cross-talk in host-parasite associations: What do past and recent proteomics approaches tell us?

scientific article published on 22 April 2015

Defining a modular signalling network from the fly interactome.

scientific article

Epi-MEIF: detecting higher order epistatic interactions for complex traits using mixed effect conditional inference forests

scientific article published in 2022

Extreme multifunctional proteins identified from a human protein interaction network.

scientific article published on 9 June 2015

Functional integrative levels in the human interactome recapitulate organ organization

scientific article

Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live

scientific article published on 24 September 2018

Hijacking of host cellular functions by an intracellular parasite, the microsporidian Anncaliia algerae.

scientific article

How pathogens use linear motifs to perturb host cell networks

scientific article

Identifying communities from multiplex biological networks.

scientific article published on 22 December 2015

In silico prediction of protein-protein interactions in human macrophages.

scientific article

Inhibitory activities of short linear motifs underlie Hox interactome specificity in vivo.

scientific article

Integration of quantitative proteomics data and interaction networks: Identification of dysregulated cellular functions during cancer progression.

scientific article

Interactome mapping of the phosphatidylinositol 3-kinase-mammalian target of rapamycin pathway identifies deformed epidermal autoregulatory factor-1 as a new glycogen synthase kinase-3 interactor

scientific article

Logical modelling of Drosophila signalling pathways

scientific article published in September 2013

Met acts through Abl to regulate p53 transcriptional outcomes and cell survival in the developing liver.

scientific article published on 10 August 2012

MetamORF: a repository of unique short open reading frames identified by both experimental and computational approaches for gene and metagene analyses

scientific article published on 17 May 2021

MoonDB 2.0: an updated database of extreme multifunctional and moonlighting proteins

scientific article published in January 2019

Perturbed human sub-networks by Fusobacterium nucleatum candidate virulence proteins.

scientific article published on 10 August 2017

Post-transcriptional regulatory patterns revealed by protein-RNA interactions

PrOnto database : GO term functional dissimilarity inferred from biological data

scientific article

Protein complex scaffolding predicted as a prevalent function of long non-coding RNAs

scientific article published on 20 November 2017

Relationships between predicted moonlighting proteins, human diseases, and comorbidities from a network perspective

scientific article published on 23 June 2015

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

scientific article (publication date: February 2004)

The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets

scientific article

Understanding protein multifunctionality: from short linear motifs to cellular functions

scientific article published on 20 August 2019

List of works by Christine Brun

Approach of the functional evolution of duplicated genes in Saccharomyces cerevisiae using a new classification method based on protein-protein interaction data.

Cancer-associated fibroblast-derived annexin A6+ extracellular vesicles support pancreatic cancer aggressiveness

Clust&See: a Cytoscape plugin for the identification, visualization and manipulation of network clusters

Cross-talk in host-parasite associations: What do past and recent proteomics approaches tell us?

Defining a modular signalling network from the fly interactome.

Epi-MEIF: detecting higher order epistatic interactions for complex traits using mixed effect conditional inference forests

Extreme multifunctional proteins identified from a human protein interaction network.

Functional integrative levels in the human interactome recapitulate organ organization

Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live

Hijacking of host cellular functions by an intracellular parasite, the microsporidian Anncaliia algerae.

How pathogens use linear motifs to perturb host cell networks

Identifying communities from multiplex biological networks.

In silico prediction of protein-protein interactions in human macrophages.

Inhibitory activities of short linear motifs underlie Hox interactome specificity in vivo.

Integration of quantitative proteomics data and interaction networks: Identification of dysregulated cellular functions during cancer progression.

Interactome mapping of the phosphatidylinositol 3-kinase-mammalian target of rapamycin pathway identifies deformed epidermal autoregulatory factor-1 as a new glycogen synthase kinase-3 interactor

Logical modelling of Drosophila signalling pathways

Met acts through Abl to regulate p53 transcriptional outcomes and cell survival in the developing liver.

MetamORF: a repository of unique short open reading frames identified by both experimental and computational approaches for gene and metagene analyses

MoonDB 2.0: an updated database of extreme multifunctional and moonlighting proteins

Perturbed human sub-networks by Fusobacterium nucleatum candidate virulence proteins.

Post-transcriptional regulatory patterns revealed by protein-RNA interactions

PrOnto database : GO term functional dissimilarity inferred from biological data

Protein complex scaffolding predicted as a prevalent function of long non-coding RNAs

Relationships between predicted moonlighting proteins, human diseases, and comorbidities from a network perspective

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets

Understanding protein multifunctionality: from short linear motifs to cellular functions