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List of works by Vincent Lynch

A missense variant in FTCD is associated with arsenic metabolism and toxicity phenotypes in Bangladesh

article

A model based criterion for gene expression calls using RNA-seq data.

scientific article

A molecular footprint of limb loss: sequence variation of the autopodial identity gene Hoxa-13.

scientific article published in December 2008

A stochastic model for the evolution of transcription factor binding site abundance.

scientific article published on 7 March 2007

ACP5 (Uteroferrin): phylogeny of an ancient and conserved gene expressed in the endometrium of mammals

scientific article (publication date: April 2012)

Adaptive changes in the transcription factor HoxA-11 are essential for the evolution of pregnancy in mammals

scientific article (publication date: 30 September 2008)

Adaptive evolution of Hox-gene homeodomains after cluster duplications

scientific article

Adaptive evolution of HoxA-11 and HoxA-13 at the origin of the uterus in mammals

scientific article published in November 2004

Clitoral and penile size variability are not significantly different: lack of evidence for the byproduct theory of the female orgasm

scientific article published in July 2008

Concurrent Evolution of Antiaging Gene Duplications and Cellular Phenotypes in Long-Lived Turtles

scientific article published in 2021

Convergent evolution of endometrial prolactin expression in primates, mice, and elephants through the independent recruitment of transposable elements.

scientific article published on 2 August 2011

Correction: TP53 copy number expansion is associated with the evolution of increased body size and an enhanced DNA damage response in elephants

scientific article

Did egg-laying boas break Dollo's law? Phylogenetic evidence for reversal to oviparity in sand boas (Eryx: Boidae).

scientific article

Evolution of a derived protein-protein interaction between HoxA11 and Foxo1a in mammals caused by changes in intramolecular regulation

scientific article

Evolutionary novelties

scientific article published on 01 January 2010

HoxA-11 and FOXO1A cooperate to regulate decidual prolactin expression: towards inferring the core transcriptional regulators of decidual genes

scientific article published on 03 September 2009

Inventing an arsenal: adaptive evolution and neofunctionalization of snake venom phospholipase A2 genes

scientific article

Live-birth in vipers (Viperidae) is a key innovation and adaptation to global cooling during the Cenozoic

scientific article published on 26 June 2009

Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples

scientific article

Molecular evolution of duplicated ray finned fish HoxA clusters: increased synonymous substitution rate and asymmetrical co-divergence of coding and non-coding sequences.

scientific article published on May 2005

Molecular evolution of evolutionary novelties: the vagina and uterus of therian mammals.

scientific article published in November 2005

Multiple chromosomal rearrangements structured the ancestral vertebrate Hox-bearing protochromosomes

scientific article

Regulatory evolution through divergence of a phosphoswitch in the transcription factor CEBPB.

scientific article published on 13 November 2011

Relaxed constraint and functional divergence of the progesterone receptor (PGR) in the human stem-lineage

scientific article published on 17 April 2020

Resurrecting the role of transcription factor change in developmental evolution.

scientific article published on 28 June 2008

Revisiting a classic example of transcription factor functional equivalence: are Eyeless and Pax6 functionally equivalent or divergent?

scientific article published on 17 September 2010

TP53 copy number expansion is associated with the evolution of increased body size and an enhanced DNA damage response in elephants

scientific article

The "fish-specific" Hox cluster duplication is coincident with the origin of teleosts.

scientific article published on 14 September 2005

The gene regulatory logic of transcription factor evolution

scientific article published on 22 May 2008

Transcriptome and regulatory maps of decidua-derived stromal cells inform gene discovery in preterm birth

scientific article published on 02 December 2020

Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals.

scientific article published on 25 September 2011

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