List of works - Slavica Jonić

3D electron microscopy of biological nanomachines: principles and applications.

scientific article published on 5 July 2007

3D mapping of glycogenosis-causing mutations in the large regulatory alpha subunit of phosphorylase kinase

scientific article

3DEM Loupe: Analysis of macromolecular dynamics using structures from electron microscopy.

scientific article published on 13 May 2013

A multiresolution approach to orientation assignment in 3D electron microscopy of single particles

scientific article published in June 2004

A novel method for improvement of visualization of power spectra for sorting cryo-electron micrographs and their local areas.

scientific article published on 11 August 2006

An Optimized Spline‐Based Registration of a 3D CT to a Set of C‐Arm Images ⬇️

scientific article published on April 6, 2006

Automatic synthesis of synergies for control of reaching--hierarchical clustering.

scientific article

CTF Challenge: Result summary.

scientific article published on 23 April 2015

Comparison of single-particle analysis and electron tomography approaches: an overview.

scientific article published on December 2008

Computational methods for analyzing conformational variability of macromolecular complexes from cryo-electron microscopy images

scientific article published on 11 January 2017

Cryo-electron Microscopy Analysis of Structurally Heterogeneous Macromolecular Complexes

scientific article

Denoising of high-resolution single-particle electron-microscopy density maps by their approximation using three-dimensional Gaussian functions

scientific article published on 13 April 2016

Fast, robust, and accurate determination of transmission electron microscopy contrast transfer function

scientific article published on 29 August 2007

Full-open and closed CFTR channels, with lateral tunnels from the cytoplasm and an alternative position of the F508 region, as revealed by molecular dynamics

scientific article

Hybrid Electron Microscopy Normal Mode Analysis graphical interface and protocol.

scientific article published on 27 September 2014

Hybrid Electron Microscopy Normal Mode Analysis with Scipion

scientific article published on 20 November 2019

Hybrid approach for structural modeling of biological systems from X-ray free electron laser diffraction patterns.

scientific article

Iterative elastic 3D-to-2D alignment method using normal modes for studying structural dynamics of large macromolecular complexes.

scientific article published on 6 February 2014

Local analysis of strains and rotations for macromolecular electron microscopy maps

scientific article published on 18 April 2016

Protein structure determination by electron cryo-microscopy.

scientific article

Radiation-Induced Synthesis and Cryo-TEM Characterization of Silver Nanoshells on Linoleate Spherical Micelles

scientific article published on 15 August 2007

Single-particle XFEL 3D reconstruction of ribosome-size particles based on Fourier slice matching: requirements to reach subnanometer resolution

scientific article published on 30 May 2018

Spline-based image-to-volume registration for three-dimensional electron microscopy

scientific article published on 11 March 2005

StructMap: Elastic Distance Analysis of Electron Microscopy Maps for Studying Conformational Changes

scientific article

The structure of phosphorylase kinase holoenzyme at 9.9 angstroms resolution and location of the catalytic subunit and the substrate glycogen phosphorylase

scientific article

The subnanometer resolution structure of the glutamate synthase 1.2-MDa hexamer by cryoelectron microscopy and its oligomerization behavior in solution: functional implications

scientific article

Three machine learning techniques for automatic determination of rules to control locomotion.

scientific article

Versatility of Approximating Single-Particle Electron Microscopy Density Maps Using Pseudoatoms and Approximation-Accuracy Control

scientific article published on 21 December 2016

List of works by Slavica Jonić

3D electron microscopy of biological nanomachines: principles and applications.

3D mapping of glycogenosis-causing mutations in the large regulatory alpha subunit of phosphorylase kinase

3DEM Loupe: Analysis of macromolecular dynamics using structures from electron microscopy.

A multiresolution approach to orientation assignment in 3D electron microscopy of single particles

A novel method for improvement of visualization of power spectra for sorting cryo-electron micrographs and their local areas.

An Optimized Spline‐Based Registration of a 3D CT to a Set of C‐Arm Images ⬇️

Automatic synthesis of synergies for control of reaching--hierarchical clustering.

CTF Challenge: Result summary.

Comparison of single-particle analysis and electron tomography approaches: an overview.

Computational methods for analyzing conformational variability of macromolecular complexes from cryo-electron microscopy images

Cryo-electron Microscopy Analysis of Structurally Heterogeneous Macromolecular Complexes

Denoising of high-resolution single-particle electron-microscopy density maps by their approximation using three-dimensional Gaussian functions

Fast, robust, and accurate determination of transmission electron microscopy contrast transfer function

Full-open and closed CFTR channels, with lateral tunnels from the cytoplasm and an alternative position of the F508 region, as revealed by molecular dynamics

Hybrid Electron Microscopy Normal Mode Analysis graphical interface and protocol.

Hybrid Electron Microscopy Normal Mode Analysis with Scipion

Hybrid approach for structural modeling of biological systems from X-ray free electron laser diffraction patterns.

Iterative elastic 3D-to-2D alignment method using normal modes for studying structural dynamics of large macromolecular complexes.

Local analysis of strains and rotations for macromolecular electron microscopy maps

Protein structure determination by electron cryo-microscopy.

Radiation-Induced Synthesis and Cryo-TEM Characterization of Silver Nanoshells on Linoleate Spherical Micelles

Single-particle XFEL 3D reconstruction of ribosome-size particles based on Fourier slice matching: requirements to reach subnanometer resolution

Spline-based image-to-volume registration for three-dimensional electron microscopy

StructMap: Elastic Distance Analysis of Electron Microscopy Maps for Studying Conformational Changes

The structure of phosphorylase kinase holoenzyme at 9.9 angstroms resolution and location of the catalytic subunit and the substrate glycogen phosphorylase

The subnanometer resolution structure of the glutamate synthase 1.2-MDa hexamer by cryoelectron microscopy and its oligomerization behavior in solution: functional implications

Three machine learning techniques for automatic determination of rules to control locomotion.

Versatility of Approximating Single-Particle Electron Microscopy Density Maps Using Pseudoatoms and Approximation-Accuracy Control