List of works - Rudiger Brauning

A multiway analysis for identifying high integrity bovine BACs.

scientific article

A physical map of the bovine genome

scientific article published in January 2007

An entropy-reducing data representation approach for bioinformatic data

scientific article published in January 2018

An ovine hepatorenal fibrocystic model of a Meckel-like syndrome associated with dysmorphic primary cilia and TMEM67 mutations

scientific article

Analyses of hypomethylated oil palm gene space

scientific article published on 30 January 2014

Aotearoa genomic data repository: An āhuru mōwai for taonga species sequencing data

scientific article published on 15 September 2023

Beyond the genome: a perspective on the use of DNA methylation profiles as a tool for the livestock industry

scientific article published in December 2021

Brain urea increase is an early Huntington's disease pathogenic event observed in a prodromal transgenic sheep model and HD cases

scientific article published on 11 December 2017

Complete Genome Sequence of the Telford Type S Strain of Mycobacterium avium subsp. paratuberculosis

scientific article published on 14 March 2019

Construction of relatedness matrices using genotyping-by-sequencing data.

scientific article

Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

scientific article

Copy number variants in the sheep genome detected using multiple approaches

scientific article

Development of a predicted physical map of microsatellite locus positions for pinnipeds, with wider applicability to the Carnivora

article

Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

scientific article

Exclusion and Genomic Relatedness Methods for Assignment of Parentage Using Genotyping-by-Sequencing Data

scientific article published on 07 October 2019

Genome-wide DNA methylation analysis: no evidence for stable hemimethylation in the sheep muscle genome

scientific article published on 6 February 2015

Genome-wide DNA methylation patterns and transcription analysis in sheep muscle

scientific article

Genomic signatures of inbreeding in a critically endangered parrot, the kākāpō

scientific article published on 31 August 2021

Identifying chromosomal selection-sweep regions in facial eczema selection-line animals using an ovine 50K-SNP array

scientific article published on 13 February 2014

Linkage Disequilibrium Estimation in Low Coverage High-Throughput Sequencing Data.

scientific article published on 27 March 2018

Linkage disequilibrium over short physical distances measured in sheep using a high-density SNP chip

scientific article published on 17 July 2014

Mutations in the leptin receptor gene associated with delayed onset of puberty are also associated with decreased ovulation and lambing rates in prolific Davisdale sheep

article

Ovine keratome: identification, localisation and genomic organisation of keratin and keratin-associated proteins

scientific article published on 30 July 2018

PATH: a task for the inference of phylogenies.

scientific article

Population Connectivity and Traces of Mitochondrial Introgression in New Zealand Black-Billed Gulls (Larus bulleri)

article

Resolving the evolution of extant and extinct ruminants with high-throughput phylogenomics

scientific article (publication date: 3 November 2009)

SNP discovery and population structure analysis in Lassi and Marecha camel breeds using a genotyping by sequencing method

scientific article published on 18 May 2020

SNPchiMp v.3: integrating and standardizing single nucleotide polymorphism data for livestock species

scientific article

SOLiD SAGE sequencing shows differential gene expression in jejunal lymph node samples of resistant and susceptible red deer (Cervus elaphus) challenged with Mycobacterium avium subsp. paratuberculosis

scientific article

Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds

scientific article published on 28 February 2018

Single-nucleotide polymorphisms in the LEPR gene are associated with divergent phenotypes for age at onset of puberty in Davisdale ewes.

scientific article published on 20 February 2014

The accuracy, feasibility and challenges of sequencing short tandem repeats using next-generation sequencing platforms

scientific article

The constituents of Microctonus sp. parasitoid venoms

scientific article

The effects of transcription and recombination on mutational dynamics of short tandem repeats

scientific article published on 29 December 2017

The sheep genome illuminates biology of the rumen and lipid metabolism

scientific article

Using genotyping-by-sequencing to predict gender in animals

scientific article published on 07 April 2019

Whole Genome Sequencing for Determining the Source of Mycobacterium bovis Infections in Livestock Herds and Wildlife in New Zealand

article

List of works by Rudiger Brauning

A multiway analysis for identifying high integrity bovine BACs.

A physical map of the bovine genome

An entropy-reducing data representation approach for bioinformatic data

An ovine hepatorenal fibrocystic model of a Meckel-like syndrome associated with dysmorphic primary cilia and TMEM67 mutations

Analyses of hypomethylated oil palm gene space

Aotearoa genomic data repository: An āhuru mōwai for taonga species sequencing data

Beyond the genome: a perspective on the use of DNA methylation profiles as a tool for the livestock industry

Brain urea increase is an early Huntington's disease pathogenic event observed in a prodromal transgenic sheep model and HD cases

Complete Genome Sequence of the Telford Type S Strain of Mycobacterium avium subsp. paratuberculosis

Construction of relatedness matrices using genotyping-by-sequencing data.

Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

Copy number variants in the sheep genome detected using multiple approaches

Development of a predicted physical map of microsatellite locus positions for pinnipeds, with wider applicability to the Carnivora

Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

Exclusion and Genomic Relatedness Methods for Assignment of Parentage Using Genotyping-by-Sequencing Data

Genome-wide DNA methylation analysis: no evidence for stable hemimethylation in the sheep muscle genome

Genome-wide DNA methylation patterns and transcription analysis in sheep muscle

Genomic signatures of inbreeding in a critically endangered parrot, the kākāpō

Identifying chromosomal selection-sweep regions in facial eczema selection-line animals using an ovine 50K-SNP array

Linkage Disequilibrium Estimation in Low Coverage High-Throughput Sequencing Data.

Linkage disequilibrium over short physical distances measured in sheep using a high-density SNP chip

Mutations in the leptin receptor gene associated with delayed onset of puberty are also associated with decreased ovulation and lambing rates in prolific Davisdale sheep

Ovine keratome: identification, localisation and genomic organisation of keratin and keratin-associated proteins

PATH: a task for the inference of phylogenies.

Population Connectivity and Traces of Mitochondrial Introgression in New Zealand Black-Billed Gulls (Larus bulleri)

Resolving the evolution of extant and extinct ruminants with high-throughput phylogenomics

SNP discovery and population structure analysis in Lassi and Marecha camel breeds using a genotyping by sequencing method

SNPchiMp v.3: integrating and standardizing single nucleotide polymorphism data for livestock species

SOLiD SAGE sequencing shows differential gene expression in jejunal lymph node samples of resistant and susceptible red deer (Cervus elaphus) challenged with Mycobacterium avium subsp. paratuberculosis

Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds

Single-nucleotide polymorphisms in the LEPR gene are associated with divergent phenotypes for age at onset of puberty in Davisdale ewes.

The accuracy, feasibility and challenges of sequencing short tandem repeats using next-generation sequencing platforms

The constituents of Microctonus sp. parasitoid venoms

The effects of transcription and recombination on mutational dynamics of short tandem repeats

The sheep genome illuminates biology of the rumen and lipid metabolism

Using genotyping-by-sequencing to predict gender in animals

Whole Genome Sequencing for Determining the Source of Mycobacterium bovis Infections in Livestock Herds and Wildlife in New Zealand