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List of works by Mohammad R. K. Mofrad

A Disulfide Bond Is Required for the Transmission of Forces through SUN-KASH Complexes

scientific article

A computational model of aging and calcification in the aortic heart valve

scientific article

A molecular dynamics investigation of vinculin activation

scientific article

A molecular trajectory of α-actinin activation

scientific article

A splice acceptor variant in HLA-DRA affects the conformation and cellular localization of the class II DR alpha-chain

scientific article published on 28 September 2020

A sub-cellular viscoelastic model for cell population mechanics

scientific article

Accounting for diffusion in agent based models of reaction-diffusion systems with application to cytoskeletal diffusion

scientific article

Actin reorganization through dynamic interactions with single-wall carbon nanotubes.

scientific article published on 24 December 2013

Altered cell mechanics from the inside: dispersed single wall carbon nanotubes integrate with and restructure actin

scientific article

An efficient two-stage approach for image-based FSI analysis of atherosclerotic arteries.

scientific article

Averaged implicit hydrodynamic model of semiflexible filaments

scientific article published on 26 March 2010

Bacterial Networks on Hydrophobic Micropillars

scientific article

Biomechanical properties of native and tissue engineered heart valve constructs.

scientific article published on 21 October 2013

Brownian dynamics simulation of nucleocytoplasmic transport: a coarse-grained model for the functional state of the nuclear pore complex

scientific article (publication date: June 2011)

Buckling behavior of individual and bundled microtubules.

scientific article

Cell adhesion and detachment on gold surfaces modified with a thiol-functionalized RGD peptide

scientific article published on 3 August 2011

Computational modeling of axonal microtubule bundles under tension.

scientific article published on 21 February 2012

Consistent trilayer biomechanical modeling of aortic valve leaflet tissue

scientific article published on 9 August 2017

Cooperation within von Willebrand factors enhances adsorption mechanism

scientific article

Coupled Simulation of Heart Valves: Applications to Clinical Practice.

scientific article published on 23 June 2015

Deep echocardiography: data-efficient supervised and semi-supervised deep learning towards automated diagnosis of cardiac disease

scientific article published on 18 October 2018

Directional migration and differentiation of neural stem cells within three-dimensional microenvironments.

scientific article published on 30 January 2015

Emerging Trends in Heart Valve Engineering: Part IV. Computational Modeling and Experimental Studies.

scientific article published on 30 July 2015

Emerging trends in heart valve engineering: Part I. Solutions for future.

scientific article published on 09 December 2014

Emerging trends in heart valve engineering: Part II. Novel and standard technologies for aortic valve replacement.

scientific article

Emerging trends in heart valve engineering: Part III. Novel technologies for mitral valve repair and replacement.

scientific article published on 07 October 2014

Enhanced HP1α homodimer interaction <i>via</i> force-induced salt bridge formation: implications for chromatin crosslinking and phase separation

scientific article published in 2024

Fast and accurate view classification of echocardiograms using deep learning

scientific article published on 21 March 2018

Force-induced activation of talin and its possible role in focal adhesion mechanotransduction.

scientific article published in January 2007

Gelatin/chondroitin sulfate nanofibrous scaffolds for stimulation of wound healing: In-vitro and in-vivo study

scientific article published on 2 September 2016

Higher nucleoporin-Importinβ affinity at the nuclear basket increases nucleocytoplasmic import

scientific article

Killer Cell Immunoglobulin-like Receptor Variants Are Associated with Protection from Symptoms Associated with More Severe Course in Parkinson Disease

scientific article published on 24 July 2020

Localized lipid packing of transmembrane domains impedes integrin clustering

scientific article published on 14 March 2013

Looking "Under the Hood" of Cellular Mechanotransduction with Computational Tools: A Systems Biomechanics Approach across Multiple Scales

scientific article published on 29 June 2017

Mechanical Contact Characteristics of PC3 Human Prostate Cancer Cells on Complex-Shaped Silicon Micropillars.

scientific article published on 2 August 2017

Mechanics and deformation of the nucleus in micropipette aspiration experiment.

scientific article published on 16 November 2006

Mechanosensitive Conformation of Vinculin Regulates Its Binding to MAPK1.

scientific article published on May 2017

Mechanotransduction: a major regulator of homeostasis and development

scientific article

Molecular mechanics of Staphylococcus aureus adhesin, CNA, and the inhibition of bacterial adhesion by stretching collagen.

scientific article

Molecular mechanics of filamin's rod domain

scientific article published on 5 October 2007

Molecular mechanics of the alpha-actinin rod domain: bending, torsional, and extensional behavior

scientific article

Multiscale Systems Biology Model of Calcific Aortic Valve Disease Progression

scientific article published on 27 June 2017

Nanoscale integrin cluster dynamics controls cellular mechanosensing via FAKY397 phosphorylation

scientific article published on 04 March 2020

Nucleoporin's Like Charge Regions Are Major Regulators of FG Coverage and Dynamics Inside the Nuclear Pore Complex

scientific article (publication date: 2015)

On the activation of integrin αIIbβ3: outside-in and inside-out pathways

scientific article published on September 2013

On the cytoskeleton and soft glassy rheology.

scientific article published on 09 April 2008

On the multiscale modeling of heart valve biomechanics in health and disease

scientific article published on 12 January 2010

On the octagonal structure of the nuclear pore complex: insights from coarse-grained models.

scientific article

On the significance of microtubule flexural behavior in cytoskeletal mechanics

scientific article

Phosphorylation primes vinculin for activation

scientific article published in May 2012

Probabilistic variable-length segmentation of protein sequences for discriminative motif discovery (DiMotif) and sequence embedding (ProtVecX)

scientific article published on 05 March 2019

Responses of Staphylococcus aureus bacterial cells to nanocrystalline nickel nanostructures.

scientific article published on 24 February 2014

Rods-on-string idealization captures semiflexible filament dynamics

scientific article published on 13 January 2009

Sex-specific Tau methylation patterns and synaptic transcriptional alterations are associated with neural vulnerability during chronic neuroinflammation

scientific article published on 19 April 2019

The LINC and NPC relationship - it's complicated!

scientific article published on 16 August 2016

The interaction of RNA helicase DDX3 with HIV-1 Rev-CRM1-RanGTP complex during the HIV replication cycle

scientific article

The interaction of vinculin with actin.

scientific article

Tissue elasticity estimation with optical coherence elastography: toward mechanical characterization of in vivo soft tissue

scientific article published in November 2005

Torsional behavior of axonal microtubule bundles

scientific article

Vinculin activation is necessary for complete talin binding

scientific article

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