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List of works by Mingxiang Teng

A benchmark for RNA-seq quantification pipelines

scientific article

A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer.

scientific article

A practical guide to methods controlling false discoveries in computational biology.

scientific article published on 4 June 2019

Accounting for GC-content bias reduces systematic errors and batch effects in ChIP-seq data

scientific article published on 12 October 2017

CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation

scientific article published on 01 July 2019

CYB561A3 is the key lysosomal iron reductase required for Burkitt B-cell growth and survival

scientific article published on 2 December 2021

Chromatin structure characteristics of pre-miRNA genomic sequences

scientific article published on June 25, 2011

DNA methylation enzymes and PRC1 restrict B-cell Epstein-Barr virus oncoprotein expression

scientific article published on 18 May 2020

Empirical Bayes Model Comparisons for Differential Methylation Analysis

scientific article published on August 22, 2012

Family genome browser: visualizing genomes with pedigree information.

scientific article published on 18 March 2015

Genome-wide CRISPR-based gene knockout screens reveal cellular factors and pathways essential for nasopharyngeal carcinoma

scientific article published on 09 May 2019

Histone Loaders CAF1 and HIRA Restrict Epstein-Barr Virus B-Cell Lytic Reactivation

scientific article published on 27 October 2020

Identification of regulatory regions of bidirectional genes in cervical cancer

scientific article

MYC Controls the Epstein-Barr Virus Lytic Switch

scientific article published on 03 April 2020

Missing data and technical variability in single-cell RNA-sequencing experiments

scientific article

Modeling and correct the GC bias of tumor and normal WGS data for SCNA based tumor subclonal population inferring.

scientific article published on 11 April 2018

Prioritization of disease microRNAs through a human phenome-microRNAome network

scientific article

Prioritizing single-nucleotide variations that potentially regulate alternative splicing

scientific article

RNA Sequencing Analyses of Gene Expression during Epstein-Barr Virus Infection of Primary B Lymphocytes

scientific article published on 14 June 2019

Resistance to targeted therapies as a multifactorial, gradual adaptation to inhibitor specific selective pressures

scientific article published on 14 May 2020

SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters

scientific article

Signal transducers and activators of transcription-1 (STAT1) regulates microRNA transcription in interferon gamma-stimulated HeLa cells

scientific article

Summarizing internal dynamics boosts differential analysis and functional interpretation of super enhancers

scientific article published on 01 April 2022

TAF Family Proteins and MEF2C Are Essential for Epstein-Barr Virus Super-Enhancer Activity

scientific article published on 30 July 2019

Targeting casein kinase 1 delta sensitizes pancreatic and bladder cancer cells to gemcitabine treatment by upregulating deoxycytidine kinase

scientific article published on 19 May 2020

The influence of cis-regulatory elements on DNA methylation fidelity

scientific article

The personal genome browser: visualizing functions of genetic variants

scientific article

WDNfinder: A method for minimum driver node set detection and analysis in directed and weighted biological network

scientific article published on 4 September 2017

rHAT: fast alignment of noisy long reads with regional hashing

scientific article

regSNPs: a strategy for prioritizing regulatory single nucleotide substitutions

scientific article